RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 DNAH9Q9NYC9 4486 aa8.24□□□□□ -1.09
CAPN1-221ENST00000531068 COL7A1Q02388 2944 aa8.24□□□□□ -1.09
CAPN1-221ENST00000531068 IGKV1D-37A0A075B6S9 117 aa8.23□□□□□ -1.09
CAPN1-221ENST00000531068 PDE6DO43924 150 aa8.23□□□□□ -1.09
CAPN1-221ENST00000531068 SCGB2A1O75556 95 aa8.23□□□□□ -1.09
CAPN1-221ENST00000531068 BMI1P35226 326 aa8.23□□□□□ -1.09
CAPN1-221ENST00000531068 CMC4P56277 68 aaPredicted RBP8.23□□□□□ -1.09
CAPN1-221ENST00000531068 CYP2G1PQ6ZSU1 146 aa8.23□□□□□ -1.09
CAPN1-221ENST00000531068 TMEM144Q7Z5S9 345 aa8.23□□□□□ -1.09
CAPN1-221ENST00000531068 THAP8Q8NA92 274 aa8.23□□□□□ -1.09
CAPN1-221ENST00000531068 TMEM116Q8NCL8 245 aa8.23□□□□□ -1.09
CAPN1-221ENST00000531068 ZNF414Q96IQ9 312 aa8.23□□□□□ -1.09
CAPN1-221ENST00000531068 SMPXQ9UHP9 88 aa8.23□□□□□ -1.09
CAPN1-221ENST00000531068 TENM3Q9P273 2699 aa8.22□□□□□ -1.09
CAPN1-221ENST00000531068 OR4C46A6NHA9 309 aa8.22□□□□□ -1.09
CAPN1-221ENST00000531068 CDC34P49427 236 aaPredicted RBP8.22□□□□□ -1.09
CAPN1-221ENST00000531068 TEPPQ6URK8 271 aa8.22□□□□□ -1.09
CAPN1-221ENST00000531068 SSX7Q7RTT5 188 aa8.22□□□□□ -1.09
CAPN1-221ENST00000531068 SLC35E1Q96K37 410 aa8.22□□□□□ -1.09
CAPN1-221ENST00000531068 MGST2Q99735 147 aa8.22□□□□□ -1.09
CAPN1-221ENST00000531068 NAT8Q9UHE5 227 aa8.22□□□□□ -1.09
CAPN1-221ENST00000531068 SLC45A2Q9UMX9 530 aa8.22□□□□□ -1.09
CAPN1-221ENST00000531068 SELENOKQ9Y6D0 94 aa8.22□□□□□ -1.09
CAPN1-221ENST00000531068 TRBV24-1A0A075B6N3 115 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 LOC102724200A0A096LPH7 203 aaPredicted RBP8.21□□□□□ -1.1
CAPN1-221ENST00000531068 IGHV7-4-1A0A0J9YVY3 117 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 A0A1B0GV50 99 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 A0A1W2PPV4 95 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 RBMY1BA6NDE4 496 aaKnown RBP8.21□□□□□ -1.1
CAPN1-221ENST00000531068 RBMY1EA6NEQ0 496 aaKnown RBP8.21□□□□□ -1.1
CAPN1-221ENST00000531068 ZFP92A6NM28 416 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 F6UZH7 168 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 ZNF207O43670 478 aaKnown RBP8.21□□□□□ -1.1
CAPN1-221ENST00000531068 CLN5O75503 358 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 CXorf1O96002 111 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 IGHV3-48P01763 117 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 RBMY1DP0C7P1 496 aaKnown RBP8.21□□□□□ -1.1
CAPN1-221ENST00000531068 LINC00869P0C866 280 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 STAG3L2P0CL84 134 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 STAG3L3P0CL85 134 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 PRR20EP86478 221 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 PRR20CP86479 221 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 PRR20DP86480 221 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 PRR20BP86481 221 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 PRR20AP86496 221 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 TMEM241Q24JQ0 296 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 ZNF600Q6ZNG1 722 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 IL17DQ8TAD2 202 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 BTF3L4Q96K17 158 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 RNF2Q99496 336 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 FAM110AQ9BQ89 295 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 RHPN1-AS1Q9BWJ2 59 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 GGTLC1Q9BX51 225 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 DOK5Q9P104 306 aa8.21□□□□□ -1.1
CAPN1-221ENST00000531068 IGHV3OR16-8A0A075B7F1 116 aa8.2□□□□□ -1.1
CAPN1-221ENST00000531068 TRAV30A0A087WSZ9 112 aa8.2□□□□□ -1.1
CAPN1-221ENST00000531068 C5orf52A6NGY3 159 aa8.2□□□□□ -1.1
CAPN1-221ENST00000531068 ZNF727A8MUV8 499 aa8.2□□□□□ -1.1
CAPN1-221ENST00000531068 CHEK1O14757 476 aa8.2□□□□□ -1.1
CAPN1-221ENST00000531068 RHOBP62745 196 aa8.2□□□□□ -1.1
CAPN1-221ENST00000531068 PAFAH1B2P68402 229 aa8.2□□□□□ -1.1
CAPN1-221ENST00000531068 CASC10Q5T4H9 136 aa8.2□□□□□ -1.1
CAPN1-221ENST00000531068 FAM24BQ8N5W8 94 aa8.2□□□□□ -1.1
CAPN1-221ENST00000531068 OR4X1Q8NH49 305 aa8.2□□□□□ -1.1
CAPN1-221ENST00000531068 ANAPC16Q96DE5 110 aa8.2□□□□□ -1.1
CAPN1-221ENST00000531068 PYGO2Q9BRQ0 406 aa8.2□□□□□ -1.1
CAPN1-221ENST00000531068 WFDC10AQ9H1F0 79 aa8.2□□□□□ -1.1
CAPN1-221ENST00000531068 EDA2RQ9HAV5 297 aa8.2□□□□□ -1.1
CAPN1-221ENST00000531068 PXMP4Q9Y6I8 212 aa8.2□□□□□ -1.1
CAPN1-221ENST00000531068 UBE2CO00762 179 aa8.19□□□□□ -1.1
CAPN1-221ENST00000531068 IGKV1-17P01599 117 aa8.19□□□□□ -1.1
CAPN1-221ENST00000531068 S100A8P05109 93 aa8.19□□□□□ -1.1
CAPN1-221ENST00000531068 NPPCP23582 126 aa8.19□□□□□ -1.1
CAPN1-221ENST00000531068 APOC4P55056 127 aa8.19□□□□□ -1.1
CAPN1-221ENST00000531068 FGF8P55075 233 aaPredicted RBP8.19□□□□□ -1.1
CAPN1-221ENST00000531068 ELOBQ15370 118 aa8.19□□□□□ -1.1
CAPN1-221ENST00000531068 ETFRF1Q6IPR1 90 aa8.19□□□□□ -1.1
CAPN1-221ENST00000531068 TOMM20LQ6UXN7 152 aa8.19□□□□□ -1.1
CAPN1-221ENST00000531068 LINC00518Q8N0U6 118 aa8.19□□□□□ -1.1
CAPN1-221ENST00000531068 NPIPB3Q92617 1050 aa8.19□□□□□ -1.1
CAPN1-221ENST00000531068 IMMP2LQ96T52 175 aa8.19□□□□□ -1.1
CAPN1-221ENST00000531068 TRGV9Q99603 122 aa8.19□□□□□ -1.1
CAPN1-221ENST00000531068 TCEAL7Q9BRU2 100 aa8.19□□□□□ -1.1
CAPN1-221ENST00000531068 LY96Q9Y6Y9 160 aa8.19□□□□□ -1.1
CAPN1-221ENST00000531068 A0A1W2PS18 150 aa8.18□□□□□ -1.1
CAPN1-221ENST00000531068 PPP1R2P9O14990 202 aa8.18□□□□□ -1.1
CAPN1-221ENST00000531068 IGLC1P0CG04 106 aa8.18□□□□□ -1.1
CAPN1-221ENST00000531068 B2MP61769 119 aa8.18□□□□□ -1.1
CAPN1-221ENST00000531068 SMIM7Q9BQ49 75 aa8.18□□□□□ -1.1
CAPN1-221ENST00000531068 SLC25A22Q9H936 323 aa8.18□□□□□ -1.1
CAPN1-221ENST00000531068 IGHV3-49A0A0A0MS15 119 aa8.17□□□□□ -1.1
CAPN1-221ENST00000531068 KIR2DL5BA0A0G2JN68 375 aa8.17□□□□□ -1.1
CAPN1-221ENST00000531068 KIR2DL5BA0A0G2JPC4 375 aa8.17□□□□□ -1.1
CAPN1-221ENST00000531068 S100A6P06703 90 aa8.17□□□□□ -1.1
CAPN1-221ENST00000531068 OR10J1P30954 320 aa8.17□□□□□ -1.1
CAPN1-221ENST00000531068 AKR1C3P42330 323 aa8.17□□□□□ -1.1
CAPN1-221ENST00000531068 MIC13Q5XKP0 118 aa8.17□□□□□ -1.1
CAPN1-221ENST00000531068 PQLC2Q6ZP29 291 aa8.17□□□□□ -1.1
CAPN1-221ENST00000531068 KIR2DL5AQ8N109 375 aa8.17□□□□□ -1.1
CAPN1-221ENST00000531068 KIR2DL5BQ8NHK3 375 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms