RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 NDUFB4O95168 129 aa10.62□□□□□ -0.71
HIF3A-215ENST00000533145 IGLV1-51P01701 117 aa10.62□□□□□ -0.71
HIF3A-215ENST00000533145 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.62□□□□□ -0.71
HIF3A-215ENST00000533145 DYNLRB2Q8TF09 96 aa10.62□□□□□ -0.71
HIF3A-215ENST00000533145 NKX6-2Q9C056 277 aaPredicted RBP10.62□□□□□ -0.71
HIF3A-215ENST00000533145 NRN1Q9NPD7 142 aa10.62□□□□□ -0.71
HIF3A-215ENST00000533145 MANBALQ9NQG1 85 aa10.62□□□□□ -0.71
HIF3A-215ENST00000533145 A0A1B0GV50 99 aa10.61□□□□□ -0.71
HIF3A-215ENST00000533145 LINC00862A6NCI5 91 aa10.61□□□□□ -0.71
HIF3A-215ENST00000533145 TSPAN4O14817 238 aa10.61□□□□□ -0.71
HIF3A-215ENST00000533145 NDUFS6O75380 124 aaKnown RBP10.61□□□□□ -0.71
HIF3A-215ENST00000533145 IFNA1P01562 189 aa10.61□□□□□ -0.71
HIF3A-215ENST00000533145 CD33P20138 364 aa10.61□□□□□ -0.71
HIF3A-215ENST00000533145 C9orf66Q5T8R8 295 aa10.61□□□□□ -0.71
HIF3A-215ENST00000533145 SAMD13Q5VXD3 122 aa10.61□□□□□ -0.71
HIF3A-215ENST00000533145 IQCF2Q8IXL9 164 aa10.61□□□□□ -0.71
HIF3A-215ENST00000533145 FAM210AQ96ND0 272 aa10.61□□□□□ -0.71
HIF3A-215ENST00000533145 TXNDC17Q9BRA2 123 aa10.61□□□□□ -0.71
HIF3A-215ENST00000533145 SLC50A1Q9BRV3 221 aa10.61□□□□□ -0.71
HIF3A-215ENST00000533145 CLEC5AQ9NY25 188 aa10.61□□□□□ -0.71
HIF3A-215ENST00000533145 RBFOX3A6NFN3 312 aa10.6□□□□□ -0.71
HIF3A-215ENST00000533145 FAM74A7A6NL05 159 aa10.6□□□□□ -0.71
HIF3A-215ENST00000533145 SOCS3O14543 225 aa10.6□□□□□ -0.71
HIF3A-215ENST00000533145 WIPF1O43516 503 aa10.6□□□□□ -0.71
HIF3A-215ENST00000533145 SAP30O75446 220 aa10.6□□□□□ -0.71
HIF3A-215ENST00000533145 PAFAH1B2P68402 229 aa10.6□□□□□ -0.71
HIF3A-215ENST00000533145 PSG9Q00887 426 aa10.6□□□□□ -0.71
HIF3A-215ENST00000533145 CD300EQ496F6 205 aaPredicted RBP10.6□□□□□ -0.71
HIF3A-215ENST00000533145 ARL6IP6Q8N6S5 226 aa10.6□□□□□ -0.71
HIF3A-215ENST00000533145 DCANP1Q8TF63 244 aa10.6□□□□□ -0.71
HIF3A-215ENST00000533145 BLNKQ8WV28 456 aa10.6□□□□□ -0.71
HIF3A-215ENST00000533145 MS4A6AQ9H2W1 248 aa10.6□□□□□ -0.71
HIF3A-215ENST00000533145 ZNF331Q9NQX6 463 aaPredicted RBP10.6□□□□□ -0.71
HIF3A-215ENST00000533145 GNG13Q9P2W3 67 aa10.6□□□□□ -0.71
HIF3A-215ENST00000533145 RAB19A4D1S5 217 aa10.59□□□□□ -0.71
HIF3A-215ENST00000533145 K7EQG2 157 aa10.59□□□□□ -0.71
HIF3A-215ENST00000533145 PAGE4O60829 102 aa10.59□□□□□ -0.71
HIF3A-215ENST00000533145 BCL2P10415 239 aa10.59□□□□□ -0.71
HIF3A-215ENST00000533145 RPL11P62913 178 aaKnown RBP10.59□□□□□ -0.71
HIF3A-215ENST00000533145 ZNF506Q5JVG8 444 aa10.59□□□□□ -0.71
HIF3A-215ENST00000533145 RBPMS2Q6ZRY4 209 aaKnown RBP10.59□□□□□ -0.71
HIF3A-215ENST00000533145 CCDC28AQ8IWP9 274 aa10.59□□□□□ -0.71
HIF3A-215ENST00000533145 TMEM61Q8N0U2 210 aa10.59□□□□□ -0.71
HIF3A-215ENST00000533145 SMDT1Q9H4I9 107 aa10.59□□□□□ -0.71
HIF3A-215ENST00000533145 VAX2Q9UIW0 290 aa10.59□□□□□ -0.71
HIF3A-215ENST00000533145 YTHDF2Q9Y5A9 579 aaKnown RBP10.59□□□□□ -0.71
HIF3A-215ENST00000533145 LOC102723971A0A1B0GUV8 181 aa10.58□□□□□ -0.72
HIF3A-215ENST00000533145 SLC17A3O00476 420 aa10.58□□□□□ -0.72
HIF3A-215ENST00000533145 ISLRO14498 428 aa10.58□□□□□ -0.72
HIF3A-215ENST00000533145 SNRPCP09234 159 aaKnown RBP10.58□□□□□ -0.72
HIF3A-215ENST00000533145 RANP62826 216 aaKnown RBP10.58□□□□□ -0.72
HIF3A-215ENST00000533145 SPAG8Q99932 426 aaPredicted RBP10.58□□□□□ -0.72
HIF3A-215ENST00000533145 Q9H3A6 140 aa10.58□□□□□ -0.72
HIF3A-215ENST00000533145 OTORQ9NRC9 128 aa10.58□□□□□ -0.72
HIF3A-215ENST00000533145 PRELID1Q9Y255 219 aa10.58□□□□□ -0.72
HIF3A-215ENST00000533145 TRAV8-2A0A0B4J237 113 aa10.57□□□□□ -0.72
HIF3A-215ENST00000533145 PGPA6NDG6 321 aa10.57□□□□□ -0.72
HIF3A-215ENST00000533145 H3BTX0 84 aa10.57□□□□□ -0.72
HIF3A-215ENST00000533145 DNASE2O00115 360 aaPredicted RBP10.57□□□□□ -0.72
HIF3A-215ENST00000533145 UBE2G2P60604 165 aa10.57□□□□□ -0.72
HIF3A-215ENST00000533145 SUMO1P63165 101 aaKnown RBP10.57□□□□□ -0.72
HIF3A-215ENST00000533145 HAGHQ16775 308 aa10.57□□□□□ -0.72
HIF3A-215ENST00000533145 PRR31Q5SQ13 230 aa10.57□□□□□ -0.72
HIF3A-215ENST00000533145 EIF4E3Q8N5X7 224 aaKnown RBP10.57□□□□□ -0.72
HIF3A-215ENST00000533145 MRPL53Q96EL3 112 aaKnown RBP10.57□□□□□ -0.72
HIF3A-215ENST00000533145 C16orf92Q96LL3 132 aa10.57□□□□□ -0.72
HIF3A-215ENST00000533145 RARRES2Q99969 163 aa10.57□□□□□ -0.72
HIF3A-215ENST00000533145 TCEAL7Q9BRU2 100 aa10.57□□□□□ -0.72
HIF3A-215ENST00000533145 GPR61Q9BZJ8 451 aa10.57□□□□□ -0.72
HIF3A-215ENST00000533145 AAMDCQ9H7C9 122 aa10.57□□□□□ -0.72
HIF3A-215ENST00000533145 ANK2Q01484 3957 aa10.56□□□□□ -0.72
HIF3A-215ENST00000533145 IZUMO1RA6ND01 250 aa10.56□□□□□ -0.72
HIF3A-215ENST00000533145 GGTLC3B5MD39 225 aa10.56□□□□□ -0.72
HIF3A-215ENST00000533145 ID1P41134 155 aa10.56□□□□□ -0.72
HIF3A-215ENST00000533145 MEF2BQ02080 365 aaPredicted RBP10.56□□□□□ -0.72
HIF3A-215ENST00000533145 ICAM4Q14773 271 aa10.56□□□□□ -0.72
HIF3A-215ENST00000533145 CST9LP1Q5W188 147 aa10.56□□□□□ -0.72
HIF3A-215ENST00000533145 LCN12Q6JVE5 192 aa10.56□□□□□ -0.72
HIF3A-215ENST00000533145 GBGT1Q8N5D6 347 aa10.56□□□□□ -0.72
HIF3A-215ENST00000533145 ZNF256Q9Y2P7 627 aaPredicted RBP10.56□□□□□ -0.72
HIF3A-215ENST00000533145 SELENOKQ9Y6D0 94 aa10.56□□□□□ -0.72
HIF3A-215ENST00000533145 IGKV3-7A0A075B6H7 116 aa10.55□□□□□ -0.72
HIF3A-215ENST00000533145 OR4C46A6NHA9 309 aa10.55□□□□□ -0.72
HIF3A-215ENST00000533145 C11orf94C9JXX5 98 aa10.55□□□□□ -0.72
HIF3A-215ENST00000533145 ATP5G3P48201 142 aa10.55□□□□□ -0.72
HIF3A-215ENST00000533145 CD81P60033 236 aa10.55□□□□□ -0.72
HIF3A-215ENST00000533145 PEA15Q15121 130 aa10.55□□□□□ -0.72
HIF3A-215ENST00000533145 PSG3Q16557 428 aa10.55□□□□□ -0.72
HIF3A-215ENST00000533145 NDUFA5Q16718 116 aa10.55□□□□□ -0.72
HIF3A-215ENST00000533145 BEAN1Q3B7T3 259 aa10.55□□□□□ -0.72
HIF3A-215ENST00000533145 TOR2AQ5JU69 321 aa10.55□□□□□ -0.72
HIF3A-215ENST00000533145 EXOC3-AS1Q8N2X6 119 aa10.55□□□□□ -0.72
HIF3A-215ENST00000533145 C5orf17Q8NAS9 161 aa10.55□□□□□ -0.72
HIF3A-215ENST00000533145 RXFP4Q8TDU9 374 aa10.55□□□□□ -0.72
HIF3A-215ENST00000533145 EIF5A2Q9GZV4 153 aaKnown RBP10.55□□□□□ -0.72
HIF3A-215ENST00000533145 PDE6DO43924 150 aa10.54□□□□□ -0.72
HIF3A-215ENST00000533145 IGLL1P15814 213 aa10.54□□□□□ -0.72
HIF3A-215ENST00000533145 CMC4P56277 68 aaPredicted RBP10.54□□□□□ -0.72
HIF3A-215ENST00000533145 UQCC3Q6UW78 93 aa10.54□□□□□ -0.72
HIF3A-215ENST00000533145 WFDC3Q8IUB2 231 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms