RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 MRPL23Q16540 153 aaKnown RBP4.38□□□□□ -1.71
PTPRD-213ENST00000537002 FAM214BQ7L5A3 538 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 ZNF524Q96C55 264 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 FBXL15Q9H469 300 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 A0A1W2PQM1 296 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 TMEM213A2RRL7 107 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 C9orf153Q5TBE3 101 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 SPAG8Q99932 426 aaPredicted RBP4.38□□□□□ -1.71
PTPRD-213ENST00000537002 IGKV2-40A0A087WW87 121 aaPredicted RBP4.37□□□□□ -1.71
PTPRD-213ENST00000537002 TRAV17A0A0B4J275 112 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 NKX2-8O15522 239 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 IGKV2D-40P01614 121 aaPredicted RBP4.37□□□□□ -1.71
PTPRD-213ENST00000537002 CFHR2P36980 270 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 LAGE3Q14657 143 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 C8orf86Q6ZUL3 223 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 SH2D6Q7Z4S9 175 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 TP73-AS1Q9UF72 201 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 PSPNO60542 156 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 C2orf91Q6ZV80 131 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 NUP37Q8NFH4 326 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 EDA2RQ9HAV5 297 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 GGTLC3B5MD39 225 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 K7EMI3 77 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 FOXG1P55316 489 aaPredicted RBP4.37□□□□□ -1.71
PTPRD-213ENST00000537002 PRB3Q04118 309 aaPredicted RBP4.37□□□□□ -1.71
PTPRD-213ENST00000537002 C2orf82Q6UX34 121 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 METTL26Q96S19 204 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 SH2D1AO60880 128 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 FRMD6-AS1P0C7T7 363 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 METRNQ9UJH8 293 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 CIRBPQ14011 172 aaKnown RBP4.37□□□□□ -1.71
PTPRD-213ENST00000537002 C19orf54Q5BKX5 351 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 ZNF562Q6V9R5 426 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 IGLV3-19P01714 112 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 IFITM1P13164 125 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 ATXN8Q156A1 80 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 GTF3C1Q12789 2109 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 NPIPB5A8MRT5 1133 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 DNAL4O96015 105 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 SLC25A45Q8N413 288 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 NEU4Q8WWR8 484 aaPredicted RBP4.37□□□□□ -1.71
PTPRD-213ENST00000537002 FAM168AQ92567 244 aa4.37□□□□□ -1.71
PTPRD-213ENST00000537002 C17orf82Q86X59 251 aaPredicted RBP4.36□□□□□ -1.71
PTPRD-213ENST00000537002 OR13C6PQ8NH95 151 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 PRSS22Q9GZN4 317 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 RPUSD1Q9UJJ7 312 aaKnown RBP4.36□□□□□ -1.71
PTPRD-213ENST00000537002 ID1P41134 155 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 MSRB2Q9Y3D2 182 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 PPP1R17O96001 155 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 LYPD1Q8N2G4 141 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 ESPL1Q14674 2120 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 PRSS46E5RG02 174 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 PAPPA-AS1Q5QFB9 102 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 CEND1Q8N111 149 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 Q8N7P7 452 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 IQCF6A8MYZ5 107 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 PLNP26678 52 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 ORMDL2Q53FV1 153 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 IGFL4Q6B9Z1 124 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 TEN1Q86WV5 123 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 Q8TAT8 98 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 ABHD17AQ96GS6 310 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 SLC25A39Q9BZJ4 359 aaPredicted RBP4.36□□□□□ -1.71
PTPRD-213ENST00000537002 FABP5P3A8MUU1 101 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 NPIPB6E9PJ23 425 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 SAP25Q8TEE9 199 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 RNF125Q96EQ8 232 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 RNF114Q9Y508 228 aa4.36□□□□□ -1.71
PTPRD-213ENST00000537002 IGKV3D-20A0A0C4DH25 116 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 CCL3L1P16619 93 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 RNASE4P34096 147 aaKnown RBP4.35□□□□□ -1.71
PTPRD-213ENST00000537002 RRN3P1Q2M238 152 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 PCP2Q8IVA1 136 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 DKK2Q9UBU2 259 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 ZNF493Q6ZR52 646 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 TRAV8-3A0A0A6YYJ7 113 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 IGHG4P01861 327 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 FAM120AOSQ5T036 256 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 ZNF688P0C7X2 276 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 TCF15Q12870 199 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 PPP1R27Q86WC6 154 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 IGKV3OR2-268A0A0C4DH90 116 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 FAM186AA6NE01 2351 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 FAM90A27PA6NNH2 459 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 H7C1H1 209 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 M0R2P5 195 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 CECR9P0C854 216 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 FGF6P10767 208 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 SUMO2P61956 95 aaKnown RBP4.35□□□□□ -1.71
PTPRD-213ENST00000537002 EIF4EBP1Q13541 118 aaPredicted RBP4.35□□□□□ -1.71
PTPRD-213ENST00000537002 CD177Q8N6Q3 437 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 UNC13CQ8NB66 2214 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 TRBV7-9A0A0J9YWB2 115 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 IGLV2-8P01709 118 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 FOXI1Q12951 378 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 GFRALQ6UXV0 394 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 GLMPQ8WWB7 406 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 A0A0U1RRA0 63 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 IGLV2-14P01704 120 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 ATP5G2Q06055 141 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms