RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 TIMM23O14925 209 aa9.2□□□□□ -0.94
USP35-207ENST00000530546 GDF5OSQ5U4N7 250 aa9.2□□□□□ -0.94
USP35-207ENST00000530546 TEX45Q8NA69 505 aa9.2□□□□□ -0.94
USP35-207ENST00000530546 ZNF503Q96F45 646 aa9.2□□□□□ -0.94
USP35-207ENST00000530546 URB1-AS1Q96HZ7 61 aa9.2□□□□□ -0.94
USP35-207ENST00000530546 MAP1LC3CQ9BXW4 147 aa9.2□□□□□ -0.94
USP35-207ENST00000530546 IGHV1-24A0A0C4DH33 117 aa9.19□□□□□ -0.94
USP35-207ENST00000530546 COX7A2P2O60397 106 aa9.19□□□□□ -0.94
USP35-207ENST00000530546 GNLYP22749 145 aa9.19□□□□□ -0.94
USP35-207ENST00000530546 NUP35Q8NFH5 326 aa9.19□□□□□ -0.94
USP35-207ENST00000530546 SLC25A33Q9BSK2 321 aa9.19□□□□□ -0.94
USP35-207ENST00000530546 SSBP3Q9BWW4 388 aaPredicted RBP9.19□□□□□ -0.94
USP35-207ENST00000530546 PRORYQ9H606 182 aa9.19□□□□□ -0.94
USP35-207ENST00000530546 AMMECR1Q9Y4X0 333 aaPredicted RBP9.19□□□□□ -0.94
USP35-207ENST00000530546 ODF1Q14990 250 aa9.19□□□□□ -0.94
USP35-207ENST00000530546 C2orf91Q6ZV80 131 aa9.19□□□□□ -0.94
USP35-207ENST00000530546 PPP1R27Q86WC6 154 aa9.19□□□□□ -0.94
USP35-207ENST00000530546 OR2K2Q8NGT1 345 aa9.19□□□□□ -0.94
USP35-207ENST00000530546 A0A1W2PRE2 83 aa9.18□□□□□ -0.94
USP35-207ENST00000530546 GNG7O60262 68 aa9.18□□□□□ -0.94
USP35-207ENST00000530546 HIST1H1EP10412 219 aaKnown RBP9.18□□□□□ -0.94
USP35-207ENST00000530546 NHLRC2Q8NBF2 726 aa9.18□□□□□ -0.94
USP35-207ENST00000530546 NEU4Q8WWR8 484 aaPredicted RBP9.18□□□□□ -0.94
USP35-207ENST00000530546 INS-IGF2F8WCM5 200 aa9.18□□□□□ -0.94
USP35-207ENST00000530546 C8orf88P0DMB2 117 aa9.18□□□□□ -0.94
USP35-207ENST00000530546 ORM2P19652 201 aa9.18□□□□□ -0.94
USP35-207ENST00000530546 TAS2R45P59539 299 aa9.18□□□□□ -0.94
USP35-207ENST00000530546 PLP1P60201 277 aa9.18□□□□□ -0.94
USP35-207ENST00000530546 LY6G5BQ8NDX9 201 aa9.18□□□□□ -0.94
USP35-207ENST00000530546 C8orf46Q8TAG6 207 aa9.18□□□□□ -0.94
USP35-207ENST00000530546 NPFFR1Q9GZQ6 430 aa9.18□□□□□ -0.94
USP35-207ENST00000530546 WNK2Q9Y3S1 2297 aa9.18□□□□□ -0.94
USP35-207ENST00000530546 IGKV1D-37A0A075B6S9 117 aa9.18□□□□□ -0.94
USP35-207ENST00000530546 CNIH1O95406 144 aa9.18□□□□□ -0.94
USP35-207ENST00000530546 CA1P00915 261 aaPredicted RBP9.18□□□□□ -0.94
USP35-207ENST00000530546 CRYGBP07316 175 aa9.18□□□□□ -0.94
USP35-207ENST00000530546 PYYP10082 97 aa9.18□□□□□ -0.94
USP35-207ENST00000530546 HES1Q14469 280 aa9.18□□□□□ -0.94
USP35-207ENST00000530546 OR10AG1Q8NH19 301 aa9.18□□□□□ -0.94
USP35-207ENST00000530546 SIGMAR1Q99720 223 aa9.18□□□□□ -0.94
USP35-207ENST00000530546 HSPB8Q9UJY1 196 aa9.18□□□□□ -0.94
USP35-207ENST00000530546 A0A1B0GXF2 115 aa9.17□□□□□ -0.94
USP35-207ENST00000530546 TCRBV4S1A1TA0A5B7 111 aa9.17□□□□□ -0.94
USP35-207ENST00000530546 GGTLC3B5MD39 225 aa9.17□□□□□ -0.94
USP35-207ENST00000530546 UBE2L3P68036 154 aaKnown RBP9.17□□□□□ -0.94
USP35-207ENST00000530546 C10orf113Q5VZT2 155 aa9.17□□□□□ -0.94
USP35-207ENST00000530546 FAM168AQ92567 244 aa9.17□□□□□ -0.94
USP35-207ENST00000530546 DPF1Q92782 380 aa9.17□□□□□ -0.94
USP35-207ENST00000530546 JMJD8Q96S16 334 aa9.17□□□□□ -0.94
USP35-207ENST00000530546 ATP6V0BQ99437 205 aa9.17□□□□□ -0.94
USP35-207ENST00000530546 ZNF355PQ9NSJ1 428 aa9.17□□□□□ -0.94
USP35-207ENST00000530546 PKD1L2Q7Z442 2459 aa9.17□□□□□ -0.94
USP35-207ENST00000530546 PSMB11A5LHX3 300 aa9.17□□□□□ -0.94
USP35-207ENST00000530546 C19orf84I3L1E1 186 aa9.17□□□□□ -0.94
USP35-207ENST00000530546 FSTL3O95633 263 aa9.17□□□□□ -0.94
USP35-207ENST00000530546 LINC01545Q5VT33 79 aa9.17□□□□□ -0.94
USP35-207ENST00000530546 PATE2Q6UY27 113 aa9.17□□□□□ -0.94
USP35-207ENST00000530546 SRSF12Q8WXF0 261 aaKnown RBP9.17□□□□□ -0.94
USP35-207ENST00000530546 C19orf24Q9BVV8 132 aa9.17□□□□□ -0.94
USP35-207ENST00000530546 SLC25A2Q9BXI2 301 aa9.17□□□□□ -0.94
USP35-207ENST00000530546 DPM3Q9P2X0 92 aa9.17□□□□□ -0.94
USP35-207ENST00000530546 A0A0G2JLM5 398 aa9.16□□□□□ -0.94
USP35-207ENST00000530546 LY6LH3BQJ8 138 aa9.16□□□□□ -0.94
USP35-207ENST00000530546 RBP4P02753 201 aa9.16□□□□□ -0.94
USP35-207ENST00000530546 AZU1P20160 251 aa9.16□□□□□ -0.94
USP35-207ENST00000530546 SCGB2A2Q13296 93 aa9.16□□□□□ -0.94
USP35-207ENST00000530546 ASH1LQ9NR48 2969 aaKnown RBP9.16□□□□□ -0.94
USP35-207ENST00000530546 ITLN2Q8WWU7 325 aaPredicted RBP9.16□□□□□ -0.94
USP35-207ENST00000530546 FAM167A-AS1Q96KT0 104 aa9.16□□□□□ -0.94
USP35-207ENST00000530546 SSBP4Q9BWG4 385 aaPredicted RBP9.16□□□□□ -0.94
USP35-207ENST00000530546 SOX21Q9Y651 276 aaPredicted RBP9.16□□□□□ -0.94
USP35-207ENST00000530546 TMEM189A5PLL7 270 aa9.15□□□□□ -0.94
USP35-207ENST00000530546 SH2D7A6NKC9 451 aaPredicted RBP9.15□□□□□ -0.94
USP35-207ENST00000530546 TEX22C9J3V5 150 aa9.15□□□□□ -0.94
USP35-207ENST00000530546 H3BUT2 72 aa9.15□□□□□ -0.94
USP35-207ENST00000530546 LINC00173Q6ZV60 143 aa9.15□□□□□ -0.94
USP35-207ENST00000530546 HIGD1CA8MV81 97 aa9.15□□□□□ -0.94
USP35-207ENST00000530546 ZFP36P26651 326 aaKnown RBP9.15□□□□□ -0.94
USP35-207ENST00000530546 HBBP68871 147 aa9.15□□□□□ -0.94
USP35-207ENST00000530546 DTX2Q86UW9 622 aa9.15□□□□□ -0.94
USP35-207ENST00000530546 ZC2HC1AQ96GY0 325 aa9.15□□□□□ -0.94
USP35-207ENST00000530546 CAMPP49913 170 aa9.15□□□□□ -0.95
USP35-207ENST00000530546 LINC00305Q7Z4B0 112 aa9.15□□□□□ -0.95
USP35-207ENST00000530546 THAP8Q8NA92 274 aa9.15□□□□□ -0.95
USP35-207ENST00000530546 OR1L4Q8NGR5 311 aa9.15□□□□□ -0.95
USP35-207ENST00000530546 PAXXQ9BUH6 204 aa9.15□□□□□ -0.95
USP35-207ENST00000530546 MRPL32Q9BYC8 188 aaKnown RBP9.15□□□□□ -0.95
USP35-207ENST00000530546 A0A1W2PPM0 123 aa9.14□□□□□ -0.95
USP35-207ENST00000530546 HSD52Q0P140 79 aa9.14□□□□□ -0.95
USP35-207ENST00000530546 VMO1Q7Z5L0 202 aa9.14□□□□□ -0.95
USP35-207ENST00000530546 F11RQ9Y624 299 aaKnown RBP9.14□□□□□ -0.95
USP35-207ENST00000530546 SPCS1Q9Y6A9 102 aa9.14□□□□□ -0.95
USP35-207ENST00000530546 H3BTX0 84 aa9.14□□□□□ -0.95
USP35-207ENST00000530546 PRTN3P24158 256 aa9.14□□□□□ -0.95
USP35-207ENST00000530546 OR11H6Q8NGC7 330 aa9.14□□□□□ -0.95
USP35-207ENST00000530546 BLNKQ8WV28 456 aa9.14□□□□□ -0.95
USP35-207ENST00000530546 LINC00479Q96M42 142 aa9.14□□□□□ -0.95
USP35-207ENST00000530546 S4R3C0 116 aa9.14□□□□□ -0.95
USP35-207ENST00000530546 KIR3DS1Q14943 382 aa9.13□□□□□ -0.95
USP35-207ENST00000530546 KLF17Q5JT82 389 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms