RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 LYPD1Q8N2G4 141 aa9.1□□□□□ -0.95
AMBRA1-211ENST00000533727 IFI27L1Q96BM0 104 aa9.1□□□□□ -0.95
AMBRA1-211ENST00000533727 COX11Q9Y6N1 276 aa9.1□□□□□ -0.95
AMBRA1-211ENST00000533727 TRAV8-4A0A0B4J246 113 aa9.1□□□□□ -0.95
AMBRA1-211ENST00000533727 IGHV4-39P01824 125 aa9.1□□□□□ -0.95
AMBRA1-211ENST00000533727 C3orf79P0CE67 100 aa9.1□□□□□ -0.95
AMBRA1-211ENST00000533727 SNHG12Q9BXW3 62 aa9.1□□□□□ -0.95
AMBRA1-211ENST00000533727 EPDR1Q9UM22 224 aa9.1□□□□□ -0.95
AMBRA1-211ENST00000533727 FER1L5A0AVI2 2057 aa9.1□□□□□ -0.95
AMBRA1-211ENST00000533727 ABCA1O95477 2261 aa9.1□□□□□ -0.95
AMBRA1-211ENST00000533727 ATP6V0E1O15342 81 aa9.1□□□□□ -0.95
AMBRA1-211ENST00000533727 ATP5L2Q7Z4Y8 100 aa9.1□□□□□ -0.95
AMBRA1-211ENST00000533727 LINC01551Q86U37 167 aa9.1□□□□□ -0.95
AMBRA1-211ENST00000533727 PRADC1Q9BSG0 188 aa9.1□□□□□ -0.95
AMBRA1-211ENST00000533727 RHPN1-AS1Q9BWJ2 59 aa9.1□□□□□ -0.95
AMBRA1-211ENST00000533727 ZNF503-AS2A6NEH8 195 aa9.09□□□□□ -0.95
AMBRA1-211ENST00000533727 ZNF415Q09FC8 603 aa9.09□□□□□ -0.95
AMBRA1-211ENST00000533727 HS3ST6Q96QI5 342 aa9.09□□□□□ -0.95
AMBRA1-211ENST00000533727 C20orf144Q9BQM9 153 aa9.09□□□□□ -0.95
AMBRA1-211ENST00000533727 GATA2P23769 480 aaPredicted RBP9.09□□□□□ -0.95
AMBRA1-211ENST00000533727 LHFPL4Q7Z7J7 247 aa9.09□□□□□ -0.95
AMBRA1-211ENST00000533727 RFNGQ9Y644 331 aa9.09□□□□□ -0.95
AMBRA1-211ENST00000533727 CD5LO43866 347 aa9.09□□□□□ -0.95
AMBRA1-211ENST00000533727 OCIAD2Q56VL3 154 aa9.09□□□□□ -0.95
AMBRA1-211ENST00000533727 TSKUQ8WUA8 353 aa9.09□□□□□ -0.95
AMBRA1-211ENST00000533727 NXT2Q9NPJ8 142 aaKnown RBP9.09□□□□□ -0.95
AMBRA1-211ENST00000533727 PSG8Q9UQ74 426 aa9.09□□□□□ -0.95
AMBRA1-211ENST00000533727 NTF4P34130 210 aa9.08□□□□□ -0.96
AMBRA1-211ENST00000533727 APOC4P55056 127 aa9.08□□□□□ -0.96
AMBRA1-211ENST00000533727 VSIRQ9H7M9 311 aa9.08□□□□□ -0.96
AMBRA1-211ENST00000533727 TSSC4Q9Y5U2 329 aaPredicted RBP9.08□□□□□ -0.96
AMBRA1-211ENST00000533727 PKDREJQ9NTG1 2253 aa9.08□□□□□ -0.96
AMBRA1-211ENST00000533727 LINC00473A8K010 186 aa9.08□□□□□ -0.96
AMBRA1-211ENST00000533727 PPBPP02775 128 aa9.08□□□□□ -0.96
AMBRA1-211ENST00000533727 PAX2Q02962 417 aa9.08□□□□□ -0.96
AMBRA1-211ENST00000533727 SELENOKQ9Y6D0 94 aa9.08□□□□□ -0.96
AMBRA1-211ENST00000533727 IGHV4-61A0A0C4DH41 118 aa9.08□□□□□ -0.96
AMBRA1-211ENST00000533727 LINC01549A6NIU2 74 aa9.08□□□□□ -0.96
AMBRA1-211ENST00000533727 BCL6BQ8N143 479 aaPredicted RBP9.08□□□□□ -0.96
AMBRA1-211ENST00000533727 SLC25A39Q9BZJ4 359 aaPredicted RBP9.08□□□□□ -0.96
AMBRA1-211ENST00000533727 SYNJ2BPP57105 145 aa9.08□□□□□ -0.96
AMBRA1-211ENST00000533727 YPEL3P61236 119 aaPredicted RBP9.08□□□□□ -0.96
AMBRA1-211ENST00000533727 C17orf58Q2M2W7 97 aa9.08□□□□□ -0.96
AMBRA1-211ENST00000533727 TREML4Q6UXN2 200 aa9.08□□□□□ -0.96
AMBRA1-211ENST00000533727 WDR86Q86TI4 376 aa9.08□□□□□ -0.96
AMBRA1-211ENST00000533727 SCN8AQ9UQD0 1980 aa9.08□□□□□ -0.96
AMBRA1-211ENST00000533727 IGHV4-30-2A0A087WSY4 118 aa9.07□□□□□ -0.96
AMBRA1-211ENST00000533727 NPIPB5A8MRT5 1133 aa9.07□□□□□ -0.96
AMBRA1-211ENST00000533727 IGKV1-5P01602 117 aa9.07□□□□□ -0.96
AMBRA1-211ENST00000533727 CST9LQ9H4G1 147 aa9.07□□□□□ -0.96
AMBRA1-211ENST00000533727 MYLKQ15746 1914 aa9.07□□□□□ -0.96
AMBRA1-211ENST00000533727 A0A087X0K7 114 aa9.07□□□□□ -0.96
AMBRA1-211ENST00000533727 OVOL3O00110 214 aa9.07□□□□□ -0.96
AMBRA1-211ENST00000533727 IGLV3-1P01715 115 aa9.07□□□□□ -0.96
AMBRA1-211ENST00000533727 IGKCP01834 107 aa9.07□□□□□ -0.96
AMBRA1-211ENST00000533727 TMEM14EPQ6UXP3 125 aa9.07□□□□□ -0.96
AMBRA1-211ENST00000533727 Q71RC1 249 aaPredicted RBP9.07□□□□□ -0.96
AMBRA1-211ENST00000533727 FAM208BQ5VWN6 2430 aa9.07□□□□□ -0.96
AMBRA1-211ENST00000533727 F2Z2F3 143 aa9.07□□□□□ -0.96
AMBRA1-211ENST00000533727 TMEM158Q8WZ71 300 aa9.07□□□□□ -0.96
AMBRA1-211ENST00000533727 AGMATQ9BSE5 352 aa9.07□□□□□ -0.96
AMBRA1-211ENST00000533727 PLXND1Q9Y4D7 1925 aa9.07□□□□□ -0.96
AMBRA1-211ENST00000533727 ZNF688P0C7X2 276 aa9.07□□□□□ -0.96
AMBRA1-211ENST00000533727 RNASE2P10153 161 aaKnown RBP9.07□□□□□ -0.96
AMBRA1-211ENST00000533727 SMPXQ9UHP9 88 aa9.07□□□□□ -0.96
AMBRA1-211ENST00000533727 OR11H6Q8NGC7 330 aa9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 GGTLC1Q9BX51 225 aa9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 NDUFA4O00483 81 aa9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 CRPP02741 224 aa9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 ZNF138P52744 262 aa9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 GUSBP1Q15486 140 aa9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 DEFB112Q30KQ8 113 aa9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 LINC01559Q495D7 138 aa9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 RASL11AQ6T310 242 aa9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 PRSS57Q6UWY2 283 aa9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 ZNF843Q8N446 348 aa9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 ZGRF1Q86YA3 2104 aa9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 ZNF815PA8K554 130 aa9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 H3BRM9 83 aa9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 NPSP0C0P6 89 aa9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 LOXL1Q08397 574 aaPredicted RBP9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 DOPEY2Q9Y3R5 2298 aa9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 TRAV5A0A0B4J249 113 aa9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 hDV102S1A0JD36 115 aa9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 PDE6HQ13956 83 aa9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 SPATA31B1PQ5VZV4 182 aa9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 RPP25LQ8N5L8 163 aaKnown RBP9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 GLMPQ8WWB7 406 aa9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 POLR3KQ9Y2Y1 108 aaPredicted RBP9.06□□□□□ -0.96
AMBRA1-211ENST00000533727 C22orf46C9J442 243 aa9.05□□□□□ -0.96
AMBRA1-211ENST00000533727 SPINK8P0C7L1 97 aa9.05□□□□□ -0.96
AMBRA1-211ENST00000533727 HOXB4P17483 251 aaPredicted RBP9.05□□□□□ -0.96
AMBRA1-211ENST00000533727 GNG5P63218 68 aa9.05□□□□□ -0.96
AMBRA1-211ENST00000533727 KLF17Q5JT82 389 aaPredicted RBP9.05□□□□□ -0.96
AMBRA1-211ENST00000533727 TMEM86BQ8N661 226 aa9.05□□□□□ -0.96
AMBRA1-211ENST00000533727 VGLL1Q99990 258 aa9.05□□□□□ -0.96
AMBRA1-211ENST00000533727 MRPL27Q9P0M9 148 aaKnown RBP9.05□□□□□ -0.96
AMBRA1-211ENST00000533727 OTOGLQ3ZCN5 2332 aa9.05□□□□□ -0.96
AMBRA1-211ENST00000533727 KIR3DS1Q14943 382 aa9.05□□□□□ -0.96
AMBRA1-211ENST00000533727 SEM1Q6ZVN7 128 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms