RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	IGKV1-12	A0A0C4DH73	117 aa		3.78	□□□□□ -1.8
ECHDC1-222	ENST00000531967	FAM236A	A0A1B0GUQ0	79 aa		3.78	□□□□□ -1.8
ECHDC1-222	ENST00000531967	FAM236B	A0A1B0GV22	79 aa		3.78	□□□□□ -1.8
ECHDC1-222	ENST00000531967	ZNF860	A6NHJ4	632 aa		3.78	□□□□□ -1.8
ECHDC1-222	ENST00000531967	IGKV1D-12	P01611	117 aa		3.78	□□□□□ -1.8
ECHDC1-222	ENST00000531967	MT-ATP8	P03928	68 aa		3.78	□□□□□ -1.8
ECHDC1-222	ENST00000531967	LINC00032	P0C843	101 aa		3.78	□□□□□ -1.8
ECHDC1-222	ENST00000531967	FABP2	P12104	132 aa		3.78	□□□□□ -1.8
ECHDC1-222	ENST00000531967	SLC25A6	P12236	298 aa		3.78	□□□□□ -1.8
ECHDC1-222	ENST00000531967	TPT1	P13693	172 aa	Known RBP	3.78	□□□□□ -1.8
ECHDC1-222	ENST00000531967	CRYBB3	P26998	211 aa		3.78	□□□□□ -1.8
ECHDC1-222	ENST00000531967	PSMB8	P28062	276 aa		3.78	□□□□□ -1.8
ECHDC1-222	ENST00000531967	FOXA3	P55318	350 aa	Predicted RBP	3.78	□□□□□ -1.8
ECHDC1-222	ENST00000531967	DIAPH2-AS1	Q14236	149 aa		3.78	□□□□□ -1.8
ECHDC1-222	ENST00000531967	TWIST1	Q15672	202 aa		3.78	□□□□□ -1.8
ECHDC1-222	ENST00000531967	C2orf15	Q8WU43	125 aa	Known RBP	3.78	□□□□□ -1.8
ECHDC1-222	ENST00000531967	CHAC1	Q9BUX1	264 aa		3.78	□□□□□ -1.8
ECHDC1-222	ENST00000531967	KIF26A	Q9ULI4	1882 aa	Predicted RBP	3.78	□□□□□ -1.8
ECHDC1-222	ENST00000531967	WDR90	Q96KV7	1748 aa		3.78	□□□□□ -1.8
ECHDC1-222	ENST00000531967	PLXNA3	P51805	1871 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	NYNRIN	Q9P2P1	1898 aa	Known RBP	3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	TRBV24-1	A0A075B6N3	115 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967		A0A087X002	238 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	IGHV1-58	A0A0C4DH39	117 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	IGKV1-6	A0A0C4DH72	117 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	UMAD1	C9J7I0	102 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967		C9JCJ5	164 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	CST7	O76096	145 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	LY6G6D	O95868	133 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	NAPSA	O96009	420 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	ZNF20	P17024	532 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	FGF12	P61328	243 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	SNRPG	P62308	76 aa	Known RBP	3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	BSPH1	Q075Z2	132 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	KLF9	Q13886	244 aa	Predicted RBP	3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	HES1	Q14469	280 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	LCN15	Q6UWW0	184 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	STAG3L4	Q8TBR4	150 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	RNASE6	Q93091	150 aa	Known RBP	3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	MAL2	Q969L2	176 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	CAMK2N2	Q96S95	79 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	HDHD3	Q9BSH5	251 aa	Predicted RBP	3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	ST20	Q9HBF5	79 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	ZNF286A	Q9HBT8	521 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	NOP16	Q9Y3C1	178 aa	Known RBP	3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	CREBL2	O60519	120 aa	Predicted RBP	3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	CD7	P09564	240 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	LGALS3	P17931	250 aa	Known RBP	3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	ELK1	P19419	428 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	CRYGS	P22914	178 aa		3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	ZFP62	Q8NB50	900 aa	Predicted RBP	3.77	□□□□□ -1.81
ECHDC1-222	ENST00000531967	DENND4C	Q5VZ89	1909 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	IGHV3-72	A0A0B4J1Y9	119 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	KLF7	O75840	302 aa	Predicted RBP	3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	TNF	P01375	233 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	IGHV3-11	P01762	117 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	IL5	P05113	134 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	CXCL8	P10145	99 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	ATP5G2	Q06055	141 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	BVES-AS1	Q5T3Y7	98 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	TMEM91	Q6ZNR0	172 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	SSX8	Q7RTT4	187 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	OR4K13	Q8NH42	304 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	TBL1Y	Q9BQ87	522 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	SMDT1	Q9H4I9	107 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	PIKFYVE	Q9Y2I7	2098 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	PLXNB2	O15031	1838 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	DSPP	Q9NZW4	1301 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967		F8W1H4	67 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	INS-IGF2	F8WCM5	200 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	SOCS3	O14543	225 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	PLGLB1	Q02325	96 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	FHL2	Q14192	279 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	ZNF880	Q6PDB4	577 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	TRAPPC6B	Q86SZ2	158 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	SMIM29	Q86T20	159 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	TMEM242	Q9NWH2	141 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	CSAG2	Q9Y5P2	127 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	TICRR	Q7Z2Z1	1910 aa		3.76	□□□□□ -1.81
ECHDC1-222	ENST00000531967	DSCAML1	Q8TD84	2053 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	IGHV1OR15-9	A0A0B4J2B8	117 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	ZNF727	A8MUV8	499 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967		H3BRM9	83 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	SERF1A	O75920	110 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	SLC25A4	P12235	298 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	SEC11A	P67812	179 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	CCL20	P78556	96 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	C11orf87	Q6NUJ2	197 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	DPPA3	Q6W0C5	159 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	ZNF329	Q86UD4	541 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	RPS19BP1	Q86WX3	136 aa	Known RBP	3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	ORMDL3	Q8N138	153 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	VSTM2A	Q8TAG5	236 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	TMEM158	Q8WZ71	300 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	S100A16	Q96FQ6	103 aa	Known RBP	3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	TRAV27	A0A087WT01	109 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967		A0A0D9SEW6	157 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	NAP1L6	A6NFF2	107 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967		H3BMG7	143 aa		3.75	□□□□□ -1.81
ECHDC1-222	ENST00000531967	BUB1B-PAK6	H3BSN5	160 aa		3.75	□□□□□ -1.81

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