RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 A6NDN8 102 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 DPRXA6NFQ7 191 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 ZNF736B4DX44 427 aaPredicted RBP2.4□□□□□ -2.03
USP48-215ENST00000534705 J3QLW9 94 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 TRAF3IP2O43734 574 aaPredicted RBP2.4□□□□□ -2.03
USP48-215ENST00000534705 CD5LO43866 347 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 OR7C2O60412 319 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 DUSP14O95147 198 aaKnown RBP2.4□□□□□ -2.03
USP48-215ENST00000534705 HRASP01112 189 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 P0C879 139 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 FKBP2P26885 142 aaKnown RBP2.4□□□□□ -2.03
USP48-215ENST00000534705 S100A7P31151 101 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 REG1BP48304 166 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 RHOBP62745 196 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 RPL32P62910 135 aaKnown RBP2.4□□□□□ -2.03
USP48-215ENST00000534705 QRFPP83859 136 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 BAXQ07812 192 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 PSG5Q15238 335 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 OR1Q1Q15612 314 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 LINC01590Q5TEZ4 76 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 C1orf140Q5VVS0 124 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 DUX4L9Q6RFH8 374 aaPredicted RBP2.4□□□□□ -2.03
USP48-215ENST00000534705 Q6ZT83 130 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 KRTAP11-1Q8IUC1 163 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 TMEM256Q8N2U0 113 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 ZNF433Q8N7K0 673 aaPredicted RBP2.4□□□□□ -2.03
USP48-215ENST00000534705 ZNF676Q8N7Q3 588 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 WDR31Q8NA23 367 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 OR2Z1Q8NG97 314 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 MFSD8Q8NHS3 518 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 SLC25A40Q8TBP6 338 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 EEF1AKMT3Q96AZ1 226 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 FAM3DQ96BQ1 224 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 ABHD14BQ96IU4 210 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 TSPAN32Q96QS1 320 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 HIST1H4GQ99525 98 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 FOXC2Q99958 501 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 PDCD1LG2Q9BQ51 273 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 RSG1Q9BU20 258 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 EIF5A2Q9GZV4 153 aaKnown RBP2.4□□□□□ -2.03
USP48-215ENST00000534705 TMEM133Q9H2Q1 129 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 OR52D1Q9H346 318 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 HES4Q9HCC6 221 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 PLEKHJ1Q9NW61 149 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 JPT1Q9UK76 154 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 SLC25A15Q9Y619 301 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 RFNGQ9Y644 331 aa2.4□□□□□ -2.03
USP48-215ENST00000534705 TRAV36DV7A0A075B6V5 113 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 BORCS7-ASMTA0A0B4J1R7 106 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 TRAV8-6A0A0B4J262 113 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 LOC102725191A0A1B0GVB3 256 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 CPSF4LA6NMK7 179 aaKnown RBP2.39□□□□□ -2.03
USP48-215ENST00000534705 H0YJW9 148 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 TMEM250H0YL14 139 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 SMKR1H3BMG3 65 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 PITX3O75364 302 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 LYZL6O75951 148 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 CDS2O95674 445 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 CYB5AP00167 134 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 GPX1P07203 203 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 ASAH2BP0C7U1 165 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 RBMY1CP0DJD4 496 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 BCL2P10415 239 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 GRPRP30550 384 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 KIR2DS2P43631 304 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 KIR2DS4P43632 304 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 SUB1P53999 127 aaKnown RBP eCLIP2.39□□□□□ -2.03
USP48-215ENST00000534705 RIPPLY3P57055 190 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 TPPP2P59282 170 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 RPL31P62899 125 aaKnown RBP2.39□□□□□ -2.03
USP48-215ENST00000534705 PSG9Q00887 426 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 TMEM249Q2WGJ8 235 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 NSUN5P1Q3KNT7 163 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 TIMM23BQ5SRD1 257 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 GLYATL3Q5SZD4 288 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 BVES-AS1Q5T3Y7 98 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 TSPO2Q5TGU0 170 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 C11orf71Q6IPW1 123 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 MRPL54Q6P161 138 aaKnown RBP2.39□□□□□ -2.03
USP48-215ENST00000534705 Q6ZS49 121 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 Q6ZVH6 145 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 PPP1R27Q86WC6 154 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 C5orf17Q8NAS9 161 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 OR5A2Q8NGI9 324 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 OR13G1Q8NGZ3 307 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 OR2T10Q8NGZ9 312 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 RNF133Q8WVZ7 376 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 MRAP2Q96G30 205 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 SFRP2Q96HF1 295 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 SCGB3A2Q96PL1 93 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 GPX7Q96SL4 187 aaPredicted RBP2.39□□□□□ -2.03
USP48-215ENST00000534705 SIGMAR1Q99720 223 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 LINC00470Q9BZP3 86 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 LPAR5Q9H1C0 372 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 BANF2Q9H503 90 aa2.39□□□□□ -2.03
USP48-215ENST00000534705 SPANXB1Q9NS25 103 aaPredicted RBP2.39□□□□□ -2.03
USP48-215ENST00000534705 A0A096LNT2 108 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 IGKV1D-43A0A0B4J1Z2 117 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 TRAV38-1A0A0B4J264 116 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 IGHV1-18A0A0C4DH31 117 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms