RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 C15orf32Q32M92 178 aa10.61□□□□□ -0.71
SMG6-203ENST00000536871 FAM223AQ8IWN6 122 aa10.61□□□□□ -0.71
SMG6-203ENST00000536871 RPH3ALQ9UNE2 315 aa10.61□□□□□ -0.71
SMG6-203ENST00000536871 C19orf71A6NCJ1 209 aa10.61□□□□□ -0.71
SMG6-203ENST00000536871 H3BUA1 57 aa10.61□□□□□ -0.71
SMG6-203ENST00000536871 ZNF705AQ6ZN79 300 aaPredicted RBP10.61□□□□□ -0.71
SMG6-203ENST00000536871 TMEM136Q6ZRR5 245 aa10.61□□□□□ -0.71
SMG6-203ENST00000536871 NHLRC2Q8NBF2 726 aa10.61□□□□□ -0.71
SMG6-203ENST00000536871 OR2T8A6NH00 312 aa10.6□□□□□ -0.71
SMG6-203ENST00000536871 NPIPB6E9PJ23 425 aa10.6□□□□□ -0.71
SMG6-203ENST00000536871 PRR27Q6MZM9 219 aa10.6□□□□□ -0.71
SMG6-203ENST00000536871 GOLT1AQ6ZVE7 132 aa10.6□□□□□ -0.71
SMG6-203ENST00000536871 PLXNB1O43157 2135 aa10.6□□□□□ -0.71
SMG6-203ENST00000536871 TRAV40A0A0B4J280 105 aa10.59□□□□□ -0.71
SMG6-203ENST00000536871 PPBPP02775 128 aa10.59□□□□□ -0.71
SMG6-203ENST00000536871 COX6B1P14854 86 aa10.59□□□□□ -0.71
SMG6-203ENST00000536871 TPPP2P59282 170 aa10.59□□□□□ -0.71
SMG6-203ENST00000536871 RPS20P60866 119 aaKnown RBP10.59□□□□□ -0.71
SMG6-203ENST00000536871 PSG3Q16557 428 aa10.59□□□□□ -0.71
SMG6-203ENST00000536871 EXOC3-AS1Q8N2X6 119 aa10.59□□□□□ -0.71
SMG6-203ENST00000536871 NUP35Q8NFH5 326 aa10.59□□□□□ -0.71
SMG6-203ENST00000536871 MS4A10Q96PG2 267 aa10.59□□□□□ -0.71
SMG6-203ENST00000536871 SPTBN1Q01082 2364 aaKnown RBP10.59□□□□□ -0.71
SMG6-203ENST00000536871 IGHV4-30-2A0A087WSY4 118 aa10.59□□□□□ -0.71
SMG6-203ENST00000536871 TRAV41A0A0B4J266 112 aa10.59□□□□□ -0.71
SMG6-203ENST00000536871 C20orf202A1L168 122 aa10.59□□□□□ -0.71
SMG6-203ENST00000536871 DIRC3C9JPN6 131 aa10.59□□□□□ -0.71
SMG6-203ENST00000536871 IGF1P05019 195 aa10.59□□□□□ -0.71
SMG6-203ENST00000536871 COL8A1P27658 744 aa10.59□□□□□ -0.71
SMG6-203ENST00000536871 TCL1AP56279 114 aa10.59□□□□□ -0.71
SMG6-203ENST00000536871 CHD8Q9HCK8 2581 aa10.58□□□□□ -0.72
SMG6-203ENST00000536871 A0A087X0K7 114 aa10.58□□□□□ -0.72
SMG6-203ENST00000536871 HIGD1CA8MV81 97 aa10.58□□□□□ -0.72
SMG6-203ENST00000536871 J3QLI3 93 aa10.58□□□□□ -0.72
SMG6-203ENST00000536871 IGLV2-11P01706 119 aa10.58□□□□□ -0.72
SMG6-203ENST00000536871 APCSP02743 223 aa10.58□□□□□ -0.72
SMG6-203ENST00000536871 ATP5G2Q06055 141 aa10.58□□□□□ -0.72
SMG6-203ENST00000536871 FAM162BQ5T6X4 162 aa10.58□□□□□ -0.72
SMG6-203ENST00000536871 Q6AWC8 147 aa10.58□□□□□ -0.72
SMG6-203ENST00000536871 BAGE3Q86Y29 109 aa10.58□□□□□ -0.72
SMG6-203ENST00000536871 ZNF580Q9UK33 172 aa10.58□□□□□ -0.72
SMG6-203ENST00000536871 PSG8Q9UQ74 426 aa10.58□□□□□ -0.72
SMG6-203ENST00000536871 KALRNO60229 2985 aa10.58□□□□□ -0.72
SMG6-203ENST00000536871 ARHGAP32A7KAX9 2087 aa10.58□□□□□ -0.72
SMG6-203ENST00000536871 H3BTX0 84 aa10.57□□□□□ -0.72
SMG6-203ENST00000536871 CT45A10P0DMU9 189 aa10.57□□□□□ -0.72
SMG6-203ENST00000536871 GPR183P32249 361 aa10.57□□□□□ -0.72
SMG6-203ENST00000536871 RBPMS2Q6ZRY4 209 aaKnown RBP10.57□□□□□ -0.72
SMG6-203ENST00000536871 SMIM15Q7Z3B0 74 aa10.57□□□□□ -0.72
SMG6-203ENST00000536871 COX8CQ7Z4L0 72 aa10.57□□□□□ -0.72
SMG6-203ENST00000536871 PRNTQ86SH4 94 aa10.57□□□□□ -0.72
SMG6-203ENST00000536871 CIARTQ8N365 385 aaPredicted RBP10.57□□□□□ -0.72
SMG6-203ENST00000536871 CLEC5AQ9NY25 188 aa10.57□□□□□ -0.72
SMG6-203ENST00000536871 CHTOPQ9Y3Y2 248 aaKnown RBP10.57□□□□□ -0.72
SMG6-203ENST00000536871 S4R3C0 116 aa10.57□□□□□ -0.72
SMG6-203ENST00000536871 PKD1L2Q7Z442 2459 aa10.57□□□□□ -0.72
SMG6-203ENST00000536871 A0A1B0GW15 77 aa10.57□□□□□ -0.72
SMG6-203ENST00000536871 CLEC3BP05452 202 aa10.57□□□□□ -0.72
SMG6-203ENST00000536871 FOXA3P55318 350 aaPredicted RBP10.57□□□□□ -0.72
SMG6-203ENST00000536871 C19orf54Q5BKX5 351 aa10.57□□□□□ -0.72
SMG6-203ENST00000536871 MRPL54Q6P161 138 aaKnown RBP10.57□□□□□ -0.72
SMG6-203ENST00000536871 C16orf54Q6UWD8 224 aa10.57□□□□□ -0.72
SMG6-203ENST00000536871 PIFOQ8TCI5 191 aa10.57□□□□□ -0.72
SMG6-203ENST00000536871 USMG5Q96IX5 58 aa10.57□□□□□ -0.72
SMG6-203ENST00000536871 SLC50A1Q9BRV3 221 aa10.57□□□□□ -0.72
SMG6-203ENST00000536871 TCF21O43680 179 aa10.56□□□□□ -0.72
SMG6-203ENST00000536871 HBBP68871 147 aa10.56□□□□□ -0.72
SMG6-203ENST00000536871 TOMM20LQ6UXN7 152 aa10.56□□□□□ -0.72
SMG6-203ENST00000536871 METTL26Q96S19 204 aa10.56□□□□□ -0.72
SMG6-203ENST00000536871 ZFAND3Q9H8U3 227 aa10.56□□□□□ -0.72
SMG6-203ENST00000536871 A0A1B0GXF2 115 aa10.55□□□□□ -0.72
SMG6-203ENST00000536871 A6NDX4 124 aa10.55□□□□□ -0.72
SMG6-203ENST00000536871 ZNF705FA8MVS1 300 aaPredicted RBP10.55□□□□□ -0.72
SMG6-203ENST00000536871 CA1P00915 261 aaPredicted RBP10.55□□□□□ -0.72
SMG6-203ENST00000536871 IGHG2P01859 326 aa10.55□□□□□ -0.72
SMG6-203ENST00000536871 ZNF705DP0CH99 300 aaPredicted RBP10.55□□□□□ -0.72
SMG6-203ENST00000536871 ZNF705BP0CI00 300 aaPredicted RBP10.55□□□□□ -0.72
SMG6-203ENST00000536871 LINC01356Q8N9X3 169 aa10.55□□□□□ -0.72
SMG6-203ENST00000536871 SVIPQ8NHG7 77 aa10.55□□□□□ -0.72
SMG6-203ENST00000536871 VAMP8Q9BV40 100 aa10.55□□□□□ -0.72
SMG6-203ENST00000536871 IGHV3-23P01764 117 aa10.55□□□□□ -0.72
SMG6-203ENST00000536871 C17orf77Q96MU5 243 aa10.55□□□□□ -0.72
SMG6-203ENST00000536871 HIF1ANQ9NWT6 349 aa10.55□□□□□ -0.72
SMG6-203ENST00000536871 G3V318 75 aa10.54□□□□□ -0.72
SMG6-203ENST00000536871 BUB3O43684 328 aa10.54□□□□□ -0.72
SMG6-203ENST00000536871 SPINK4O60575 86 aa10.54□□□□□ -0.72
SMG6-203ENST00000536871 BRD3OSQ6XYD6 125 aa10.54□□□□□ -0.72
SMG6-203ENST00000536871 MRPL53Q96EL3 112 aaKnown RBP10.54□□□□□ -0.72
SMG6-203ENST00000536871 SGK494Q96LW2 274 aa10.54□□□□□ -0.72
SMG6-203ENST00000536871 CCDC140Q96MF4 163 aa10.54□□□□□ -0.72
SMG6-203ENST00000536871 GNB4Q9HAV0 340 aa10.54□□□□□ -0.72
SMG6-203ENST00000536871 TRAV8-1A0A0A6YYK1 113 aa10.53□□□□□ -0.72
SMG6-203ENST00000536871 GRIFINA4D1Z8 144 aa10.53□□□□□ -0.72
SMG6-203ENST00000536871 RBAKDNA6NC62 111 aa10.53□□□□□ -0.72
SMG6-203ENST00000536871 IGHV4-38-2P0DP08 117 aa10.53□□□□□ -0.72
SMG6-203ENST00000536871 SLC35B1P78383 322 aa10.53□□□□□ -0.72
SMG6-203ENST00000536871 UBE2V1Q13404 147 aa10.53□□□□□ -0.72
SMG6-203ENST00000536871 KLF5Q13887 457 aaPredicted RBP10.53□□□□□ -0.72
SMG6-203ENST00000536871 CLEC19AQ6UXS0 136 aa10.53□□□□□ -0.72
SMG6-203ENST00000536871 TMEM256Q8N2U0 113 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms