RNA–Protein interactions for RNA: ENST00000530075.1

GMDS-206, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-206ENST00000530075 ABCA4P78363 2273 aa1.13□□□□□ -2.23
GMDS-206ENST00000530075 VPS13CQ709C8 3753 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 NUP210LQ5VU65 1888 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 TRBV20OR9-2A0A075B6H5 130 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 IGKV3D-7A0A0C4DH55 119 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 IGKV3OR2-268A0A0C4DH90 116 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 SPTY2D1-AS1A0A0U1RR47 76 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 MEIS3P1A6NDR6 274 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 GGT3PA6NGU5 568 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 OR51F1A6NGY5 319 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 KCNK1O00180 336 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 SLC22A1O15245 554 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 NIPSNAP2O75323 286 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 TNNC2P02585 160 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 C1QAP02745 245 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 G6PCP35575 357 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 NKX2-5P52952 324 aaPredicted RBP1.12□□□□□ -2.23
GMDS-206ENST00000530075 GRK1Q15835 563 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 HIST3H3Q16695 136 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 FAM27BQ5VT28 67 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 PTRHD1Q6GMV3 140 aaKnown RBP1.12□□□□□ -2.23
GMDS-206ENST00000530075 C8orf74Q6P047 294 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 Q6ZS92 163 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 C7orf65Q6ZTY9 151 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 GKN2Q86XP6 184 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 BOLA2Q9H3K6 86 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 IL36BQ9NZH7 164 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 GUCA1BQ9UMX6 200 aa1.12□□□□□ -2.23
GMDS-206ENST00000530075 SOX21Q9Y651 276 aaPredicted RBP1.12□□□□□ -2.23
GMDS-206ENST00000530075 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.11□□□□□ -2.23
GMDS-206ENST00000530075 KNL1Q8NG31 2342 aa1.11□□□□□ -2.23
GMDS-206ENST00000530075 MGAM2Q2M2H8 2515 aa1.11□□□□□ -2.23
GMDS-206ENST00000530075 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.11□□□□□ -2.23
GMDS-206ENST00000530075 TGIF2-C20orf24A0A0A6YYL0 155 aa1.11□□□□□ -2.23
GMDS-206ENST00000530075 A0A0J9YY10 115 aa1.11□□□□□ -2.23
GMDS-206ENST00000530075 TRBV10-2A0A0K0K1G8 114 aa1.11□□□□□ -2.23
GMDS-206ENST00000530075 A0A1B0GX78 115 aa1.11□□□□□ -2.23
GMDS-206ENST00000530075 IRGMA1A4Y4 181 aa1.11□□□□□ -2.23
GMDS-206ENST00000530075 EEF1E1-BLOC1S5C9J1V9 151 aa1.11□□□□□ -2.23
GMDS-206ENST00000530075 M0R036 132 aa1.11□□□□□ -2.23
GMDS-206ENST00000530075 IGHV3-7P01780 117 aa1.11□□□□□ -2.23
GMDS-206ENST00000530075 PRM2P04554 102 aa1.11□□□□□ -2.23
GMDS-206ENST00000530075 OR5G3P0C626 314 aa1.11□□□□□ -2.23
GMDS-206ENST00000530075 HIST1H1EP10412 219 aaKnown RBP1.11□□□□□ -2.23
GMDS-206ENST00000530075 FXYD2P54710 66 aa1.11□□□□□ -2.23
GMDS-206ENST00000530075 Q1T7F1 81 aa1.11□□□□□ -2.23
GMDS-206ENST00000530075 ARHGAP11BQ3KRB8 267 aa1.11□□□□□ -2.23
GMDS-206ENST00000530075 C15orf53Q8NAA6 179 aa1.11□□□□□ -2.23
GMDS-206ENST00000530075 SLC35B4Q969S0 331 aa1.11□□□□□ -2.23
GMDS-206ENST00000530075 EFCAB1Q9HAE3 211 aa1.11□□□□□ -2.23
GMDS-206ENST00000530075 CISHQ9NSE2 258 aa1.11□□□□□ -2.23
GMDS-206ENST00000530075 MED29Q9NX70 200 aa1.11□□□□□ -2.23
GMDS-206ENST00000530075 SVEP1Q4LDE5 3571 aa1.11□□□□□ -2.23
GMDS-206ENST00000530075 EML6Q6ZMW3 1958 aa1.1□□□□□ -2.23
GMDS-206ENST00000530075 IGKV2-40A0A087WW87 121 aaPredicted RBP1.1□□□□□ -2.23
GMDS-206ENST00000530075 FABP5P3A8MUU1 101 aa1.1□□□□□ -2.23
GMDS-206ENST00000530075 TRAPPC2LH3BP13 241 aa1.1□□□□□ -2.23
GMDS-206ENST00000530075 IGKV2D-40P01614 121 aaPredicted RBP1.1□□□□□ -2.23
GMDS-206ENST00000530075 UQCRHP07919 91 aa1.1□□□□□ -2.23
GMDS-206ENST00000530075 RPSAP08865 295 aaKnown RBP1.1□□□□□ -2.23
GMDS-206ENST00000530075 NFYAP23511 347 aaPredicted RBP1.1□□□□□ -2.23
GMDS-206ENST00000530075 SPCS3P61009 180 aa1.1□□□□□ -2.23
GMDS-206ENST00000530075 PRB3Q04118 309 aaPredicted RBP1.1□□□□□ -2.23
GMDS-206ENST00000530075 ELOBQ15370 118 aa1.1□□□□□ -2.23
GMDS-206ENST00000530075 IBA57Q5T440 356 aaKnown RBP1.1□□□□□ -2.23
GMDS-206ENST00000530075 FAM173BQ6P4H8 233 aa1.1□□□□□ -2.23
GMDS-206ENST00000530075 ALKAL1Q6UXT8 129 aa1.1□□□□□ -2.23
GMDS-206ENST00000530075 C9orf163Q8N9P6 203 aa1.1□□□□□ -2.23
GMDS-206ENST00000530075 OR8B3Q8NGG8 313 aa1.1□□□□□ -2.23
GMDS-206ENST00000530075 MBD3L1Q8WWY6 194 aa1.1□□□□□ -2.23
GMDS-206ENST00000530075 KLK6Q92876 244 aa1.1□□□□□ -2.23
GMDS-206ENST00000530075 IMP4Q96G21 291 aaKnown RBP1.1□□□□□ -2.23
GMDS-206ENST00000530075 CCL19Q99731 98 aa1.1□□□□□ -2.23
GMDS-206ENST00000530075 SONP18583 2426 aaKnown RBP1.1□□□□□ -2.23
GMDS-206ENST00000530075 POLEQ07864 2286 aa1.09□□□□□ -2.23
GMDS-206ENST00000530075 ROS1P08922 2347 aa1.09□□□□□ -2.23
GMDS-206ENST00000530075 TRAV17A0A0B4J275 112 aa1.09□□□□□ -2.23
GMDS-206ENST00000530075 SMIM23A6NLE4 172 aa1.09□□□□□ -2.23
GMDS-206ENST00000530075 IBA57-AS1B1ANH7 110 aa1.09□□□□□ -2.23
GMDS-206ENST00000530075 SDCBPO00560 298 aaPredicted RBP1.09□□□□□ -2.23
GMDS-206ENST00000530075 AHSA1O95433 338 aa1.09□□□□□ -2.23
GMDS-206ENST00000530075 TNFP01375 233 aa1.09□□□□□ -2.23
GMDS-206ENST00000530075 STATHP02808 62 aa1.09□□□□□ -2.23
GMDS-206ENST00000530075 UBBP0CG47 229 aa1.09□□□□□ -2.23
GMDS-206ENST00000530075 EIF2B2P49770 351 aaKnown RBP1.09□□□□□ -2.23
GMDS-206ENST00000530075 UBE2IP63279 158 aaKnown RBP1.09□□□□□ -2.23
GMDS-206ENST00000530075 CCL20P78556 96 aa1.09□□□□□ -2.23
GMDS-206ENST00000530075 TFF3Q07654 80 aa1.09□□□□□ -2.23
GMDS-206ENST00000530075 OR2F1Q13607 317 aa1.09□□□□□ -2.23
GMDS-206ENST00000530075 ALX1Q15699 326 aa1.09□□□□□ -2.23
GMDS-206ENST00000530075 NDUFA5Q16718 116 aa1.09□□□□□ -2.23
GMDS-206ENST00000530075 C6orf52Q5T4I8 152 aa1.09□□□□□ -2.23
GMDS-206ENST00000530075 SYPL2Q5VXT5 272 aa1.09□□□□□ -2.23
GMDS-206ENST00000530075 RPS19BP1Q86WX3 136 aaKnown RBP1.09□□□□□ -2.23
GMDS-206ENST00000530075 DHFR2Q86XF0 187 aa1.09□□□□□ -2.23
GMDS-206ENST00000530075 C1orf158Q8N1D5 194 aa1.09□□□□□ -2.23
GMDS-206ENST00000530075 TMEM86BQ8N661 226 aa1.09□□□□□ -2.23
GMDS-206ENST00000530075 CT55Q8WUE5 264 aa1.09□□□□□ -2.23
GMDS-206ENST00000530075 OR52E6Q96RD3 313 aa1.09□□□□□ -2.23
GMDS-206ENST00000530075 REG4Q9BYZ8 158 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms