RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 PAX4O43316 350 aa6.84□□□□□ -1.31
CTNND1-227ENST00000530748 TEX36Q5VZQ5 186 aa6.84□□□□□ -1.31
CTNND1-227ENST00000530748 TIMM21Q9BVV7 248 aa6.84□□□□□ -1.31
CTNND1-227ENST00000530748 RLFQ13129 1914 aa6.84□□□□□ -1.31
CTNND1-227ENST00000530748 OVOL3O00110 214 aa6.84□□□□□ -1.32
CTNND1-227ENST00000530748 C17orf58Q2M2W7 97 aa6.84□□□□□ -1.32
CTNND1-227ENST00000530748 C1orf194Q5T5A4 169 aa6.84□□□□□ -1.32
CTNND1-227ENST00000530748 ZNF562Q6V9R5 426 aa6.84□□□□□ -1.32
CTNND1-227ENST00000530748 APC2O95996 2303 aa6.84□□□□□ -1.32
CTNND1-227ENST00000530748 PLXNA2O75051 1894 aa6.84□□□□□ -1.32
CTNND1-227ENST00000530748 SMKR1H3BMG3 65 aa6.83□□□□□ -1.32
CTNND1-227ENST00000530748 LY6HO94772 140 aa6.83□□□□□ -1.32
CTNND1-227ENST00000530748 DEFB104AQ8WTQ1 72 aa6.83□□□□□ -1.32
CTNND1-227ENST00000530748 TMEM141Q96I45 108 aa6.83□□□□□ -1.32
CTNND1-227ENST00000530748 SPAG8Q99932 426 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-227ENST00000530748 hDV102S1A0JD36 115 aa6.83□□□□□ -1.32
CTNND1-227ENST00000530748 PRSS46E5RG02 174 aa6.83□□□□□ -1.32
CTNND1-227ENST00000530748 SYS1-DBNDD2H3BUS1 97 aa6.83□□□□□ -1.32
CTNND1-227ENST00000530748 MEGF9Q9H1U4 602 aa6.83□□□□□ -1.32
CTNND1-227ENST00000530748 PLXNA4Q9HCM2 1894 aa6.83□□□□□ -1.32
CTNND1-227ENST00000530748 MRPL52Q86TS9 123 aaKnown RBP6.83□□□□□ -1.32
CTNND1-227ENST00000530748 MCRIP2Q9BUT9 160 aaKnown RBP6.83□□□□□ -1.32
CTNND1-227ENST00000530748 SCN2AQ99250 2005 aa6.83□□□□□ -1.32
CTNND1-227ENST00000530748 CFHR2P36980 270 aa6.83□□□□□ -1.32
CTNND1-227ENST00000530748 BCL6BQ8N143 479 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-227ENST00000530748 SIGMAR1Q99720 223 aa6.83□□□□□ -1.32
CTNND1-227ENST00000530748 ANAPC13Q9BS18 74 aa6.83□□□□□ -1.32
CTNND1-227ENST00000530748 PROK2Q9HC23 129 aa6.83□□□□□ -1.32
CTNND1-227ENST00000530748 DOCK3Q8IZD9 2030 aa6.83□□□□□ -1.32
CTNND1-227ENST00000530748 RIPPLY3P57055 190 aa6.83□□□□□ -1.32
CTNND1-227ENST00000530748 NUP214P35658 2090 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-227ENST00000530748 IGKV1-6A0A0C4DH72 117 aa6.82□□□□□ -1.32
CTNND1-227ENST00000530748 DEFB131AP59861 70 aa6.82□□□□□ -1.32
CTNND1-227ENST00000530748 MLANAQ16655 118 aa6.82□□□□□ -1.32
CTNND1-227ENST00000530748 AMN1Q8IY45 258 aa6.82□□□□□ -1.32
CTNND1-227ENST00000530748 HS3ST6Q96QI5 342 aa6.82□□□□□ -1.32
CTNND1-227ENST00000530748 ZNRD1Q9P1U0 126 aa6.82□□□□□ -1.32
CTNND1-227ENST00000530748 H3BRN7 92 aa6.82□□□□□ -1.32
CTNND1-227ENST00000530748 TNFRSF6BO95407 300 aa6.82□□□□□ -1.32
CTNND1-227ENST00000530748 PFN1P07737 140 aaKnown RBP6.82□□□□□ -1.32
CTNND1-227ENST00000530748 Q6ZRM9 215 aa6.82□□□□□ -1.32
CTNND1-227ENST00000530748 ZNF124Q15973 351 aa6.82□□□□□ -1.32
CTNND1-227ENST00000530748 GAGE2EQ4V326 116 aa6.82□□□□□ -1.32
CTNND1-227ENST00000530748 C6orf226Q5I0X4 101 aa6.82□□□□□ -1.32
CTNND1-227ENST00000530748 PLA2G2CQ5R387 149 aa6.82□□□□□ -1.32
CTNND1-227ENST00000530748 GAGE2DQ9UEU5 116 aa6.82□□□□□ -1.32
CTNND1-227ENST00000530748 LINC00311Q8N616 119 aa6.82□□□□□ -1.32
CTNND1-227ENST00000530748 LAMTOR3Q9UHA4 124 aa6.82□□□□□ -1.32
CTNND1-227ENST00000530748 KIAA1671Q9BY89 1806 aa6.82□□□□□ -1.32
CTNND1-227ENST00000530748 CNTRLQ7Z7A1 2325 aa6.82□□□□□ -1.32
CTNND1-227ENST00000530748 TRAV8-1A0A0A6YYK1 113 aa6.82□□□□□ -1.32
CTNND1-227ENST00000530748 C3orf79P0CE67 100 aa6.82□□□□□ -1.32
CTNND1-227ENST00000530748 LY6G5BQ8NDX9 201 aa6.82□□□□□ -1.32
CTNND1-227ENST00000530748 THADAQ6YHU6 1953 aa6.81□□□□□ -1.32
CTNND1-227ENST00000530748 I3L3M4 83 aa6.81□□□□□ -1.32
CTNND1-227ENST00000530748 NDUFA4O00483 81 aa6.81□□□□□ -1.32
CTNND1-227ENST00000530748 DKK1O94907 266 aa6.81□□□□□ -1.32
CTNND1-227ENST00000530748 C1orf159Q96HA4 380 aa6.81□□□□□ -1.32
CTNND1-227ENST00000530748 ESDP10768 282 aa6.81□□□□□ -1.32
CTNND1-227ENST00000530748 CITED2Q99967 270 aaPredicted RBP6.81□□□□□ -1.32
CTNND1-227ENST00000530748 DOCK6Q96HP0 2047 aa6.81□□□□□ -1.32
CTNND1-227ENST00000530748 RPL32P62910 135 aaKnown RBP6.81□□□□□ -1.32
CTNND1-227ENST00000530748 WDR86Q86TI4 376 aa6.81□□□□□ -1.32
CTNND1-227ENST00000530748 TMEM256Q8N2U0 113 aa6.81□□□□□ -1.32
CTNND1-227ENST00000530748 LIME1Q9H400 295 aa6.81□□□□□ -1.32
CTNND1-227ENST00000530748 TMEM14CQ9P0S9 112 aa6.81□□□□□ -1.32
CTNND1-227ENST00000530748 KIAA0100Q14667 2235 aaKnown RBP6.81□□□□□ -1.32
CTNND1-227ENST00000530748 CT83Q5H943 113 aa6.81□□□□□ -1.32
CTNND1-227ENST00000530748 Q6ZR03 302 aa6.81□□□□□ -1.32
CTNND1-227ENST00000530748 Q8N8P6 123 aa6.81□□□□□ -1.32
CTNND1-227ENST00000530748 NLRC5Q86WI3 1866 aa6.81□□□□□ -1.32
CTNND1-227ENST00000530748 TRBV19A0A075B6N1 114 aa6.8□□□□□ -1.32
CTNND1-227ENST00000530748 ARMS2P0C7Q2 107 aa6.8□□□□□ -1.32
CTNND1-227ENST00000530748 TRAV13-1A0A0B4J241 112 aa6.8□□□□□ -1.32
CTNND1-227ENST00000530748 DLX4Q92988 240 aaPredicted RBP6.8□□□□□ -1.32
CTNND1-227ENST00000530748 CHAC1Q9BUX1 264 aa6.8□□□□□ -1.32
CTNND1-227ENST00000530748 MYLKQ15746 1914 aa6.8□□□□□ -1.32
CTNND1-227ENST00000530748 FAM231BA6NCW3 169 aa6.8□□□□□ -1.32
CTNND1-227ENST00000530748 RHODO00212 210 aa6.8□□□□□ -1.32
CTNND1-227ENST00000530748 IGLV1-44P01699 117 aa6.8□□□□□ -1.32
CTNND1-227ENST00000530748 AZU1P20160 251 aa6.8□□□□□ -1.32
CTNND1-227ENST00000530748 APOC4P55056 127 aa6.8□□□□□ -1.32
CTNND1-227ENST00000530748 ARTNQ5T4W7 220 aa6.8□□□□□ -1.32
CTNND1-227ENST00000530748 C2orf82Q6UX34 121 aa6.8□□□□□ -1.32
CTNND1-227ENST00000530748 RMI2Q96E14 147 aa6.8□□□□□ -1.32
CTNND1-227ENST00000530748 SPXQ9BT56 116 aa6.8□□□□□ -1.32
CTNND1-227ENST00000530748 TRBV25-1A0A075B6N4 114 aa6.8□□□□□ -1.32
CTNND1-227ENST00000530748 KLK9Q9UKQ9 250 aa6.8□□□□□ -1.32
CTNND1-227ENST00000530748 A0A087X0K7 114 aa6.8□□□□□ -1.32
CTNND1-227ENST00000530748 DAD1P61803 113 aa6.8□□□□□ -1.32
CTNND1-227ENST00000530748 Q0VG73 95 aa6.8□□□□□ -1.32
CTNND1-227ENST00000530748 KLF12Q9Y4X4 402 aa6.8□□□□□ -1.32
CTNND1-227ENST00000530748 CKAP5Q14008 2032 aa6.79□□□□□ -1.32
CTNND1-227ENST00000530748 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-227ENST00000530748 DEFB130BP0DP73 79 aa6.79□□□□□ -1.32
CTNND1-227ENST00000530748 DEFB130AP0DP74 79 aa6.79□□□□□ -1.32
CTNND1-227ENST00000530748 LOXP28300 417 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-227ENST00000530748 C8orf86Q6ZUL3 223 aa6.79□□□□□ -1.32
CTNND1-227ENST00000530748 TP53TG1Q9Y2A0 90 aa6.79□□□□□ -1.32
CTNND1-227ENST00000530748 NINQ8N4C6 2090 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 341.6 ms