RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 SMKR1H3BMG3 65 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 M0R129 80 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 M0R2P5 195 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 NUPR1O60356 82 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 EPPINO95925 133 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 NAPSAO96009 420 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 MT-ND6P03923 174 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 CRISP2P16562 243 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 PPIBP23284 216 aaKnown RBP2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 PPICP45877 212 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 INSL3P51460 131 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 H2BFSP57053 126 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 TMEM258P61165 79 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 HES1Q14469 280 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 WFDC2Q14508 124 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 ZNF726P1Q15940 193 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 C9orf153Q5TBE3 101 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 FKBP1CQ5VVH2 108 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 SPATA12Q7Z6I5 190 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 DAZ4Q86SG3 579 aaKnown RBP2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 RPS19BP1Q86WX3 136 aaKnown RBP2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 C3orf56Q8N813 242 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 ZFP62Q8NB50 900 aaPredicted RBP2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 NUP35Q8NFH5 326 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 OR4K13Q8NH42 304 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 C18orf32Q8TCD1 76 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 LMX1AQ8TE12 382 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 C2orf15Q8WU43 125 aaKnown RBP2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 FGF11Q92914 225 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 FAM19A4Q96LR4 140 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 IGF2BP2-AS1Q96M15 143 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 PRELID3AQ96N28 172 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 AP1S3Q96PC3 154 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 TMEM70Q9BUB7 260 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 TMEM147Q9BVK8 224 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 SLC35B3Q9H1N7 401 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 DAZ1Q9NQZ3 744 aaKnown RBP2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 OTORQ9NRC9 128 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 RBM12B-AS1Q9P1G2 102 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 MARCOQ9UEW3 520 aaPredicted RBP2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 RPUSD1Q9UJJ7 312 aaKnown RBP2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 ZNF257Q9Y2Q1 563 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 KLK5Q9Y337 293 aaPredicted RBP2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 WASHC3Q9Y3C0 194 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 NOP16Q9Y3C1 178 aaKnown RBP2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 SPCS1Q9Y6A9 102 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 CHCHD2Q9Y6H1 151 aaPredicted RBP2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 SHROOM3Q8TF72 1996 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 GREB1Q4ZG55 1949 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 PXDNQ92626 1479 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 DLEC1Q9Y238 1755 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 DOCK11Q5JSL3 2073 aa2.26□□□□□ -2.05
ATPAF1-211ENST00000534216 ADAMTS7Q9UKP4 1686 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 EML5Q05BV3 1969 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 BAZ2BQ9UIF8 2168 aaKnown RBP2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 A0A0U1RQV1 116 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 TEX50A0A1B0GTY4 177 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 A0A1B0GV50 99 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 GRIFINA4D1Z8 144 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 IZUMO1RA6ND01 250 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 H3BUT2 72 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 GABARAPH6UMI1 98 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 H7C1H1 209 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 CCL21O00585 134 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 ISLRO14498 428 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 UQCRQO14949 82 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 CREBL2O60519 120 aaPredicted RBP2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 PITX3O75364 302 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 ZNF737O75373 536 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 PTHP01270 115 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 EIF4EP06730 217 aaKnown RBP2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 CHTF8P0CG12 524 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 RBMY1CP0DJD4 496 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 CRYGAP11844 174 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 PRSS3P35030 304 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 PPP1CCP36873 323 aaKnown RBP2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 PRDX1Q06830 199 aaKnown RBP2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 RRN3P1Q2M238 152 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 MPV17LQ2QL34 196 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 VMA21Q3ZAQ7 101 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 C1orf100Q5SVJ3 147 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 C11orf71Q6IPW1 123 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 SSX8Q7RTT4 187 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 COMMD6Q7Z4G1 85 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 PCP2Q8IVA1 136 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 ZNF101Q8IZC7 436 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 TMEM256Q8N2U0 113 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 LINC00311Q8N616 119 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 OR10P1Q8NGE3 313 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 OR4X2Q8NGF9 303 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 SGMS2Q8NHU3 365 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 TMEM158Q8WZ71 300 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 LSM10Q969L4 123 aaKnown RBP2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 EEF1AKMT3Q96AZ1 226 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 GNPNAT1Q96EK6 184 aaPredicted RBP2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 TVP23CQ96ET8 276 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 HIST1H4GQ99525 98 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 GABARAPL1Q9H0R8 117 aa2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 AMMECR1Q9Y4X0 333 aaPredicted RBP2.25□□□□□ -2.05
ATPAF1-211ENST00000534216 NCOA6Q14686 2063 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms