RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 PDCD10Q9BUL8 212 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 C20orf24Q9BUV8 137 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 TM2D1Q9BX74 207 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 MIXL1Q9H2W2 232 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 CLEC2DQ9UHP7 191 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 TBC1D24Q9ULP9 559 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 POMPQ9Y244 141 aa3.46□□□□□ -1.86
CLIP1-207ENST00000536634 IGHV3OR16-13A0A075B7E8 117 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 IGHV3-74A0A0B4J1X5 117 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 IGHV7-4-1A0A0J9YVY3 117 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 PANO1I0J062 215 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 NDUFA4O00483 81 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 SOCS1O15524 211 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 CREBL2O60519 120 aaPredicted RBP3.45□□□□□ -1.86
CLIP1-207ENST00000536634 SMR3BP02814 79 aaPredicted RBP3.45□□□□□ -1.86
CLIP1-207ENST00000536634 STAG3L3P0CL85 134 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 DEFA4P12838 97 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 HLA-DMAP28067 261 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 RBX1P62877 108 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 RPL30P62888 115 aaKnown RBP3.45□□□□□ -1.86
CLIP1-207ENST00000536634 GAMTQ14353 236 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 ATP6AP1Q15904 470 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 Q499Y3 187 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 CDNFQ49AH0 187 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 RPL22L1Q6P5R6 122 aaKnown RBP3.45□□□□□ -1.86
CLIP1-207ENST00000536634 MORN3Q6PF18 240 aaPredicted RBP3.45□□□□□ -1.86
CLIP1-207ENST00000536634 TEX261Q6UWH6 196 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 ARRDC1Q8N5I2 433 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 ZFP41Q8N8Y5 198 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 ZNRF2Q8NHG8 242 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 C16orf74Q96GX8 76 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 PGLYRP3Q96LB9 341 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 OR2A7Q96R45 310 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 RHPN1-AS1Q9BWJ2 59 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 TMEM59Q9BXS4 323 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 NAA50Q9GZZ1 169 aaKnown RBP3.45□□□□□ -1.86
CLIP1-207ENST00000536634 OR51E2Q9H255 320 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 PLEKHJ1Q9NW61 149 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 CKLFQ9UBR5 152 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 SMPXQ9UHP9 88 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 ALG5Q9Y673 324 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 U3KQ87 197 aa3.45□□□□□ -1.86
CLIP1-207ENST00000536634 IGLC7A0M8Q6 106 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 KNCNA6PVL3 124 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 TRDCB7Z8K6 153 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 K7EMT4 169 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 SERF1AO75920 110 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 GABARAPO95166 117 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 IFNA7P01567 189 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 RLN2P04090 185 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 HTN3P15516 51 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 HIST1H1BP16401 226 aaKnown RBP3.44□□□□□ -1.86
CLIP1-207ENST00000536634 SRMP19623 302 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 CELP19835 753 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 ETV6P41212 452 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 HAMPP81172 84 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 QRFPP83859 136 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 ARFRP1Q13795 201 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 HACD4Q5VWC8 232 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 MEDAGQ5VYS4 303 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 ZNF773Q6PK81 442 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 SMIM15Q7Z3B0 74 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 HSD17B13Q7Z5P4 300 aaPredicted RBP3.44□□□□□ -1.86
CLIP1-207ENST00000536634 PUSL1Q8N0Z8 303 aaKnown RBP3.44□□□□□ -1.86
CLIP1-207ENST00000536634 C12orf45Q8N5I9 185 aaPredicted RBP3.44□□□□□ -1.86
CLIP1-207ENST00000536634 C14orf178Q8N769 122 aaPredicted RBP3.44□□□□□ -1.86
CLIP1-207ENST00000536634 TMEM167AQ8TBQ9 72 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 DYNC2LI1Q8TCX1 351 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 FRZBQ92765 325 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 SLC25A38Q96DW6 304 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 ARHGAP5-AS1Q96IT6 56 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 HYLS1Q96M11 299 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 LINC00052Q96N35 136 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 DERL3Q96Q80 235 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 CCDC90BQ9GZT6 254 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 LPAR5Q9H1C0 372 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 MS4A6AQ9H2W1 248 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 TMEM14BQ9NUH8 114 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 GOLT1BQ9Y3E0 138 aa3.44□□□□□ -1.86
CLIP1-207ENST00000536634 STRAPQ9Y3F4 350 aaKnown RBP3.44□□□□□ -1.86
CLIP1-207ENST00000536634 TRBV6-7A0A0A0MS04 114 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 TRAV3A0A0B4J244 114 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 IGHV3-66A0A0C4DH42 116 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 PNMA8CA0A1B0GUJ8 204 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 TMEM14DPA8MWL7 114 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 TMEM238C9JI98 176 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 FABP7O15540 132 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 DLEU1O43261 78 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 CTXN2P0C2S0 81 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 HLA-GP17693 338 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 CRHBPP24387 322 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 NPY1RP25929 384 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 MAS1LP35410 378 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 EMP1P54849 157 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 CMC4P56277 68 aaPredicted RBP3.43□□□□□ -1.86
CLIP1-207ENST00000536634 OR2B8PP59922 312 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 TPBGQ13641 420 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 INSL4Q14641 139 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 LIPKQ5VXJ0 399 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms