RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 Q9H3A6 140 aa11.02□□□□□ -0.65
TTC39A-216ENST00000530004 IGHV3-49A0A0A0MS15 119 aa11.01□□□□□ -0.65
TTC39A-216ENST00000530004 APOHP02749 345 aaPredicted RBP11.01□□□□□ -0.65
TTC39A-216ENST00000530004 IGHV3OR16-13A0A075B7E8 117 aa11□□□□□ -0.65
TTC39A-216ENST00000530004 IGHV3-74A0A0B4J1X5 117 aa11□□□□□ -0.65
TTC39A-216ENST00000530004 ZNF320A2RRD8 509 aa11□□□□□ -0.65
TTC39A-216ENST00000530004 ADARB2-AS1A8MUL3 147 aa11□□□□□ -0.65
TTC39A-216ENST00000530004 SLC25A5P05141 298 aaKnown RBP11□□□□□ -0.65
TTC39A-216ENST00000530004 LGALS1P09382 135 aaKnown RBP11□□□□□ -0.65
TTC39A-216ENST00000530004 RPL35P42766 123 aaKnown RBP11□□□□□ -0.65
TTC39A-216ENST00000530004 KRTAP21-3Q3LHN1 58 aa11□□□□□ -0.65
TTC39A-216ENST00000530004 TMEM88Q6PEY1 159 aa11□□□□□ -0.65
TTC39A-216ENST00000530004 NDUFA11Q86Y39 141 aa11□□□□□ -0.65
TTC39A-216ENST00000530004 KLHL30-AS1Q8NEE0 82 aa11□□□□□ -0.65
TTC39A-216ENST00000530004 C2CD4CQ8TF44 421 aa11□□□□□ -0.65
TTC39A-216ENST00000530004 C4orf3Q8WVX3 66 aa11□□□□□ -0.65
TTC39A-216ENST00000530004 TMEM190Q8WZ59 177 aa11□□□□□ -0.65
TTC39A-216ENST00000530004 OTORQ9NRC9 128 aa11□□□□□ -0.65
TTC39A-216ENST00000530004 U3KQE9 123 aa11□□□□□ -0.65
TTC39A-216ENST00000530004 A0A1W2PRX2 142 aa11□□□□□ -0.65
TTC39A-216ENST00000530004 DNASE2O00115 360 aaPredicted RBP11□□□□□ -0.65
TTC39A-216ENST00000530004 PEX7O00628 323 aa11□□□□□ -0.65
TTC39A-216ENST00000530004 RPL23P62829 140 aaKnown RBP11□□□□□ -0.65
TTC39A-216ENST00000530004 GNG5P63218 68 aa11□□□□□ -0.65
TTC39A-216ENST00000530004 ADIRFQ15847 76 aa11□□□□□ -0.65
TTC39A-216ENST00000530004 CBLN2Q8IUK8 224 aa11□□□□□ -0.65
TTC39A-216ENST00000530004 EXOC3-AS1Q8N2X6 119 aa11□□□□□ -0.65
TTC39A-216ENST00000530004 TCEAL7Q9BRU2 100 aa11□□□□□ -0.65
TTC39A-216ENST00000530004 SMAD5-AS1Q9Y6J3 95 aa11□□□□□ -0.65
TTC39A-216ENST00000530004 TRBV20OR9-2A0A075B6H5 130 aa10.99□□□□□ -0.65
TTC39A-216ENST00000530004 HELTA6NFD8 242 aa10.99□□□□□ -0.65
TTC39A-216ENST00000530004 SLC17A3O00476 420 aa10.99□□□□□ -0.65
TTC39A-216ENST00000530004 ATF4P18848 351 aaPredicted RBP10.99□□□□□ -0.65
TTC39A-216ENST00000530004 C1orf194Q5T5A4 169 aa10.99□□□□□ -0.65
TTC39A-216ENST00000530004 SHISA2Q6UWI4 295 aa10.99□□□□□ -0.65
TTC39A-216ENST00000530004 SIGLEC15Q6ZMC9 328 aa10.99□□□□□ -0.65
TTC39A-216ENST00000530004 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.99□□□□□ -0.65
TTC39A-216ENST00000530004 HIST1H2BAQ96A08 127 aa10.99□□□□□ -0.65
TTC39A-216ENST00000530004 EPDR1Q9UM22 224 aa10.99□□□□□ -0.65
TTC39A-216ENST00000530004 COL6A5A8TX70 2615 aa10.98□□□□□ -0.65
TTC39A-216ENST00000530004 PDE6HQ13956 83 aa10.98□□□□□ -0.65
TTC39A-216ENST00000530004 RPEL1Q2QD12 228 aa10.98□□□□□ -0.65
TTC39A-216ENST00000530004 NSUN5P1Q3KNT7 163 aa10.98□□□□□ -0.65
TTC39A-216ENST00000530004 FAM106AQ4KMX7 169 aa10.98□□□□□ -0.65
TTC39A-216ENST00000530004 C8orf86Q6ZUL3 223 aa10.98□□□□□ -0.65
TTC39A-216ENST00000530004 LYPD1Q8N2G4 141 aa10.98□□□□□ -0.65
TTC39A-216ENST00000530004 C5orf17Q8NAS9 161 aa10.98□□□□□ -0.65
TTC39A-216ENST00000530004 GPR82Q96P67 336 aa10.98□□□□□ -0.65
TTC39A-216ENST00000530004 RPH3ALQ9UNE2 315 aa10.98□□□□□ -0.65
TTC39A-216ENST00000530004 PGPEP1LA6NFU8 196 aa10.98□□□□□ -0.65
TTC39A-216ENST00000530004 ZNF785A8K8V0 405 aa10.98□□□□□ -0.65
TTC39A-216ENST00000530004 B4DEV8 164 aa10.98□□□□□ -0.65
TTC39A-216ENST00000530004 GALR1P47211 349 aa10.98□□□□□ -0.65
TTC39A-216ENST00000530004 LINC01551Q86U37 167 aa10.98□□□□□ -0.65
TTC39A-216ENST00000530004 GPHB5Q86YW7 130 aa10.98□□□□□ -0.65
TTC39A-216ENST00000530004 LINC00479Q96M42 142 aa10.98□□□□□ -0.65
TTC39A-216ENST00000530004 AURKAIP1Q9NWT8 199 aaPredicted RBP10.98□□□□□ -0.65
TTC39A-216ENST00000530004 IGHV4OR15-8A0A075B7B6 117 aa10.97□□□□□ -0.65
TTC39A-216ENST00000530004 A0A087WW49 117 aa10.97□□□□□ -0.65
TTC39A-216ENST00000530004 C9JCJ5 164 aa10.97□□□□□ -0.65
TTC39A-216ENST00000530004 CNN1P51911 297 aaKnown RBP10.97□□□□□ -0.65
TTC39A-216ENST00000530004 DEFB136Q30KP8 78 aa10.97□□□□□ -0.65
TTC39A-216ENST00000530004 TM4SF20Q53R12 229 aa10.97□□□□□ -0.65
TTC39A-216ENST00000530004 CENPWQ5EE01 88 aa10.97□□□□□ -0.65
TTC39A-216ENST00000530004 C16orf54Q6UWD8 224 aa10.97□□□□□ -0.65
TTC39A-216ENST00000530004 CMTM2Q8TAZ6 248 aa10.97□□□□□ -0.65
TTC39A-216ENST00000530004 ATG101Q9BSB4 218 aa10.97□□□□□ -0.65
TTC39A-216ENST00000530004 A0A087X0K7 114 aa10.96□□□□□ -0.65
TTC39A-216ENST00000530004 TRAV34A0A0B4J273 112 aa10.96□□□□□ -0.65
TTC39A-216ENST00000530004 TCRAP04437 139 aa10.96□□□□□ -0.65
TTC39A-216ENST00000530004 GNG4P50150 75 aa10.96□□□□□ -0.65
TTC39A-216ENST00000530004 OR11H1Q8NG94 326 aa10.96□□□□□ -0.65
TTC39A-216ENST00000530004 AAMDCQ9H7C9 122 aa10.96□□□□□ -0.65
TTC39A-216ENST00000530004 DAZ1Q9NQZ3 744 aaKnown RBP10.96□□□□□ -0.65
TTC39A-216ENST00000530004 SMCO4Q9NRQ5 59 aa10.96□□□□□ -0.65
TTC39A-216ENST00000530004 A0A087WWC5 75 aa10.95□□□□□ -0.66
TTC39A-216ENST00000530004 ZNF253O75346 499 aa10.95□□□□□ -0.66
TTC39A-216ENST00000530004 PSG9Q00887 426 aa10.95□□□□□ -0.66
TTC39A-216ENST00000530004 RNF212Q495C1 297 aa10.95□□□□□ -0.66
TTC39A-216ENST00000530004 OCC1Q8TAD7 63 aa10.95□□□□□ -0.66
TTC39A-216ENST00000530004 GLMPQ8WWB7 406 aa10.95□□□□□ -0.66
TTC39A-216ENST00000530004 IGHV7-4-1A0A0J9YVY3 117 aa10.95□□□□□ -0.66
TTC39A-216ENST00000530004 A0A1W2PS18 150 aa10.95□□□□□ -0.66
TTC39A-216ENST00000530004 K7EMT4 169 aa10.95□□□□□ -0.66
TTC39A-216ENST00000530004 TSPAN4O14817 238 aa10.95□□□□□ -0.66
TTC39A-216ENST00000530004 TAS2R60P59551 318 aa10.95□□□□□ -0.66
TTC39A-216ENST00000530004 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.95□□□□□ -0.66
TTC39A-216ENST00000530004 OR1N2Q8NGR9 330 aa10.95□□□□□ -0.66
TTC39A-216ENST00000530004 GRAMD2BQ96HH9 432 aa10.95□□□□□ -0.66
TTC39A-216ENST00000530004 RAX2Q96IS3 184 aa10.95□□□□□ -0.66
TTC39A-216ENST00000530004 IGF2BP2-AS1Q96M15 143 aa10.95□□□□□ -0.66
TTC39A-216ENST00000530004 DUX3Q96PT4 197 aa10.95□□□□□ -0.66
TTC39A-216ENST00000530004 UFC1Q9Y3C8 167 aa10.95□□□□□ -0.66
TTC39A-216ENST00000530004 LINC01619G3V211 115 aa10.94□□□□□ -0.66
TTC39A-216ENST00000530004 M0R3E3 92 aa10.94□□□□□ -0.66
TTC39A-216ENST00000530004 CCL24O00175 119 aa10.94□□□□□ -0.66
TTC39A-216ENST00000530004 ISLRO14498 428 aa10.94□□□□□ -0.66
TTC39A-216ENST00000530004 HOXD3P31249 432 aaPredicted RBP10.94□□□□□ -0.66
TTC39A-216ENST00000530004 UBE2G1P62253 170 aa10.94□□□□□ -0.66
TTC39A-216ENST00000530004 FHL3Q13643 280 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms