RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 IFITM3Q01628 133 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 NDUFA5Q16718 116 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 IAH1Q2TAA2 248 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 TIGITQ495A1 244 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 SPANXN5Q5MJ07 72 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 SAPCD1Q5SSQ6 148 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 LAMTOR1Q6IAA8 161 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 OR8G2PQ6IF36 304 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 OR1S2Q8NGQ3 325 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 ZNF431Q8TF32 576 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 Q8WTZ3 238 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 URB1-AS1Q96HZ7 61 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 ZNF414Q96IQ9 312 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 SEC22CQ9BRL7 303 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 RHPN1-AS1Q9BWJ2 59 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 KRTAP4-8Q9BYQ9 185 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 TUBA4BQ9H853 241 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 Q9HAA7 133 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 GSKIPQ9P0R6 139 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 SMPXQ9UHP9 88 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 TNFRSF18Q9Y5U5 241 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 DNAH3Q8TD57 4116 aa4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 IGHV3OR16-13A0A075B7E8 117 aa4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 IGHV3-74A0A0B4J1X5 117 aa4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 ZFP92A6NM28 416 aa4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 OR11H12B2RN74 326 aa4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 H3BP45 60 aa4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 SSSCA1O60232 199 aa4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 FABP1P07148 127 aa4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 CD7P09564 240 aa4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 RD3LP0DJH9 198 aa4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 RPL35AP18077 110 aaKnown RBP4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 C4BPBP20851 252 aa4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 NPPCP23582 126 aa4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 YPEL3P61236 119 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 SBSPONQ8IVN8 264 aa4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 MTURNQ8N3F0 131 aa4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 C12orf45Q8N5I9 185 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 PRR26Q8N8Z3 221 aa4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 NARS2Q96I59 477 aaKnown RBP4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 SLC35E1Q96K37 410 aa4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 METTL26Q96S19 204 aa4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 RNF2Q99496 336 aa4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 PSENENQ9NZ42 101 aa4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 C11orf21Q9P2W6 132 aa4.31□□□□□ -1.72
HMGB1P42-201ENST00000532126 PRKDCP78527 4128 aaKnown RBP4.3□□□□□ -1.72
HMGB1P42-201ENST00000532126 IGKV3-7A0A075B6H7 116 aa4.3□□□□□ -1.72
HMGB1P42-201ENST00000532126 IGHV3-66A0A0C4DH42 116 aa4.3□□□□□ -1.72
HMGB1P42-201ENST00000532126 A0A1B0GW15 77 aa4.3□□□□□ -1.72
HMGB1P42-201ENST00000532126 A0A1W2PS18 150 aa4.3□□□□□ -1.72
HMGB1P42-201ENST00000532126 OR4C46A6NHA9 309 aa4.3□□□□□ -1.72
HMGB1P42-201ENST00000532126 PFDN1O60925 122 aa4.3□□□□□ -1.72
HMGB1P42-201ENST00000532126 TOMM40O96008 361 aa4.3□□□□□ -1.72
HMGB1P42-201ENST00000532126 IL4P05112 153 aa4.3□□□□□ -1.72
HMGB1P42-201ENST00000532126 IL5P05113 134 aa4.3□□□□□ -1.72
HMGB1P42-201ENST00000532126 CD5P06127 495 aa4.3□□□□□ -1.72
HMGB1P42-201ENST00000532126 PAFAH1B2P68402 229 aa4.3□□□□□ -1.72
HMGB1P42-201ENST00000532126 ARL16Q0P5N6 197 aa4.3□□□□□ -1.72
HMGB1P42-201ENST00000532126 GSG1LQ6UXU4 331 aa4.3□□□□□ -1.72
HMGB1P42-201ENST00000532126 DEFB125Q8N687 156 aa4.3□□□□□ -1.72
HMGB1P42-201ENST00000532126 SMIM8Q96KF7 97 aa4.3□□□□□ -1.72
HMGB1P42-201ENST00000532126 ATP5SQ99766 215 aa4.3□□□□□ -1.72
HMGB1P42-201ENST00000532126 MAP1LC3CQ9BXW4 147 aa4.3□□□□□ -1.72
HMGB1P42-201ENST00000532126 VSIRQ9H7M9 311 aa4.3□□□□□ -1.72
HMGB1P42-201ENST00000532126 IGKV1D-37A0A075B6S9 117 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 IGLV9-49A0A0B4J1Y8 123 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 TRBV7-9A0A0J9YWB2 115 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 SNRPGP15A8MWD9 76 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 INMT-MINDY4F8WBC2 141 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 PAX4O43316 350 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 METTL15P1P0C7V9 234 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 PSG1P11464 419 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 CRYBB3P26998 211 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 TFPI2P48307 235 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 EIF2B2P49770 351 aaKnown RBP4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 PAX9P55771 341 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 CMC4P56277 68 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 TAS2R30P59541 319 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 UBE2G2P60604 165 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 ZNF90Q03938 601 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 AKR1C1Q04828 323 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 C5orf47Q569G3 176 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 TCF24Q7RTU0 167 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 NEXN-AS1Q8NBZ9 246 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 OR10P1Q8NGE3 313 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 OR51G1Q8NGK1 321 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 ISOC2Q96AB3 205 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 C2orf50Q96LR7 162 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 PBDC1Q9BVG4 233 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 WFDC10AQ9H1F0 79 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 CLEC5AQ9NY25 188 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 RABAC1Q9UI14 185 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 NAGKQ9UJ70 344 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 RCL1Q9Y2P8 373 aaKnown RBP4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 LSM5Q9Y4Y9 91 aaKnown RBP4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 URGCP-MRPS24S4R325 110 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 U3KQK5 164 aa4.29□□□□□ -1.72
HMGB1P42-201ENST00000532126 IGLV5-37A0A075B6J1 123 aa4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 IGLV5-45A0A087WSX0 123 aa4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 C7orf66A4D0T2 115 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms