RNA–Protein interactions for RNA: ENST00000537033.1

SYNE1-235, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 4

Gene SYNE1, Length 647 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-235ENST00000537033 DEFB130AP0DP74 79 aa9.86□□□□□ -0.83
SYNE1-235ENST00000537033 CXCL3P19876 107 aa9.86□□□□□ -0.83
SYNE1-235ENST00000537033 TAS2R30P59541 319 aa9.86□□□□□ -0.83
SYNE1-235ENST00000537033 SLC38A11Q08AI6 406 aa9.86□□□□□ -0.83
SYNE1-235ENST00000537033 PSG3Q16557 428 aa9.86□□□□□ -0.83
SYNE1-235ENST00000537033 CNPY1Q3B7I2 92 aa9.86□□□□□ -0.83
SYNE1-235ENST00000537033 LINC01587Q99440 93 aa9.86□□□□□ -0.83
SYNE1-235ENST00000537033 ATG101Q9BSB4 218 aa9.86□□□□□ -0.83
SYNE1-235ENST00000537033 KRTAP17-1Q9BYP8 105 aa9.86□□□□□ -0.83
SYNE1-235ENST00000537033 ARV1Q9H2C2 271 aa9.86□□□□□ -0.83
SYNE1-235ENST00000537033 CXCL2P19875 107 aa9.85□□□□□ -0.83
SYNE1-235ENST00000537033 FAM3BP58499 235 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-235ENST00000537033 ZNF846Q147U1 533 aa9.85□□□□□ -0.83
SYNE1-235ENST00000537033 LCN15Q6UWW0 184 aa9.85□□□□□ -0.83
SYNE1-235ENST00000537033 ZBTB8BQ8NAP8 495 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-235ENST00000537033 GGACTQ9BVM4 153 aa9.85□□□□□ -0.83
SYNE1-235ENST00000537033 L7N2F9 121 aa9.84□□□□□ -0.83
SYNE1-235ENST00000537033 COX7A2P2O60397 106 aa9.84□□□□□ -0.83
SYNE1-235ENST00000537033 HTN1P15515 57 aa9.84□□□□□ -0.83
SYNE1-235ENST00000537033 TAS2R60P59551 318 aa9.84□□□□□ -0.83
SYNE1-235ENST00000537033 VAMP2P63027 116 aa9.84□□□□□ -0.83
SYNE1-235ENST00000537033 Q6ZR54 194 aa9.84□□□□□ -0.83
SYNE1-235ENST00000537033 LINC00305Q7Z4B0 112 aa9.84□□□□□ -0.83
SYNE1-235ENST00000537033 BPIFA4PQ86YQ2 179 aa9.84□□□□□ -0.83
SYNE1-235ENST00000537033 MITD1Q8WV92 249 aa9.84□□□□□ -0.83
SYNE1-235ENST00000537033 RPUSD4Q96CM3 377 aaKnown RBP9.84□□□□□ -0.83
SYNE1-235ENST00000537033 C16orf74Q96GX8 76 aa9.84□□□□□ -0.83
SYNE1-235ENST00000537033 SLC50A1Q9BRV3 221 aa9.84□□□□□ -0.83
SYNE1-235ENST00000537033 RCL1Q9Y2P8 373 aaKnown RBP9.84□□□□□ -0.83
SYNE1-235ENST00000537033 NACAE9PAV3 2078 aa9.84□□□□□ -0.83
SYNE1-235ENST00000537033 F5H768 121 aa9.83□□□□□ -0.84
SYNE1-235ENST00000537033 AGPAT2O15120 278 aa9.83□□□□□ -0.84
SYNE1-235ENST00000537033 PRM2P04554 102 aa9.83□□□□□ -0.84
SYNE1-235ENST00000537033 ATP5G1P05496 136 aa9.83□□□□□ -0.84
SYNE1-235ENST00000537033 MED14OSP0DP75 135 aa9.83□□□□□ -0.84
SYNE1-235ENST00000537033 BTCP35070 178 aa9.83□□□□□ -0.84
SYNE1-235ENST00000537033 CDKN1BP46527 198 aa9.83□□□□□ -0.84
SYNE1-235ENST00000537033 ATP5G3P48201 142 aa9.83□□□□□ -0.84
SYNE1-235ENST00000537033 RAB31Q13636 194 aa9.83□□□□□ -0.84
SYNE1-235ENST00000537033 C1orf134Q5TEV5 83 aa9.83□□□□□ -0.84
SYNE1-235ENST00000537033 MBPP02686 304 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-235ENST00000537033 IL7P13232 177 aa9.82□□□□□ -0.84
SYNE1-235ENST00000537033 PATE2Q6UY27 113 aa9.82□□□□□ -0.84
SYNE1-235ENST00000537033 C20orf85Q9H1P6 137 aa9.82□□□□□ -0.84
SYNE1-235ENST00000537033 ZNF331Q9NQX6 463 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-235ENST00000537033 TIMM8BQ9Y5J9 83 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-235ENST00000537033 C7orf66A4D0T2 115 aa9.81□□□□□ -0.84
SYNE1-235ENST00000537033 CBY3A6NI87 242 aa9.81□□□□□ -0.84
SYNE1-235ENST00000537033 FAM25EA8MYX2 175 aa9.81□□□□□ -0.84
SYNE1-235ENST00000537033 H7BYZ3 331 aa9.81□□□□□ -0.84
SYNE1-235ENST00000537033 NUDT3O95989 172 aa9.81□□□□□ -0.84
SYNE1-235ENST00000537033 AZU1P20160 251 aa9.81□□□□□ -0.84
SYNE1-235ENST00000537033 BCAP31P51572 246 aa9.81□□□□□ -0.84
SYNE1-235ENST00000537033 C10orf113Q5VZT2 155 aa9.81□□□□□ -0.84
SYNE1-235ENST00000537033 ZNF493Q6ZR52 646 aa9.81□□□□□ -0.84
SYNE1-235ENST00000537033 OR10J6PQ8NGY7 276 aa9.81□□□□□ -0.84
SYNE1-235ENST00000537033 TMEM263Q8WUH6 116 aaKnown RBP9.81□□□□□ -0.84
SYNE1-235ENST00000537033 SDHCQ99643 169 aaPredicted RBP9.81□□□□□ -0.84
SYNE1-235ENST00000537033 MGST2Q99735 147 aa9.81□□□□□ -0.84
SYNE1-235ENST00000537033 PXMP4Q9Y6I8 212 aa9.81□□□□□ -0.84
SYNE1-235ENST00000537033 PLAC8L1A1L4L8 177 aa9.8□□□□□ -0.84
SYNE1-235ENST00000537033 CCSO14618 274 aa9.8□□□□□ -0.84
SYNE1-235ENST00000537033 MRPS12O15235 138 aaKnown RBP9.8□□□□□ -0.84
SYNE1-235ENST00000537033 PVALBP20472 110 aaPredicted RBP9.8□□□□□ -0.84
SYNE1-235ENST00000537033 CAMLGP49069 296 aa9.8□□□□□ -0.84
SYNE1-235ENST00000537033 CAV2P51636 162 aa9.8□□□□□ -0.84
SYNE1-235ENST00000537033 CCL18P55774 89 aa9.8□□□□□ -0.84
SYNE1-235ENST00000537033 ARL16Q0P5N6 197 aa9.8□□□□□ -0.84
SYNE1-235ENST00000537033 FCN2Q15485 313 aa9.8□□□□□ -0.84
SYNE1-235ENST00000537033 Q6ZRG5 221 aa9.8□□□□□ -0.84
SYNE1-235ENST00000537033 C20orf144Q9BQM9 153 aa9.8□□□□□ -0.84
SYNE1-235ENST00000537033 LSM5Q9Y4Y9 91 aaKnown RBP9.8□□□□□ -0.84
SYNE1-235ENST00000537033 C5orf51A6NDU8 294 aa9.79□□□□□ -0.84
SYNE1-235ENST00000537033 LYRM1O43325 122 aa9.79□□□□□ -0.84
SYNE1-235ENST00000537033 SNRPCP09234 159 aaKnown RBP9.79□□□□□ -0.84
SYNE1-235ENST00000537033 PRB4P10163 310 aaPredicted RBP9.79□□□□□ -0.84
SYNE1-235ENST00000537033 CCDC28AQ8IWP9 274 aa9.79□□□□□ -0.84
SYNE1-235ENST00000537033 OR1L4Q8NGR5 311 aa9.79□□□□□ -0.84
SYNE1-235ENST00000537033 PFDN5Q99471 154 aa9.79□□□□□ -0.84
SYNE1-235ENST00000537033 HERC2O95714 4834 aa9.79□□□□□ -0.84
SYNE1-235ENST00000537033 H3BTX0 84 aa9.78□□□□□ -0.84
SYNE1-235ENST00000537033 CLINT1Q14677 625 aa9.78□□□□□ -0.84
SYNE1-235ENST00000537033 OPCMLQ14982 345 aa9.78□□□□□ -0.84
SYNE1-235ENST00000537033 GUK1Q16774 197 aa9.78□□□□□ -0.84
SYNE1-235ENST00000537033 NRARPQ7Z6K4 114 aa9.78□□□□□ -0.84
SYNE1-235ENST00000537033 RNASE8Q8TDE3 154 aaKnown RBP9.78□□□□□ -0.84
SYNE1-235ENST00000537033 TMEM37Q8WXS4 190 aa9.78□□□□□ -0.84
SYNE1-235ENST00000537033 DNAJC4Q9NNZ3 241 aa9.78□□□□□ -0.84
SYNE1-235ENST00000537033 NOP10Q9NPE3 64 aaKnown RBP9.78□□□□□ -0.84
SYNE1-235ENST00000537033 UQCC1Q9NVA1 299 aa9.78□□□□□ -0.84
SYNE1-235ENST00000537033 TRAV6A0A075B6T7 132 aa9.77□□□□□ -0.85
SYNE1-235ENST00000537033 SLC17A3O00476 420 aa9.77□□□□□ -0.85
SYNE1-235ENST00000537033 CST7O76096 145 aa9.77□□□□□ -0.85
SYNE1-235ENST00000537033 TCRBP04435 133 aa9.77□□□□□ -0.85
SYNE1-235ENST00000537033 IGLC2P0DOY2 106 aa9.77□□□□□ -0.85
SYNE1-235ENST00000537033 LEPP41159 167 aa9.77□□□□□ -0.85
SYNE1-235ENST00000537033 ZNF431Q8TF32 576 aaPredicted RBP9.77□□□□□ -0.85
SYNE1-235ENST00000537033 NUDT15Q9NV35 164 aa9.77□□□□□ -0.85
SYNE1-235ENST00000537033 PTTG2Q9NZH5 202 aa9.77□□□□□ -0.85
SYNE1-235ENST00000537033 NBDYA0A0U1RRE5 68 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms