RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 FABP5P3A8MUU1 101 aa11.25□□□□□ -0.61
PCF11-204ENST00000530660 PRCDQ00LT1 54 aa11.25□□□□□ -0.61
PCF11-204ENST00000530660 IGKV3D-15A0A087WSY6 115 aa11.25□□□□□ -0.61
PCF11-204ENST00000530660 KLF17Q5JT82 389 aaPredicted RBP11.25□□□□□ -0.61
PCF11-204ENST00000530660 ZFP2Q6ZN57 461 aa11.25□□□□□ -0.61
PCF11-204ENST00000530660 Q86TA4 180 aa11.25□□□□□ -0.61
PCF11-204ENST00000530660 C1orf210Q8IVY1 113 aa11.25□□□□□ -0.61
PCF11-204ENST00000530660 Q9H3A6 140 aa11.25□□□□□ -0.61
PCF11-204ENST00000530660 MRPL36Q9P0J6 103 aaKnown RBP11.25□□□□□ -0.61
PCF11-204ENST00000530660 LY6G6EA0A0G2JKS1 128 aa11.25□□□□□ -0.61
PCF11-204ENST00000530660 ABHD17BQ5VST6 288 aa11.25□□□□□ -0.61
PCF11-204ENST00000530660 RND1Q92730 232 aa11.25□□□□□ -0.61
PCF11-204ENST00000530660 U3KQA8 63 aa11.25□□□□□ -0.61
PCF11-204ENST00000530660 LOC107984156A0A0G2JMH3 177 aa11.24□□□□□ -0.61
PCF11-204ENST00000530660 NPYP01303 97 aa11.24□□□□□ -0.61
PCF11-204ENST00000530660 IGKCP01834 107 aa11.24□□□□□ -0.61
PCF11-204ENST00000530660 NDUFV3P56181 108 aaKnown RBP11.24□□□□□ -0.61
PCF11-204ENST00000530660 Q0VFX4 171 aa11.24□□□□□ -0.61
PCF11-204ENST00000530660 ARL17AQ8IVW1 177 aa11.24□□□□□ -0.61
PCF11-204ENST00000530660 RBMXL3Q8N7X1 1067 aaKnown RBP11.24□□□□□ -0.61
PCF11-204ENST00000530660 TMEM160Q9NX00 188 aa11.24□□□□□ -0.61
PCF11-204ENST00000530660 MEOX1P50221 254 aa11.24□□□□□ -0.61
PCF11-204ENST00000530660 C2orf83Q53S99 150 aa11.24□□□□□ -0.61
PCF11-204ENST00000530660 GOLT1AQ6ZVE7 132 aa11.24□□□□□ -0.61
PCF11-204ENST00000530660 ORMDL3Q8N138 153 aa11.24□□□□□ -0.61
PCF11-204ENST00000530660 OR1L4Q8NGR5 311 aa11.24□□□□□ -0.61
PCF11-204ENST00000530660 C12orf49Q9H741 205 aa11.24□□□□□ -0.61
PCF11-204ENST00000530660 OBP2BQ9NPH6 170 aa11.24□□□□□ -0.61
PCF11-204ENST00000530660 A0A087WX48 190 aa11.24□□□□□ -0.61
PCF11-204ENST00000530660 IGKV1-16P04430 117 aa11.24□□□□□ -0.61
PCF11-204ENST00000530660 CCL4P13236 92 aa11.24□□□□□ -0.61
PCF11-204ENST00000530660 MDP1Q86V88 176 aa11.24□□□□□ -0.61
PCF11-204ENST00000530660 PPDPFLQ8WWR9 84 aa11.24□□□□□ -0.61
PCF11-204ENST00000530660 SPINK14Q6IE38 97 aa11.23□□□□□ -0.61
PCF11-204ENST00000530660 PIFOQ8TCI5 191 aa11.23□□□□□ -0.61
PCF11-204ENST00000530660 DLX4Q92988 240 aaPredicted RBP11.23□□□□□ -0.61
PCF11-204ENST00000530660 RITA1Q96K30 269 aa11.23□□□□□ -0.61
PCF11-204ENST00000530660 CITED1Q99966 193 aa11.23□□□□□ -0.61
PCF11-204ENST00000530660 TMEM8BA6NDV4 472 aa11.23□□□□□ -0.61
PCF11-204ENST00000530660 SAA2P0DJI9 122 aaPredicted RBP11.23□□□□□ -0.61
PCF11-204ENST00000530660 SRSF1Q07955 248 aaKnown RBP eCLIP11.23□□□□□ -0.616e-9■■■□□ 15.3
PCF11-204ENST00000530660 C11orf53Q8IXP5 236 aa11.23□□□□□ -0.61
PCF11-204ENST00000530660 FOXC2Q99958 501 aa11.23□□□□□ -0.61
PCF11-204ENST00000530660 PPDPFQ9H3Y8 114 aa11.23□□□□□ -0.61
PCF11-204ENST00000530660 IGKV1D-37A0A075B6S9 117 aa11.22□□□□□ -0.61
PCF11-204ENST00000530660 TRAV40A0A0B4J280 105 aa11.22□□□□□ -0.61
PCF11-204ENST00000530660 TGFAP01135 160 aa11.22□□□□□ -0.61
PCF11-204ENST00000530660 MPV17P39210 176 aa11.22□□□□□ -0.61
PCF11-204ENST00000530660 LOXL3P58215 753 aa11.22□□□□□ -0.61
PCF11-204ENST00000530660 MRPL51Q4U2R6 128 aaKnown RBP11.22□□□□□ -0.61
PCF11-204ENST00000530660 EXOC3-AS1Q8N2X6 119 aa11.22□□□□□ -0.61
PCF11-204ENST00000530660 C3orf56Q8N813 242 aa11.22□□□□□ -0.61
PCF11-204ENST00000530660 ZMAT4Q9H898 229 aa11.22□□□□□ -0.61
PCF11-204ENST00000530660 YAE1D1Q9NRH1 226 aa11.22□□□□□ -0.61
PCF11-204ENST00000530660 E7EUB6 86 aa11.22□□□□□ -0.61
PCF11-204ENST00000530660 RUSC1-AS1Q66K80 236 aa11.22□□□□□ -0.61
PCF11-204ENST00000530660 ICE1Q9Y2F5 2266 aa11.22□□□□□ -0.61
PCF11-204ENST00000530660 TRAV4A0A0B4J268 109 aa11.22□□□□□ -0.61
PCF11-204ENST00000530660 IGLV2-11P01706 119 aa11.22□□□□□ -0.61
PCF11-204ENST00000530660 ATP5J2P56134 94 aa11.22□□□□□ -0.61
PCF11-204ENST00000530660 CD177Q8N6Q3 437 aa11.22□□□□□ -0.61
PCF11-204ENST00000530660 ZGRF1Q86YA3 2104 aa11.21□□□□□ -0.61
PCF11-204ENST00000530660 RHODO00212 210 aa11.21□□□□□ -0.61
PCF11-204ENST00000530660 CRLF1O75462 422 aa11.21□□□□□ -0.61
PCF11-204ENST00000530660 FAM104BQ5XKR9 115 aa11.21□□□□□ -0.61
PCF11-204ENST00000530660 TEN1Q86WV5 123 aa11.21□□□□□ -0.61
PCF11-204ENST00000530660 RAX2Q96IS3 184 aa11.21□□□□□ -0.61
PCF11-204ENST00000530660 DMDP11532 3685 aa11.21□□□□□ -0.61
PCF11-204ENST00000530660 H3BVH4 76 aa11.21□□□□□ -0.62
PCF11-204ENST00000530660 LEPP41159 167 aa11.21□□□□□ -0.62
PCF11-204ENST00000530660 FAM159AQ6UWV7 190 aa11.21□□□□□ -0.62
PCF11-204ENST00000530660 UPK2O00526 184 aa11.2□□□□□ -0.62
PCF11-204ENST00000530660 HOXA3O43365 443 aaPredicted RBP11.2□□□□□ -0.62
PCF11-204ENST00000530660 GAS8-AS1O95177 125 aa11.2□□□□□ -0.62
PCF11-204ENST00000530660 ZNF688P0C7X2 276 aa11.2□□□□□ -0.62
PCF11-204ENST00000530660 CKS2P33552 79 aa11.2□□□□□ -0.62
PCF11-204ENST00000530660 KIR2DS2P43631 304 aa11.2□□□□□ -0.62
PCF11-204ENST00000530660 GAGE2BQ13066 116 aa11.2□□□□□ -0.62
PCF11-204ENST00000530660 GAGE2EQ4V326 116 aa11.2□□□□□ -0.62
PCF11-204ENST00000530660 LYZL1Q6UWQ5 148 aa11.2□□□□□ -0.62
PCF11-204ENST00000530660 GAGE2DQ9UEU5 116 aa11.2□□□□□ -0.62
PCF11-204ENST00000530660 IL4P05112 153 aa11.2□□□□□ -0.62
PCF11-204ENST00000530660 EVI2AP22794 236 aa11.2□□□□□ -0.62
PCF11-204ENST00000530660 FOLR3P41439 243 aa11.2□□□□□ -0.62
PCF11-204ENST00000530660 OR1L8Q8NGR8 309 aa11.2□□□□□ -0.62
PCF11-204ENST00000530660 HES7Q9BYE0 225 aa11.2□□□□□ -0.62
PCF11-204ENST00000530660 MRPS17Q9Y2R5 130 aaKnown RBP11.2□□□□□ -0.62
PCF11-204ENST00000530660 TRBV7-3A0A075B6L6 115 aa11.2□□□□□ -0.62
PCF11-204ENST00000530660 J3KRW8 73 aa11.2□□□□□ -0.62
PCF11-204ENST00000530660 SRD5A1P18405 259 aa11.2□□□□□ -0.62
PCF11-204ENST00000530660 ZNF784Q8NCA9 323 aaPredicted RBP11.2□□□□□ -0.62
PCF11-204ENST00000530660 TMEM158Q8WZ71 300 aa11.2□□□□□ -0.62
PCF11-204ENST00000530660 ZNRD1Q9P1U0 126 aa11.2□□□□□ -0.62
PCF11-204ENST00000530660 U3KQK5 164 aa11.2□□□□□ -0.62
PCF11-204ENST00000530660 LINC01549A6NIU2 74 aa11.19□□□□□ -0.62
PCF11-204ENST00000530660 TNFRSF1AP19438 455 aa11.19□□□□□ -0.62
PCF11-204ENST00000530660 CRIP1P50238 77 aa11.19□□□□□ -0.62
PCF11-204ENST00000530660 GATD1Q8NB37 220 aa11.19□□□□□ -0.62
PCF11-204ENST00000530660 VPREB3Q9UKI3 123 aa11.19□□□□□ -0.62
PCF11-204ENST00000530660 CACNA1EQ15878 2313 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms