RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 LINC00305Q7Z4B0 112 aa13.19□□□□□ -0.3
CCDC61-201ENST00000536603 TMEM37Q8WXS4 190 aa13.19□□□□□ -0.3
CCDC61-201ENST00000536603 C17orf77Q96MU5 243 aa13.19□□□□□ -0.3
CCDC61-201ENST00000536603 LINC00052Q96N35 136 aa13.19□□□□□ -0.3
CCDC61-201ENST00000536603 SLC39A9Q9NUM3 307 aa13.19□□□□□ -0.3
CCDC61-201ENST00000536603 PLA2G2EQ9NZK7 142 aa13.19□□□□□ -0.3
CCDC61-201ENST00000536603 SOCS3O14543 225 aa13.18□□□□□ -0.3
CCDC61-201ENST00000536603 SPRY2O43597 315 aa13.18□□□□□ -0.3
CCDC61-201ENST00000536603 RPL7P18124 248 aaKnown RBP13.18□□□□□ -0.3
CCDC61-201ENST00000536603 PSMB3P49720 205 aa13.18□□□□□ -0.3
CCDC61-201ENST00000536603 B2MP61769 119 aa13.18□□□□□ -0.3
CCDC61-201ENST00000536603 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.18□□□□□ -0.3
CCDC61-201ENST00000536603 TRPT1Q86TN4 253 aaKnown RBP13.18□□□□□ -0.3
CCDC61-201ENST00000536603 C16orf92Q96LL3 132 aa13.18□□□□□ -0.3
CCDC61-201ENST00000536603 DNAJC4Q9NNZ3 241 aa13.18□□□□□ -0.3
CCDC61-201ENST00000536603 ELOA3CA0A087WX78 387 aaPredicted RBP13.17□□□□□ -0.3
CCDC61-201ENST00000536603 ATF4P18848 351 aaPredicted RBP13.17□□□□□ -0.3
CCDC61-201ENST00000536603 MEOX2P50222 304 aa13.17□□□□□ -0.3
CCDC61-201ENST00000536603 C10orf113Q5VZT2 155 aa13.17□□□□□ -0.3
CCDC61-201ENST00000536603 ZNF709Q8N972 641 aa13.17□□□□□ -0.3
CCDC61-201ENST00000536603 RNF183Q96D59 192 aa13.17□□□□□ -0.3
CCDC61-201ENST00000536603 TIMM9Q9Y5J7 89 aa13.17□□□□□ -0.3
CCDC61-201ENST00000536603 ISLRO14498 428 aa13.16□□□□□ -0.3
CCDC61-201ENST00000536603 CA1P00915 261 aaPredicted RBP13.16□□□□□ -0.3
CCDC61-201ENST00000536603 DEFB1P60022 68 aa13.16□□□□□ -0.3
CCDC61-201ENST00000536603 FFAR4Q5NUL3 377 aa13.16□□□□□ -0.3
CCDC61-201ENST00000536603 SAMD13Q5VXD3 122 aa13.16□□□□□ -0.3
CCDC61-201ENST00000536603 MORN5Q5VZ52 161 aa13.16□□□□□ -0.3
CCDC61-201ENST00000536603 OR1L4Q8NGR5 311 aa13.16□□□□□ -0.3
CCDC61-201ENST00000536603 STOML3Q8TAV4 291 aa13.16□□□□□ -0.3
CCDC61-201ENST00000536603 PSMG3Q9BT73 122 aaPredicted RBP13.16□□□□□ -0.3
CCDC61-201ENST00000536603 RNF24Q9Y225 148 aa13.16□□□□□ -0.3
CCDC61-201ENST00000536603 TP53TG1Q9Y2A0 90 aa13.16□□□□□ -0.3
CCDC61-201ENST00000536603 C17orf112F2Z3M2 114 aa13.15□□□□□ -0.3
CCDC61-201ENST00000536603 SPP1P10451 314 aa13.15□□□□□ -0.3
CCDC61-201ENST00000536603 SLC51BQ86UW2 128 aa13.15□□□□□ -0.3
CCDC61-201ENST00000536603 OR2G3Q8NGZ4 309 aa13.15□□□□□ -0.3
CCDC61-201ENST00000536603 EIF3GO75821 320 aaKnown RBP eCLIP13.14□□□□□ -0.31
CCDC61-201ENST00000536603 RAB2AP61019 212 aa13.14□□□□□ -0.31
CCDC61-201ENST00000536603 GDF5OSQ5U4N7 250 aa13.14□□□□□ -0.31
CCDC61-201ENST00000536603 SPATA31B1PQ5VZV4 182 aa13.14□□□□□ -0.31
CCDC61-201ENST00000536603 IGFL4Q6B9Z1 124 aa13.14□□□□□ -0.31
CCDC61-201ENST00000536603 BAP18Q8IXM2 172 aa13.14□□□□□ -0.31
CCDC61-201ENST00000536603 GNPNAT1Q96EK6 184 aaPredicted RBP13.14□□□□□ -0.31
CCDC61-201ENST00000536603 C20orf173Q96LM9 149 aa13.14□□□□□ -0.31
CCDC61-201ENST00000536603 PFDN5Q99471 154 aa13.14□□□□□ -0.31
CCDC61-201ENST00000536603 TRAV5A0A0B4J249 113 aa13.13□□□□□ -0.31
CCDC61-201ENST00000536603 H3BMM0 161 aa13.13□□□□□ -0.31
CCDC61-201ENST00000536603 MRPS12O15235 138 aaKnown RBP13.13□□□□□ -0.31
CCDC61-201ENST00000536603 LY6G6CO95867 125 aa13.13□□□□□ -0.31
CCDC61-201ENST00000536603 SNRPCP09234 159 aaKnown RBP13.13□□□□□ -0.31
CCDC61-201ENST00000536603 HLA-DRB4P13762 266 aa13.13□□□□□ -0.31
CCDC61-201ENST00000536603 MORN3Q6PF18 240 aaPredicted RBP13.13□□□□□ -0.31
CCDC61-201ENST00000536603 BPIFA4PQ86YQ2 179 aa13.13□□□□□ -0.31
CCDC61-201ENST00000536603 SAV1Q9H4B6 383 aaPredicted RBP13.13□□□□□ -0.31
CCDC61-201ENST00000536603 KCNIP2Q9NS61 270 aa13.13□□□□□ -0.31
CCDC61-201ENST00000536603 HLA-DRB4X5D2U9 266 aa13.13□□□□□ -0.31
CCDC61-201ENST00000536603 A0A087X0K7 114 aa13.12□□□□□ -0.31
CCDC61-201ENST00000536603 TRAV8-2A0A0B4J237 113 aa13.12□□□□□ -0.31
CCDC61-201ENST00000536603 GIG44P09565 113 aaPredicted RBP13.12□□□□□ -0.31
CCDC61-201ENST00000536603 TPT1P13693 172 aaKnown RBP13.12□□□□□ -0.31
CCDC61-201ENST00000536603 FOXI2Q6ZQN5 318 aa13.12□□□□□ -0.31
CCDC61-201ENST00000536603 LRRC20Q8TCA0 184 aa13.12□□□□□ -0.31
CCDC61-201ENST00000536603 TMED6Q8WW62 240 aa13.12□□□□□ -0.31
CCDC61-201ENST00000536603 RPRMQ9NS64 109 aa13.12□□□□□ -0.31
CCDC61-201ENST00000536603 F6UB75 175 aa13.11□□□□□ -0.31
CCDC61-201ENST00000536603 IGKV3-20P01619 116 aa13.11□□□□□ -0.31
CCDC61-201ENST00000536603 C4BPBP20851 252 aa13.11□□□□□ -0.31
CCDC61-201ENST00000536603 EBLN2Q6P2I7 272 aa13.11□□□□□ -0.31
CCDC61-201ENST00000536603 RPP25LQ8N5L8 163 aaKnown RBP13.11□□□□□ -0.31
CCDC61-201ENST00000536603 RNF182Q8N6D2 247 aa13.11□□□□□ -0.31
CCDC61-201ENST00000536603 GATAD1Q8WUU5 269 aa13.11□□□□□ -0.31
CCDC61-201ENST00000536603 RARRES2Q99969 163 aa13.11□□□□□ -0.31
CCDC61-201ENST00000536603 SEC11BP0C7V7 166 aa13.1□□□□□ -0.31
CCDC61-201ENST00000536603 M6PRP20645 277 aa13.1□□□□□ -0.31
CCDC61-201ENST00000536603 NUTF2P61970 127 aaKnown RBP13.1□□□□□ -0.31
CCDC61-201ENST00000536603 EIF5AP63241 154 aaKnown RBP13.1□□□□□ -0.31
CCDC61-201ENST00000536603 SERF2P84101 59 aa13.1□□□□□ -0.31
CCDC61-201ENST00000536603 MIR17HGQ75NE6 70 aa13.1□□□□□ -0.31
CCDC61-201ENST00000536603 OR4B1Q8NGF8 309 aa13.1□□□□□ -0.31
CCDC61-201ENST00000536603 LINC00476Q8WZB0 136 aa13.1□□□□□ -0.31
CCDC61-201ENST00000536603 A0A0J9YWU9 116 aa13.09□□□□□ -0.31
CCDC61-201ENST00000536603 CXorf65A6NEN9 183 aa13.09□□□□□ -0.31
CCDC61-201ENST00000536603 H3BTX0 84 aa13.09□□□□□ -0.31
CCDC61-201ENST00000536603 HLA-DMBP28068 263 aa13.09□□□□□ -0.31
CCDC61-201ENST00000536603 FHITP49789 147 aa13.09□□□□□ -0.31
CCDC61-201ENST00000536603 PMS2P11Q13670 270 aa13.09□□□□□ -0.31
CCDC61-201ENST00000536603 ACOT6Q3I5F7 207 aaPredicted RBP13.09□□□□□ -0.31
CCDC61-201ENST00000536603 TMEM41BQ5BJD5 291 aa13.09□□□□□ -0.31
CCDC61-201ENST00000536603 FAM78BQ5VT40 261 aa13.09□□□□□ -0.31
CCDC61-201ENST00000536603 SSX7Q7RTT5 188 aa13.09□□□□□ -0.31
CCDC61-201ENST00000536603 OR10G4Q8NGN3 311 aa13.09□□□□□ -0.31
CCDC61-201ENST00000536603 OR10G9Q8NGN4 311 aa13.09□□□□□ -0.31
CCDC61-201ENST00000536603 OR10G7Q8NGN6 311 aa13.09□□□□□ -0.31
CCDC61-201ENST00000536603 OR11H2Q8NH07 326 aa13.09□□□□□ -0.31
CCDC61-201ENST00000536603 CLEC5AQ9NY25 188 aa13.09□□□□□ -0.31
CCDC61-201ENST00000536603 A0A0J9YX75 114 aa13.08□□□□□ -0.32
CCDC61-201ENST00000536603 H3BQ15 152 aa13.08□□□□□ -0.32
CCDC61-201ENST00000536603 IGLC2P0DOY2 106 aa13.08□□□□□ -0.32
CCDC61-201ENST00000536603 ZNF726P1Q15940 193 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms