RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 F11RQ9Y624 299 aaKnown RBP10.62□□□□□ -0.71
HDAC4-214ENST00000535493 AKAP6Q13023 2319 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 ZNF292O60281 2723 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 IGHV3OR16-8A0A075B7F1 116 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 TMEM265A0A087WTH1 108 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 NPIPB6E9PJ23 425 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 H3BUT2 72 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 CD5LO43866 347 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 IGLC1P0CG04 106 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 COX8AP10176 69 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 LOXP28300 417 aaPredicted RBP10.61□□□□□ -0.71
HDAC4-214ENST00000535493 BSPH1Q075Z2 132 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 IGFL4Q6B9Z1 124 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 ARL6IP6Q8N6S5 226 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 JMJD8Q96S16 334 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 MEGF9Q9H1U4 602 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 VPS13CQ709C8 3753 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 GAGE10A6NGK3 116 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 INS-IGF2F8WCM5 200 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 CACNG7P62955 275 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 TMEM97Q5BJF2 176 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 RASL11BQ9BPW5 248 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 TTTY13Q9BZ97 58 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 GFRA4Q9GZZ7 299 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 C1RLQ9NZP8 487 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 THYN1Q9P016 225 aa10.61□□□□□ -0.71
HDAC4-214ENST00000535493 TMEM178BH3BS89 294 aa10.6□□□□□ -0.71
HDAC4-214ENST00000535493 K7EMI3 77 aa10.6□□□□□ -0.71
HDAC4-214ENST00000535493 MEF2CQ06413 473 aaPredicted RBP10.6□□□□□ -0.71
HDAC4-214ENST00000535493 PLGLAQ15195 96 aa10.6□□□□□ -0.71
HDAC4-214ENST00000535493 IGFL2Q6UWQ7 119 aa10.6□□□□□ -0.71
HDAC4-214ENST00000535493 DEFB123Q8N688 67 aa10.6□□□□□ -0.71
HDAC4-214ENST00000535493 OTORQ9NRC9 128 aa10.6□□□□□ -0.71
HDAC4-214ENST00000535493 SIGLEC9Q9Y336 463 aa10.6□□□□□ -0.71
HDAC4-214ENST00000535493 IGKV1-17P01599 117 aa10.6□□□□□ -0.71
HDAC4-214ENST00000535493 IGHV1-8P0DP01 117 aa10.6□□□□□ -0.71
HDAC4-214ENST00000535493 PCP2Q8IVA1 136 aa10.6□□□□□ -0.71
HDAC4-214ENST00000535493 OR4A5Q8NH83 315 aa10.6□□□□□ -0.71
HDAC4-214ENST00000535493 C18orf15Q96N68 181 aa10.6□□□□□ -0.71
HDAC4-214ENST00000535493 SIGLEC8Q9NYZ4 499 aa10.6□□□□□ -0.71
HDAC4-214ENST00000535493 SOX21Q9Y651 276 aaPredicted RBP10.6□□□□□ -0.71
HDAC4-214ENST00000535493 FCGR2BP31994 310 aaPredicted RBP10.59□□□□□ -0.71
HDAC4-214ENST00000535493 NMUP48645 174 aa10.59□□□□□ -0.71
HDAC4-214ENST00000535493 LYZL1Q6UWQ5 148 aa10.59□□□□□ -0.71
HDAC4-214ENST00000535493 OR10AG1Q8NH19 301 aa10.59□□□□□ -0.71
HDAC4-214ENST00000535493 PSG8Q9UQ74 426 aa10.59□□□□□ -0.71
HDAC4-214ENST00000535493 INSIG2Q9Y5U4 225 aa10.59□□□□□ -0.71
HDAC4-214ENST00000535493 TEX22C9J3V5 150 aa10.59□□□□□ -0.71
HDAC4-214ENST00000535493 PPBPP02775 128 aa10.59□□□□□ -0.71
HDAC4-214ENST00000535493 PPP1R27Q86WC6 154 aa10.59□□□□□ -0.71
HDAC4-214ENST00000535493 SMIM12Q96EX1 92 aa10.59□□□□□ -0.71
HDAC4-214ENST00000535493 PEF1Q9UBV8 284 aaKnown RBP10.59□□□□□ -0.71
HDAC4-214ENST00000535493 GAS8-AS1O95177 125 aa10.58□□□□□ -0.72
HDAC4-214ENST00000535493 IL4P05112 153 aa10.58□□□□□ -0.72
HDAC4-214ENST00000535493 CSN1S1P47710 185 aa10.58□□□□□ -0.72
HDAC4-214ENST00000535493 IGHV3-35A0A0C4DH35 117 aa10.58□□□□□ -0.72
HDAC4-214ENST00000535493 CNIH1O95406 144 aa10.58□□□□□ -0.72
HDAC4-214ENST00000535493 IGHV3-23P01764 117 aa10.58□□□□□ -0.72
HDAC4-214ENST00000535493 FGF6P10767 208 aa10.58□□□□□ -0.72
HDAC4-214ENST00000535493 TMEM108Q6UXF1 575 aa10.58□□□□□ -0.72
HDAC4-214ENST00000535493 MS4A6AQ9H2W1 248 aa10.58□□□□□ -0.72
HDAC4-214ENST00000535493 NGBQ9NPG2 151 aa10.58□□□□□ -0.72
HDAC4-214ENST00000535493 TRBV19A0A075B6N1 114 aa10.57□□□□□ -0.72
HDAC4-214ENST00000535493 RIGQ13278 110 aa10.57□□□□□ -0.72
HDAC4-214ENST00000535493 C1orf185Q5T7R7 199 aa10.57□□□□□ -0.72
HDAC4-214ENST00000535493 MC5RP33032 325 aa10.57□□□□□ -0.72
HDAC4-214ENST00000535493 LGALS7P47929 136 aa10.57□□□□□ -0.72
HDAC4-214ENST00000535493 TMEM75Q8N9X5 138 aa10.57□□□□□ -0.72
HDAC4-214ENST00000535493 Q8TAT8 98 aa10.57□□□□□ -0.72
HDAC4-214ENST00000535493 DKK2Q9UBU2 259 aa10.57□□□□□ -0.72
HDAC4-214ENST00000535493 IGKV2-40A0A087WW87 121 aaPredicted RBP10.57□□□□□ -0.72
HDAC4-214ENST00000535493 IGKV2D-40P01614 121 aaPredicted RBP10.57□□□□□ -0.72
HDAC4-214ENST00000535493 DLX6P56179 175 aa10.57□□□□□ -0.72
HDAC4-214ENST00000535493 FAM71F2Q6NXP2 309 aa10.57□□□□□ -0.72
HDAC4-214ENST00000535493 SIGLEC15Q6ZMC9 328 aa10.57□□□□□ -0.72
HDAC4-214ENST00000535493 PRELID3AQ96N28 172 aa10.57□□□□□ -0.72
HDAC4-214ENST00000535493 MSRB1Q9NZV6 116 aa10.57□□□□□ -0.72
HDAC4-214ENST00000535493 IGHV1-3A0A0C4DH29 117 aa10.56□□□□□ -0.72
HDAC4-214ENST00000535493 I3L2K1 104 aa10.56□□□□□ -0.72
HDAC4-214ENST00000535493 FTH1P19P0C7X4 201 aa10.56□□□□□ -0.72
HDAC4-214ENST00000535493 KIR3DS1Q14943 382 aa10.56□□□□□ -0.72
HDAC4-214ENST00000535493 AP1S3Q96PC3 154 aa10.56□□□□□ -0.72
HDAC4-214ENST00000535493 TMEM30BQ3MIR4 351 aa10.56□□□□□ -0.72
HDAC4-214ENST00000535493 TMEM155Q4W5P6 130 aa10.56□□□□□ -0.72
HDAC4-214ENST00000535493 CSTL1Q9H114 145 aa10.56□□□□□ -0.72
HDAC4-214ENST00000535493 ANKHD1Q8IWZ3 2542 aaKnown RBP10.55□□□□□ -0.72
HDAC4-214ENST00000535493 PSG3Q16557 428 aa10.55□□□□□ -0.72
HDAC4-214ENST00000535493 NPIPB5A8MRT5 1133 aa10.55□□□□□ -0.72
HDAC4-214ENST00000535493 K7ERU9 68 aa10.55□□□□□ -0.72
HDAC4-214ENST00000535493 M0R296 226 aa10.55□□□□□ -0.72
HDAC4-214ENST00000535493 THBDP07204 575 aa10.55□□□□□ -0.72
HDAC4-214ENST00000535493 HLA-DMBP28068 263 aa10.55□□□□□ -0.72
HDAC4-214ENST00000535493 PPIFP30405 207 aaKnown RBP10.55□□□□□ -0.72
HDAC4-214ENST00000535493 FER1L6-AS1Q8NA97 138 aa10.55□□□□□ -0.72
HDAC4-214ENST00000535493 A0A0G2JNJ9 132 aa10.54□□□□□ -0.72
HDAC4-214ENST00000535493 NPYP01303 97 aa10.54□□□□□ -0.72
HDAC4-214ENST00000535493 PLP1P60201 277 aa10.54□□□□□ -0.72
HDAC4-214ENST00000535493 MRPL51Q4U2R6 128 aaKnown RBP10.54□□□□□ -0.72
HDAC4-214ENST00000535493 C16orf54Q6UWD8 224 aa10.54□□□□□ -0.72
HDAC4-214ENST00000535493 SMIM15Q7Z3B0 74 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms