RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 UFC1Q9Y3C8 167 aa12.71□□□□□ -0.38
MCF2L-232ENST00000535094 IGKV2-40A0A087WW87 121 aaPredicted RBP12.7□□□□□ -0.38
MCF2L-232ENST00000535094 IGHV3-49A0A0A0MS15 119 aa12.7□□□□□ -0.38
MCF2L-232ENST00000535094 IGHV3-66A0A0C4DH42 116 aa12.7□□□□□ -0.38
MCF2L-232ENST00000535094 IGKV2D-40P01614 121 aaPredicted RBP12.7□□□□□ -0.38
MCF2L-232ENST00000535094 SCGB2A2Q13296 93 aa12.7□□□□□ -0.38
MCF2L-232ENST00000535094 C8orf49Q96NF6 230 aa12.7□□□□□ -0.38
MCF2L-232ENST00000535094 NGBQ9NPG2 151 aa12.7□□□□□ -0.38
MCF2L-232ENST00000535094 CDKN1BP46527 198 aa12.7□□□□□ -0.38
MCF2L-232ENST00000535094 PLP1P60201 277 aa12.7□□□□□ -0.38
MCF2L-232ENST00000535094 ZNF785A8K8V0 405 aa12.69□□□□□ -0.38
MCF2L-232ENST00000535094 SOX21Q9Y651 276 aaPredicted RBP12.69□□□□□ -0.38
MCF2L-232ENST00000535094 TNRC6BQ9UPQ9 1833 aaKnown RBP12.69□□□□□ -0.38
MCF2L-232ENST00000535094 MEF2CQ06413 473 aaPredicted RBP12.69□□□□□ -0.38
MCF2L-232ENST00000535094 CR1LQ2VPA4 569 aa12.69□□□□□ -0.38
MCF2L-232ENST00000535094 K7EMI3 77 aa12.69□□□□□ -0.38
MCF2L-232ENST00000535094 LOXL1Q08397 574 aaPredicted RBP12.69□□□□□ -0.38
MCF2L-232ENST00000535094 ANKRD39Q53RE8 183 aa12.69□□□□□ -0.38
MCF2L-232ENST00000535094 DEFB125Q8N687 156 aa12.69□□□□□ -0.38
MCF2L-232ENST00000535094 SPCS1Q9Y6A9 102 aa12.69□□□□□ -0.38
MCF2L-232ENST00000535094 CD5LO43866 347 aa12.68□□□□□ -0.38
MCF2L-232ENST00000535094 ADIPOQQ15848 244 aa12.68□□□□□ -0.38
MCF2L-232ENST00000535094 FAM120AOSQ5T036 256 aa12.68□□□□□ -0.38
MCF2L-232ENST00000535094 RABAC1Q9UI14 185 aa12.68□□□□□ -0.38
MCF2L-232ENST00000535094 TRGV9Q99603 122 aa12.68□□□□□ -0.38
MCF2L-232ENST00000535094 KLK15Q9H2R5 256 aa12.68□□□□□ -0.38
MCF2L-232ENST00000535094 MUC6Q6W4X9 2439 aa12.68□□□□□ -0.38
MCF2L-232ENST00000535094 FAM90A27PA6NNH2 459 aa12.68□□□□□ -0.38
MCF2L-232ENST00000535094 LY6HO94772 140 aa12.68□□□□□ -0.38
MCF2L-232ENST00000535094 ORMDL3Q8N138 153 aa12.68□□□□□ -0.38
MCF2L-232ENST00000535094 TTTY13Q9BZ97 58 aa12.68□□□□□ -0.38
MCF2L-232ENST00000535094 SIGLEC9Q9Y336 463 aa12.68□□□□□ -0.38
MCF2L-232ENST00000535094 A0A1B0GXF2 115 aa12.67□□□□□ -0.38
MCF2L-232ENST00000535094 IGHV1-8P0DP01 117 aa12.67□□□□□ -0.38
MCF2L-232ENST00000535094 KIR3DS1Q14943 382 aa12.67□□□□□ -0.38
MCF2L-232ENST00000535094 OR2K2Q8NGT1 345 aa12.67□□□□□ -0.38
MCF2L-232ENST00000535094 FAM215AQ9Y5M1 114 aa12.67□□□□□ -0.38
MCF2L-232ENST00000535094 DOPEY2Q9Y3R5 2298 aa12.67□□□□□ -0.38
MCF2L-232ENST00000535094 IGLV3-9A0A075B6K5 115 aa12.67□□□□□ -0.38
MCF2L-232ENST00000535094 LTAP01374 205 aa12.67□□□□□ -0.38
MCF2L-232ENST00000535094 PSMB11A5LHX3 300 aa12.67□□□□□ -0.38
MCF2L-232ENST00000535094 TMEM178BH3BS89 294 aa12.67□□□□□ -0.38
MCF2L-232ENST00000535094 RNF125Q96EQ8 232 aa12.66□□□□□ -0.38
MCF2L-232ENST00000535094 NEU4Q8WWR8 484 aaPredicted RBP12.66□□□□□ -0.38
MCF2L-232ENST00000535094 IFI27L1Q96BM0 104 aa12.66□□□□□ -0.38
MCF2L-232ENST00000535094 ZNF747Q9BV97 191 aa12.66□□□□□ -0.38
MCF2L-232ENST00000535094 MS4A6AQ9H2W1 248 aa12.66□□□□□ -0.38
MCF2L-232ENST00000535094 TMEM160Q9NX00 188 aa12.66□□□□□ -0.38
MCF2L-232ENST00000535094 PPIAL4CA0A0B4J2A2 164 aa12.66□□□□□ -0.38
MCF2L-232ENST00000535094 A0A0G2JLM5 398 aa12.66□□□□□ -0.38
MCF2L-232ENST00000535094 MBD3L4A6NDZ8 208 aaPredicted RBP12.66□□□□□ -0.38
MCF2L-232ENST00000535094 MBD3L3A6NE82 208 aaPredicted RBP12.66□□□□□ -0.38
MCF2L-232ENST00000535094 MBD3L5A6NJ08 208 aaPredicted RBP12.66□□□□□ -0.38
MCF2L-232ENST00000535094 PPIAL4GP0DN37 164 aa12.66□□□□□ -0.38
MCF2L-232ENST00000535094 FABP2P12104 132 aa12.66□□□□□ -0.38
MCF2L-232ENST00000535094 GP9P14770 177 aa12.66□□□□□ -0.38
MCF2L-232ENST00000535094 ARL6IP6Q8N6S5 226 aa12.66□□□□□ -0.38
MCF2L-232ENST00000535094 TMEM75Q8N9X5 138 aa12.66□□□□□ -0.38
MCF2L-232ENST00000535094 MBD3L2Q8NHZ7 208 aaPredicted RBP12.66□□□□□ -0.38
MCF2L-232ENST00000535094 CUL9Q8IWT3 2517 aa12.65□□□□□ -0.38
MCF2L-232ENST00000535094 GATA4P43694 442 aa12.65□□□□□ -0.38
MCF2L-232ENST00000535094 RHOGP84095 191 aa12.65□□□□□ -0.38
MCF2L-232ENST00000535094 PCP2Q8IVA1 136 aa12.65□□□□□ -0.38
MCF2L-232ENST00000535094 NDFIP1Q9BT67 221 aa12.65□□□□□ -0.38
MCF2L-232ENST00000535094 SCRT2Q9NQ03 307 aa12.65□□□□□ -0.38
MCF2L-232ENST00000535094 CTSZQ9UBR2 303 aa12.65□□□□□ -0.38
MCF2L-232ENST00000535094 ARL3P36405 182 aa12.65□□□□□ -0.38
MCF2L-232ENST00000535094 OR4A5Q8NH83 315 aa12.65□□□□□ -0.38
MCF2L-232ENST00000535094 COX8AP10176 69 aa12.65□□□□□ -0.39
MCF2L-232ENST00000535094 MTURNQ8N3F0 131 aa12.65□□□□□ -0.39
MCF2L-232ENST00000535094 THAP8Q8NA92 274 aa12.65□□□□□ -0.39
MCF2L-232ENST00000535094 PTPRBP23467 1997 aa12.64□□□□□ -0.39
MCF2L-232ENST00000535094 K7EM74 188 aa12.64□□□□□ -0.39
MCF2L-232ENST00000535094 SFTA2Q6UW10 78 aa12.64□□□□□ -0.39
MCF2L-232ENST00000535094 DEFB104AQ8WTQ1 72 aa12.64□□□□□ -0.39
MCF2L-232ENST00000535094 SIGLEC8Q9NYZ4 499 aa12.64□□□□□ -0.39
MCF2L-232ENST00000535094 TIMM23O14925 209 aa12.64□□□□□ -0.39
MCF2L-232ENST00000535094 FOXE3Q13461 319 aa12.64□□□□□ -0.39
MCF2L-232ENST00000535094 NHP2Q9NX24 153 aaKnown RBP12.64□□□□□ -0.39
MCF2L-232ENST00000535094 IGHV1-3A0A0C4DH29 117 aa12.64□□□□□ -0.39
MCF2L-232ENST00000535094 ZNF207O43670 478 aaKnown RBP12.64□□□□□ -0.39
MCF2L-232ENST00000535094 LOXP28300 417 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-232ENST00000535094 TMEM30BQ3MIR4 351 aa12.64□□□□□ -0.39
MCF2L-232ENST00000535094 IGKV3-7A0A075B6H7 116 aa12.63□□□□□ -0.39
MCF2L-232ENST00000535094 PRSS33Q8NF86 280 aa12.63□□□□□ -0.39
MCF2L-232ENST00000535094 CSPG4Q6UVK1 2322 aa12.63□□□□□ -0.39
MCF2L-232ENST00000535094 K7EP13 123 aa12.63□□□□□ -0.39
MCF2L-232ENST00000535094 HBDP02042 147 aa12.63□□□□□ -0.39
MCF2L-232ENST00000535094 IGLC1P0CG04 106 aa12.63□□□□□ -0.39
MCF2L-232ENST00000535094 FOXC2Q99958 501 aa12.63□□□□□ -0.39
MCF2L-232ENST00000535094 MLST8Q9BVC4 326 aa12.63□□□□□ -0.39
MCF2L-232ENST00000535094 ZNF492Q9P255 531 aa12.63□□□□□ -0.39
MCF2L-232ENST00000535094 DKK2Q9UBU2 259 aa12.63□□□□□ -0.39
MCF2L-232ENST00000535094 GTSCR1Q86UQ5 136 aa12.63□□□□□ -0.39
MCF2L-232ENST00000535094 RNASE6Q93091 150 aaKnown RBP12.63□□□□□ -0.39
MCF2L-232ENST00000535094 PTPRQQ9UMZ3 2332 aa12.62□□□□□ -0.39
MCF2L-232ENST00000535094 GOSR1O95249 250 aa12.62□□□□□ -0.39
MCF2L-232ENST00000535094 IGLV2-23P01705 113 aa12.62□□□□□ -0.39
MCF2L-232ENST00000535094 LEPP41159 167 aa12.62□□□□□ -0.39
MCF2L-232ENST00000535094 LINC01560Q8TB33 94 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms