RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 MED28Q9H204 178 aa4.24□□□□□ -1.73
CCDC60-203ENST00000536742 STRAPQ9Y3F4 350 aaKnown RBP4.24□□□□□ -1.73
CCDC60-203ENST00000536742 IGKV1D-8A0A087WSZ0 117 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 IGHV3-43A0A0B4J1X8 118 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 A0A1W2PPE3 182 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 TMEM213A2RRL7 107 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 OR5H14A6NHG9 310 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 A8MWP6 167 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 GGCTO75223 188 aaKnown RBP4.23□□□□□ -1.73
CCDC60-203ENST00000536742 SNAPC5O75971 98 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 HLA-AP01891 365 aaKnown RBP4.23□□□□□ -1.73
CCDC60-203ENST00000536742 REG1AP05451 166 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 OR4E1P0C645 316 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 ZNF735P0CB33 412 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 DNAH10OSP0CZ25 163 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 IGHV3-43DP0DP04 118 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 GNRHRP30968 328 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 LGALS7P47929 136 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 RND3P61587 244 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 IFITM3Q01628 133 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 PLGLAQ15195 96 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 ZNF562Q6V9R5 426 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 Q6ZSA8 131 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 SLC25A48Q6ZT89 311 aaKnown RBP4.23□□□□□ -1.73
CCDC60-203ENST00000536742 LHFPL1Q86WI0 220 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 LGI3Q8N145 548 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 OR13C8Q8NGS7 320 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 TYMSOSQ8TAI1 123 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 C9orf85Q96MD7 179 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 SPXQ9BT56 116 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 OR2D2Q9H210 308 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 NRN1Q9NPD7 142 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 PRR34Q9NV39 138 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 OR1A1Q9P1Q5 309 aa4.23□□□□□ -1.73
CCDC60-203ENST00000536742 A0A0B4J2A0 478 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 IGKV1-6A0A0C4DH72 117 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 C3orf85A0A1B0GTC6 90 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 DUXBA0A1W2PPF3 345 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 H7C2Y5 167 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 M0R1X1 148 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 PFDN1O60925 122 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 SFT2D2O95562 160 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 HRASP01112 189 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 C8orf88P0DMB2 117 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 HTN3P15516 51 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 THOC7Q6I9Y2 204 aaKnown RBP4.22□□□□□ -1.73
CCDC60-203ENST00000536742 FAM159AQ6UWV7 190 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 CLEC19AQ6UXS0 136 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 SSX7Q7RTT5 188 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 C12orf45Q8N5I9 185 aaPredicted RBP4.22□□□□□ -1.73
CCDC60-203ENST00000536742 OR5T1Q8NG75 326 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 OR4S2Q8NH73 311 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 ZNF431Q8TF32 576 aaPredicted RBP4.22□□□□□ -1.73
CCDC60-203ENST00000536742 TCTEX1D2Q8WW35 142 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 ASB13Q8WXK3 278 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 ABHD14BQ96IU4 210 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 SPIN2AQ99865 258 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 SPIN2BQ9BPZ2 258 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 DPH3P1Q9H4G8 78 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 NAA60Q9H7X0 242 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 CCL28Q9NRJ3 127 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 SLC2A9Q9NRM0 540 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 TMEM14BQ9NUH8 114 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 ZNF586Q9NXT0 402 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 MRPL27Q9P0M9 148 aaKnown RBP4.22□□□□□ -1.73
CCDC60-203ENST00000536742 SHPKQ9UHJ6 478 aa4.22□□□□□ -1.73
CCDC60-203ENST00000536742 TRAV9-2A0A087WT02 112 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.21□□□□□ -1.74
CCDC60-203ENST00000536742 C9orf170A2RU37 121 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 TMEM189A5PLL7 270 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 CRYM-AS1A6NIL9 109 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 RBFOX2O43251 390 aaKnown RBP eCLIP4.21□□□□□ -1.74
CCDC60-203ENST00000536742 ZNF253O75346 499 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 PGLYRP1O75594 196 aaPredicted RBP4.21□□□□□ -1.74
CCDC60-203ENST00000536742 HPRT1P00492 218 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 RLN2P04090 185 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 F2RP25116 425 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 BTCP35070 178 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 ZNF137PP52743 207 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 DHRS2Q13268 280 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 GAMTQ14353 236 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 CLINT1Q14677 625 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 SMCO1Q147U7 214 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 CT45A1Q5HYN5 189 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 ZNF818PQ6ZRF7 136 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 OR51H1Q8NH63 302 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 CT45A3Q8NHU0 189 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 VSTM2AQ8TAG5 236 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 VN1R17PQ8TDU5 208 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 IL22RA2Q969J5 263 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 CLCC1Q96S66 551 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 RNF5Q99942 180 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 NIPSNAP3BQ9BS92 247 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 AGMATQ9BSE5 352 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 RTBDNQ9BSG5 229 aaPredicted RBP4.21□□□□□ -1.74
CCDC60-203ENST00000536742 PDCD10Q9BUL8 212 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 SDHAF2Q9NX18 166 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 FKBP11Q9NYL4 201 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 COMMD9Q9P000 198 aa4.21□□□□□ -1.74
CCDC60-203ENST00000536742 DHRS4-AS1Q9P1J3 65 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms