RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 PRR20AP86496 221 aa11.52□□□□□ -0.57
CHMP4A-207ENST00000533523 IFITM2Q01629 132 aa11.52□□□□□ -0.57
CHMP4A-207ENST00000533523 TEX261Q6UWH6 196 aa11.52□□□□□ -0.57
CHMP4A-207ENST00000533523 TCF24Q7RTU0 167 aa11.52□□□□□ -0.57
CHMP4A-207ENST00000533523 GBGT1Q8N5D6 347 aa11.52□□□□□ -0.57
CHMP4A-207ENST00000533523 PHYHIPLQ96FC7 376 aa11.52□□□□□ -0.57
CHMP4A-207ENST00000533523 GRAMD2BQ96HH9 432 aa11.52□□□□□ -0.57
CHMP4A-207ENST00000533523 SLC39A9Q9NUM3 307 aa11.52□□□□□ -0.57
CHMP4A-207ENST00000533523 PLA2G2EQ9NZK7 142 aa11.52□□□□□ -0.57
CHMP4A-207ENST00000533523 IGHV3OR16-13A0A075B7E8 117 aa11.51□□□□□ -0.57
CHMP4A-207ENST00000533523 IGHV3-74A0A0B4J1X5 117 aa11.51□□□□□ -0.57
CHMP4A-207ENST00000533523 PSG1P11464 419 aa11.51□□□□□ -0.57
CHMP4A-207ENST00000533523 CRYBB3P26998 211 aa11.51□□□□□ -0.57
CHMP4A-207ENST00000533523 SERF2P84101 59 aa11.51□□□□□ -0.57
CHMP4A-207ENST00000533523 FAM90A2PQ658T7 463 aa11.51□□□□□ -0.57
CHMP4A-207ENST00000533523 ZNF680Q8NEM1 530 aa11.51□□□□□ -0.57
CHMP4A-207ENST00000533523 C2CD4CQ8TF44 421 aa11.51□□□□□ -0.57
CHMP4A-207ENST00000533523 TRAV2A0A0B4J234 112 aa11.5□□□□□ -0.57
CHMP4A-207ENST00000533523 IFNA7P01567 189 aa11.5□□□□□ -0.57
CHMP4A-207ENST00000533523 FAM74A1Q5RGS3 127 aa11.5□□□□□ -0.57
CHMP4A-207ENST00000533523 AKR1C8PQ5T2L2 129 aa11.5□□□□□ -0.57
CHMP4A-207ENST00000533523 DNASE2O00115 360 aaPredicted RBP11.49□□□□□ -0.57
CHMP4A-207ENST00000533523 APOHP02749 345 aaPredicted RBP11.49□□□□□ -0.57
CHMP4A-207ENST00000533523 RAB2AP61019 212 aa11.49□□□□□ -0.57
CHMP4A-207ENST00000533523 LYZP61626 148 aa11.49□□□□□ -0.57
CHMP4A-207ENST00000533523 RPL11P62913 178 aaKnown RBP11.49□□□□□ -0.57
CHMP4A-207ENST00000533523 ACOT6Q3I5F7 207 aaPredicted RBP11.49□□□□□ -0.57
CHMP4A-207ENST00000533523 GCSAMLQ5JQS6 135 aa11.49□□□□□ -0.57
CHMP4A-207ENST00000533523 Q6ZRG5 221 aa11.49□□□□□ -0.57
CHMP4A-207ENST00000533523 OR51G1Q8NGK1 321 aa11.49□□□□□ -0.57
CHMP4A-207ENST00000533523 DOK5Q9P104 306 aa11.49□□□□□ -0.57
CHMP4A-207ENST00000533523 IGHV3-66A0A0C4DH42 116 aa11.48□□□□□ -0.57
CHMP4A-207ENST00000533523 UMAD1C9J7I0 102 aa11.48□□□□□ -0.57
CHMP4A-207ENST00000533523 MBP02144 154 aa11.48□□□□□ -0.57
CHMP4A-207ENST00000533523 IL4P05112 153 aa11.48□□□□□ -0.57
CHMP4A-207ENST00000533523 SULT1A2P50226 295 aa11.48□□□□□ -0.57
CHMP4A-207ENST00000533523 PLP1P60201 277 aa11.48□□□□□ -0.57
CHMP4A-207ENST00000533523 TMEM41BQ5BJD5 291 aa11.48□□□□□ -0.57
CHMP4A-207ENST00000533523 PFDN2Q9UHV9 154 aa11.48□□□□□ -0.57
CHMP4A-207ENST00000533523 HELTA6NFD8 242 aa11.47□□□□□ -0.57
CHMP4A-207ENST00000533523 IGLL5B9A064 214 aa11.47□□□□□ -0.57
CHMP4A-207ENST00000533523 COX7A2P2O60397 106 aa11.47□□□□□ -0.57
CHMP4A-207ENST00000533523 HYPMO75409 117 aa11.47□□□□□ -0.57
CHMP4A-207ENST00000533523 ORM2P19652 201 aa11.47□□□□□ -0.57
CHMP4A-207ENST00000533523 M6PRP20645 277 aa11.47□□□□□ -0.57
CHMP4A-207ENST00000533523 PXDC1Q5TGL8 231 aa11.47□□□□□ -0.57
CHMP4A-207ENST00000533523 LEMD1Q68G75 181 aa11.47□□□□□ -0.57
CHMP4A-207ENST00000533523 OR1L4Q8NGR5 311 aa11.47□□□□□ -0.57
CHMP4A-207ENST00000533523 OR1B1Q8NGR6 318 aa11.47□□□□□ -0.57
CHMP4A-207ENST00000533523 RNF125Q96EQ8 232 aa11.47□□□□□ -0.57
CHMP4A-207ENST00000533523 PBDC1Q9BVG4 233 aa11.47□□□□□ -0.57
CHMP4A-207ENST00000533523 MS4A6AQ9H2W1 248 aa11.47□□□□□ -0.57
CHMP4A-207ENST00000533523 RPRMQ9NS64 109 aa11.47□□□□□ -0.57
CHMP4A-207ENST00000533523 RABAC1Q9UI14 185 aa11.47□□□□□ -0.57
CHMP4A-207ENST00000533523 LRP1BQ9NZR2 4599 aa11.47□□□□□ -0.57
CHMP4A-207ENST00000533523 OR5G3P0C626 314 aa11.46□□□□□ -0.57
CHMP4A-207ENST00000533523 RAB5CP51148 216 aa11.46□□□□□ -0.57
CHMP4A-207ENST00000533523 TCTAP57738 103 aa11.46□□□□□ -0.57
CHMP4A-207ENST00000533523 USF2Q15853 346 aaPredicted RBP11.46□□□□□ -0.57
CHMP4A-207ENST00000533523 FAM122CQ6P4D5 195 aa11.46□□□□□ -0.57
CHMP4A-207ENST00000533523 PATE2Q6UY27 113 aa11.46□□□□□ -0.57
CHMP4A-207ENST00000533523 ZNF767PQ75MW2 155 aa11.46□□□□□ -0.57
CHMP4A-207ENST00000533523 OR10G4Q8NGN3 311 aa11.46□□□□□ -0.57
CHMP4A-207ENST00000533523 OR10G9Q8NGN4 311 aa11.46□□□□□ -0.57
CHMP4A-207ENST00000533523 OR10G7Q8NGN6 311 aa11.46□□□□□ -0.57
CHMP4A-207ENST00000533523 FAM213BQ8TBF2 198 aa11.46□□□□□ -0.57
CHMP4A-207ENST00000533523 PFDN5Q99471 154 aa11.46□□□□□ -0.57
CHMP4A-207ENST00000533523 DNAJC4Q9NNZ3 241 aa11.46□□□□□ -0.57
CHMP4A-207ENST00000533523 U3KQE9 123 aa11.46□□□□□ -0.57
CHMP4A-207ENST00000533523 APOBP04114 4563 aaKnown RBP11.46□□□□□ -0.58
CHMP4A-207ENST00000533523 ELOA3CA0A087WX78 387 aaPredicted RBP11.45□□□□□ -0.58
CHMP4A-207ENST00000533523 FHITP49789 147 aa11.45□□□□□ -0.58
CHMP4A-207ENST00000533523 DEFB131AP59861 70 aa11.45□□□□□ -0.58
CHMP4A-207ENST00000533523 C10orf113Q5VZT2 155 aa11.45□□□□□ -0.58
CHMP4A-207ENST00000533523 DPPA3Q6W0C5 159 aa11.45□□□□□ -0.58
CHMP4A-207ENST00000533523 STXBP6Q8NFX7 210 aa11.45□□□□□ -0.58
CHMP4A-207ENST00000533523 RNF141Q8WVD5 230 aa11.45□□□□□ -0.58
CHMP4A-207ENST00000533523 TMEM37Q8WXS4 190 aa11.45□□□□□ -0.58
CHMP4A-207ENST00000533523 HIGD1AQ9Y241 93 aa11.45□□□□□ -0.58
CHMP4A-207ENST00000533523 ZNF705EA8MWA4 302 aaPredicted RBP11.44□□□□□ -0.58
CHMP4A-207ENST00000533523 RHOBP62745 196 aa11.44□□□□□ -0.58
CHMP4A-207ENST00000533523 SPATA31B1PQ5VZV4 182 aa11.44□□□□□ -0.58
CHMP4A-207ENST00000533523 C16orf54Q6UWD8 224 aa11.44□□□□□ -0.58
CHMP4A-207ENST00000533523 STHQ8IWL8 128 aa11.44□□□□□ -0.58
CHMP4A-207ENST00000533523 Q8NAQ8 132 aa11.44□□□□□ -0.58
CHMP4A-207ENST00000533523 ACTR3CQ9C0K3 210 aaPredicted RBP11.44□□□□□ -0.58
CHMP4A-207ENST00000533523 SLC25A22Q9H936 323 aa11.44□□□□□ -0.58
CHMP4A-207ENST00000533523 APLNQ9ULZ1 77 aa11.44□□□□□ -0.58
CHMP4A-207ENST00000533523 C11orf94C9JXX5 98 aa11.43□□□□□ -0.58
CHMP4A-207ENST00000533523 RGS13O14921 159 aa11.43□□□□□ -0.58
CHMP4A-207ENST00000533523 EIF3GO75821 320 aaKnown RBP eCLIP11.43□□□□□ -0.58
CHMP4A-207ENST00000533523 CDC34P49427 236 aaPredicted RBP11.43□□□□□ -0.58
CHMP4A-207ENST00000533523 ZNF726P1Q15940 193 aa11.43□□□□□ -0.58
CHMP4A-207ENST00000533523 FAM78BQ5VT40 261 aa11.43□□□□□ -0.58
CHMP4A-207ENST00000533523 SSX7Q7RTT5 188 aa11.43□□□□□ -0.58
CHMP4A-207ENST00000533523 FAM24BQ8N5W8 94 aa11.43□□□□□ -0.58
CHMP4A-207ENST00000533523 GLMPQ8WWB7 406 aa11.43□□□□□ -0.58
CHMP4A-207ENST00000533523 UHRF2Q96PU4 802 aa11.43□□□□□ -0.58
CHMP4A-207ENST00000533523 FUT9Q9Y231 359 aa11.43□□□□□ -0.58
CHMP4A-207ENST00000533523 IGHV4-28A0A0C4DH34 117 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms