RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 TSSC4Q9Y5U2 329 aaPredicted RBP15.4■□□□□ 0.06
CAPN1-226ENST00000533820 AKAP6Q13023 2319 aa15.4■□□□□ 0.06
CAPN1-226ENST00000533820 ANKHD1Q8IWZ3 2542 aaKnown RBP15.4■□□□□ 0.06
CAPN1-226ENST00000533820 TEX48A0A1B0GUV7 120 aa15.4■□□□□ 0.06
CAPN1-226ENST00000533820 C17orf77Q96MU5 243 aa15.4■□□□□ 0.06
CAPN1-226ENST00000533820 BSNQ9UPA5 3926 aa15.39■□□□□ 0.05
CAPN1-226ENST00000533820 A0A1B0GXF2 115 aa15.39■□□□□ 0.05
CAPN1-226ENST00000533820 CHEK1O14757 476 aa15.39■□□□□ 0.05
CAPN1-226ENST00000533820 C3orf36Q3SXR2 165 aa15.39■□□□□ 0.05
CAPN1-226ENST00000533820 UFSP1Q6NVU6 142 aa15.39■□□□□ 0.05
CAPN1-226ENST00000533820 RAB37Q96AX2 223 aa15.39■□□□□ 0.05
CAPN1-226ENST00000533820 INSIG2Q9Y5U4 225 aa15.39■□□□□ 0.05
CAPN1-226ENST00000533820 OR4C46A6NHA9 309 aa15.39■□□□□ 0.05
CAPN1-226ENST00000533820 GP9P14770 177 aa15.39■□□□□ 0.05
CAPN1-226ENST00000533820 RASL11AQ6T310 242 aa15.39■□□□□ 0.05
CAPN1-226ENST00000533820 RNASE6Q93091 150 aaKnown RBP15.39■□□□□ 0.05
CAPN1-226ENST00000533820 TMEM70Q9BUB7 260 aa15.39■□□□□ 0.05
CAPN1-226ENST00000533820 SS18L2Q9UHA2 77 aa15.39■□□□□ 0.05
CAPN1-226ENST00000533820 PRRG2O14669 202 aa15.38■□□□□ 0.05
CAPN1-226ENST00000533820 NEGR1Q7Z3B1 354 aa15.38■□□□□ 0.05
CAPN1-226ENST00000533820 MLST8Q9BVC4 326 aa15.38■□□□□ 0.05
CAPN1-226ENST00000533820 OR2J3O76001 311 aa15.38■□□□□ 0.05
CAPN1-226ENST00000533820 KLF5Q13887 457 aaPredicted RBP15.38■□□□□ 0.05
CAPN1-226ENST00000533820 IGHV1-24A0A0C4DH33 117 aa15.37■□□□□ 0.05
CAPN1-226ENST00000533820 HSD52Q0P140 79 aa15.37■□□□□ 0.05
CAPN1-226ENST00000533820 IGFL3Q6UXB1 125 aa15.37■□□□□ 0.05
CAPN1-226ENST00000533820 TMEM133Q9H2Q1 129 aa15.37■□□□□ 0.05
CAPN1-226ENST00000533820 INS-IGF2F8WCM5 200 aa15.37■□□□□ 0.05
CAPN1-226ENST00000533820 TMEM155Q4W5P6 130 aa15.37■□□□□ 0.05
CAPN1-226ENST00000533820 HIGD1AQ9Y241 93 aa15.37■□□□□ 0.05
CAPN1-226ENST00000533820 CCDC144NLQ6NUI1 221 aa15.37■□□□□ 0.05
CAPN1-226ENST00000533820 GEMIN7Q9H840 131 aaKnown RBP15.37■□□□□ 0.05
CAPN1-226ENST00000533820 SIGLEC9Q9Y336 463 aa15.37■□□□□ 0.05
CAPN1-226ENST00000533820 LEPROTL1O95214 131 aa15.36■□□□□ 0.05
CAPN1-226ENST00000533820 SCGB1A1P11684 91 aa15.36■□□□□ 0.05
CAPN1-226ENST00000533820 TRGV9Q99603 122 aa15.36■□□□□ 0.05
CAPN1-226ENST00000533820 KLF12Q9Y4X4 402 aa15.36■□□□□ 0.05
CAPN1-226ENST00000533820 HILPDAQ9Y5L2 63 aa15.36■□□□□ 0.05
CAPN1-226ENST00000533820 DLX6P56179 175 aa15.36■□□□□ 0.05
CAPN1-226ENST00000533820 NPFFR1Q9GZQ6 430 aa15.36■□□□□ 0.05
CAPN1-226ENST00000533820 LTAP01374 205 aa15.35■□□□□ 0.05
CAPN1-226ENST00000533820 CRYGCP07315 174 aa15.35■□□□□ 0.05
CAPN1-226ENST00000533820 KLF17Q5JT82 389 aaPredicted RBP15.35■□□□□ 0.05
CAPN1-226ENST00000533820 C8orf46Q8TAG6 207 aa15.35■□□□□ 0.05
CAPN1-226ENST00000533820 CNIH1O95406 144 aa15.35■□□□□ 0.05
CAPN1-226ENST00000533820 GATA3P23771 443 aa15.35■□□□□ 0.05
CAPN1-226ENST00000533820 PRR30Q53SZ7 412 aaPredicted RBP15.35■□□□□ 0.05
CAPN1-226ENST00000533820 RBPMS2Q6ZRY4 209 aaKnown RBP15.35■□□□□ 0.05
CAPN1-226ENST00000533820 PPP1R27Q86WC6 154 aa15.35■□□□□ 0.05
CAPN1-226ENST00000533820 TMEM116Q8NCL8 245 aa15.35■□□□□ 0.05
CAPN1-226ENST00000533820 TCTAP57738 103 aa15.35■□□□□ 0.05
CAPN1-226ENST00000533820 FAM120AOSQ5T036 256 aa15.35■□□□□ 0.05
CAPN1-226ENST00000533820 ATP5L2Q7Z4Y8 100 aa15.35■□□□□ 0.05
CAPN1-226ENST00000533820 SRSF12Q8WXF0 261 aaKnown RBP15.35■□□□□ 0.05
CAPN1-226ENST00000533820 FMC1Q96HJ9 113 aa15.35■□□□□ 0.05
CAPN1-226ENST00000533820 SLC25A39Q9BZJ4 359 aaPredicted RBP15.35■□□□□ 0.05
CAPN1-226ENST00000533820 PRSS22Q9GZN4 317 aa15.35■□□□□ 0.05
CAPN1-226ENST00000533820 ATRXP46100 2492 aa15.34■□□□□ 0.05
CAPN1-226ENST00000533820 E7EQL1 145 aa15.34■□□□□ 0.05
CAPN1-226ENST00000533820 GFRALQ6UXV0 394 aa15.34■□□□□ 0.05
CAPN1-226ENST00000533820 OR2K2Q8NGT1 345 aa15.34■□□□□ 0.05
CAPN1-226ENST00000533820 ABHD17AQ96GS6 310 aa15.34■□□□□ 0.05
CAPN1-226ENST00000533820 TMSB15BA0A087X1C1 80 aa15.34■□□□□ 0.05
CAPN1-226ENST00000533820 C19orf71A6NCJ1 209 aa15.34■□□□□ 0.05
CAPN1-226ENST00000533820 GAGE12HA6NDE8 117 aa15.34■□□□□ 0.05
CAPN1-226ENST00000533820 Q86TA4 180 aa15.34■□□□□ 0.05
CAPN1-226ENST00000533820 LINC00311Q8N616 119 aa15.34■□□□□ 0.05
CAPN1-226ENST00000533820 IGHV1-3A0A0C4DH29 117 aa15.33■□□□□ 0.05
CAPN1-226ENST00000533820 HTR1DP28221 377 aa15.33■□□□□ 0.05
CAPN1-226ENST00000533820 C1orf122Q6ZSJ8 110 aa15.33■□□□□ 0.05
CAPN1-226ENST00000533820 RASL11BQ9BPW5 248 aa15.33■□□□□ 0.05
CAPN1-226ENST00000533820 SYS1-DBNDD2H3BUS1 97 aa15.33■□□□□ 0.04
CAPN1-226ENST00000533820 ZNF479Q96JC4 524 aa15.33■□□□□ 0.04
CAPN1-226ENST00000533820 ST20Q9HBF5 79 aa15.33■□□□□ 0.04
CAPN1-226ENST00000533820 MUC6Q6W4X9 2439 aa15.33■□□□□ 0.04
CAPN1-226ENST00000533820 K7EP34 96 aa15.32■□□□□ 0.04
CAPN1-226ENST00000533820 M0R3E3 92 aa15.32■□□□□ 0.04
CAPN1-226ENST00000533820 LY6HO94772 140 aa15.32■□□□□ 0.04
CAPN1-226ENST00000533820 TMUB1Q9BVT8 246 aa15.32■□□□□ 0.04
CAPN1-226ENST00000533820 F11RQ9Y624 299 aaKnown RBP15.32■□□□□ 0.04
CAPN1-226ENST00000533820 ARMS2P0C7Q2 107 aa15.32■□□□□ 0.04
CAPN1-226ENST00000533820 BCL6BQ8N143 479 aaPredicted RBP15.32■□□□□ 0.04
CAPN1-226ENST00000533820 TEX45Q8NA69 505 aa15.32■□□□□ 0.04
CAPN1-226ENST00000533820 RPEQ96AT9 228 aa15.32■□□□□ 0.04
CAPN1-226ENST00000533820 TNFRSF13BO14836 293 aaPredicted RBP15.32■□□□□ 0.04
CAPN1-226ENST00000533820 GPR183P32249 361 aa15.32■□□□□ 0.04
CAPN1-226ENST00000533820 JKAMPQ9P055 326 aa15.32■□□□□ 0.04
CAPN1-226ENST00000533820 TEX22C9J3V5 150 aa15.31■□□□□ 0.04
CAPN1-226ENST00000533820 OR10AG1Q8NH19 301 aa15.31■□□□□ 0.04
CAPN1-226ENST00000533820 PSG3Q16557 428 aa15.31■□□□□ 0.04
CAPN1-226ENST00000533820 SPCS1Q9Y6A9 102 aa15.31■□□□□ 0.04
CAPN1-226ENST00000533820 COL6A6A6NMZ7 2263 aa15.31■□□□□ 0.04
CAPN1-226ENST00000533820 FXYD7P58549 80 aa15.3■□□□□ 0.04
CAPN1-226ENST00000533820 ONECUT1Q9UBC0 465 aa15.3■□□□□ 0.04
CAPN1-226ENST00000533820 VSTM5A8MXK1 200 aa15.29■□□□□ 0.04
CAPN1-226ENST00000533820 BUB1B-PAK6H3BSN5 160 aa15.29■□□□□ 0.04
CAPN1-226ENST00000533820 IGKV1-17P01599 117 aa15.29■□□□□ 0.04
CAPN1-226ENST00000533820 IGLV2-11P01706 119 aa15.29■□□□□ 0.04
CAPN1-226ENST00000533820 ASCL5Q7RTU5 278 aa15.29■□□□□ 0.04
CAPN1-226ENST00000533820 RALYQ9UKM9 306 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms