RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 A8MZ25 164 aa10.38□□□□□ -0.75
USF1-209ENST00000529476 ISLRO14498 428 aa10.38□□□□□ -0.75
USF1-209ENST00000529476 MBP02144 154 aa10.38□□□□□ -0.75
USF1-209ENST00000529476 FRMD6-AS1P0C7T7 363 aa10.38□□□□□ -0.75
USF1-209ENST00000529476 PSMB3P49720 205 aa10.38□□□□□ -0.75
USF1-209ENST00000529476 TMEM41BQ5BJD5 291 aa10.38□□□□□ -0.75
USF1-209ENST00000529476 RPP25LQ8N5L8 163 aaKnown RBP10.38□□□□□ -0.75
USF1-209ENST00000529476 ZNF503Q96F45 646 aa10.38□□□□□ -0.75
USF1-209ENST00000529476 C20orf173Q96LM9 149 aa10.38□□□□□ -0.75
USF1-209ENST00000529476 OR51M1Q9H341 326 aa10.38□□□□□ -0.75
USF1-209ENST00000529476 HRH4Q9H3N8 390 aa10.38□□□□□ -0.75
USF1-209ENST00000529476 RPRMQ9NS64 109 aa10.38□□□□□ -0.75
USF1-209ENST00000529476 ZNF586Q9NXT0 402 aa10.38□□□□□ -0.75
USF1-209ENST00000529476 RBMY1BA6NDE4 496 aaKnown RBP10.37□□□□□ -0.75
USF1-209ENST00000529476 RBMY1EA6NEQ0 496 aaKnown RBP10.37□□□□□ -0.75
USF1-209ENST00000529476 SLC17A3O00476 420 aa10.37□□□□□ -0.75
USF1-209ENST00000529476 HMGB3O15347 200 aaKnown RBP10.37□□□□□ -0.75
USF1-209ENST00000529476 OR10J4P0C629 311 aa10.37□□□□□ -0.75
USF1-209ENST00000529476 RBMY1DP0C7P1 496 aaKnown RBP10.37□□□□□ -0.75
USF1-209ENST00000529476 TPT1P13693 172 aaKnown RBP10.37□□□□□ -0.75
USF1-209ENST00000529476 CDC34P49427 236 aaPredicted RBP10.37□□□□□ -0.75
USF1-209ENST00000529476 DEFB1P60022 68 aa10.37□□□□□ -0.75
USF1-209ENST00000529476 EIF5AP63241 154 aaKnown RBP10.37□□□□□ -0.75
USF1-209ENST00000529476 KHDC3LQ587J8 217 aa10.37□□□□□ -0.75
USF1-209ENST00000529476 SAMD13Q5VXD3 122 aa10.37□□□□□ -0.75
USF1-209ENST00000529476 BAP18Q8IXM2 172 aa10.37□□□□□ -0.75
USF1-209ENST00000529476 RNF182Q8N6D2 247 aa10.37□□□□□ -0.75
USF1-209ENST00000529476 STOML3Q8TAV4 291 aa10.37□□□□□ -0.75
USF1-209ENST00000529476 LRRC20Q8TCA0 184 aa10.37□□□□□ -0.75
USF1-209ENST00000529476 PAXXQ9BUH6 204 aa10.37□□□□□ -0.75
USF1-209ENST00000529476 BIRC6Q9NR09 4857 aa10.37□□□□□ -0.75
USF1-209ENST00000529476 PLA2G2EQ9NZK7 142 aa10.37□□□□□ -0.75
USF1-209ENST00000529476 EPPK1P58107 5090 aaKnown RBP10.36□□□□□ -0.75
USF1-209ENST00000529476 KNCNA6PVL3 124 aa10.36□□□□□ -0.75
USF1-209ENST00000529476 OR7C2O60412 319 aa10.36□□□□□ -0.75
USF1-209ENST00000529476 SEC11BP0C7V7 166 aa10.36□□□□□ -0.75
USF1-209ENST00000529476 HIST1H1EP10412 219 aaKnown RBP10.36□□□□□ -0.75
USF1-209ENST00000529476 HLA-DMBP28068 263 aa10.36□□□□□ -0.75
USF1-209ENST00000529476 TAS2R45P59539 299 aa10.36□□□□□ -0.75
USF1-209ENST00000529476 GUK1Q16774 197 aa10.36□□□□□ -0.75
USF1-209ENST00000529476 AKR1C8PQ5T2L2 129 aa10.36□□□□□ -0.75
USF1-209ENST00000529476 LCN15Q6UWW0 184 aa10.36□□□□□ -0.75
USF1-209ENST00000529476 SSX7Q7RTT5 188 aa10.36□□□□□ -0.75
USF1-209ENST00000529476 BLNKQ8WV28 456 aa10.36□□□□□ -0.75
USF1-209ENST00000529476 RAB24Q969Q5 203 aa10.36□□□□□ -0.75
USF1-209ENST00000529476 FXYD5Q96DB9 178 aa10.36□□□□□ -0.75
USF1-209ENST00000529476 SAT2Q96F10 170 aaPredicted RBP10.36□□□□□ -0.75
USF1-209ENST00000529476 ACTR3CQ9C0K3 210 aaPredicted RBP10.36□□□□□ -0.75
USF1-209ENST00000529476 ZNF331Q9NQX6 463 aaPredicted RBP10.36□□□□□ -0.75
USF1-209ENST00000529476 AGRNO00468 2067 aa10.36□□□□□ -0.75
USF1-209ENST00000529476 TRBV19A0A075B6N1 114 aa10.35□□□□□ -0.75
USF1-209ENST00000529476 UBE2L3P68036 154 aaKnown RBP10.35□□□□□ -0.75
USF1-209ENST00000529476 ZNF726P1Q15940 193 aa10.35□□□□□ -0.75
USF1-209ENST00000529476 ACTL10Q5JWF8 245 aa10.35□□□□□ -0.75
USF1-209ENST00000529476 LINC00322Q6ZN03 302 aaPredicted RBP10.35□□□□□ -0.75
USF1-209ENST00000529476 RNF141Q8WVD5 230 aa10.35□□□□□ -0.75
USF1-209ENST00000529476 TMED6Q8WW62 240 aa10.35□□□□□ -0.75
USF1-209ENST00000529476 SLC50A1Q9BRV3 221 aa10.35□□□□□ -0.75
USF1-209ENST00000529476 NDUFB4O95168 129 aa10.34□□□□□ -0.75
USF1-209ENST00000529476 NBEAP1P0C6P0 100 aa10.34□□□□□ -0.75
USF1-209ENST00000529476 PRB4P10163 310 aaPredicted RBP10.34□□□□□ -0.75
USF1-209ENST00000529476 RPL35AP18077 110 aaKnown RBP10.34□□□□□ -0.75
USF1-209ENST00000529476 C4BPBP20851 252 aa10.34□□□□□ -0.75
USF1-209ENST00000529476 GDF5OSQ5U4N7 250 aa10.34□□□□□ -0.75
USF1-209ENST00000529476 SLC51BQ86UW2 128 aa10.34□□□□□ -0.75
USF1-209ENST00000529476 ASCL2Q99929 193 aa10.34□□□□□ -0.75
USF1-209ENST00000529476 BOLA1Q9Y3E2 137 aa10.34□□□□□ -0.75
USF1-209ENST00000529476 LOC102724200A0A096LPH7 203 aaPredicted RBP10.33□□□□□ -0.76
USF1-209ENST00000529476 F6UB75 175 aa10.33□□□□□ -0.76
USF1-209ENST00000529476 ZNF253O75346 499 aa10.33□□□□□ -0.76
USF1-209ENST00000529476 STAG3L2P0CL84 134 aa10.33□□□□□ -0.76
USF1-209ENST00000529476 STAG3L3P0CL85 134 aa10.33□□□□□ -0.76
USF1-209ENST00000529476 ARL14EPLP0DKL9 152 aa10.33□□□□□ -0.76
USF1-209ENST00000529476 PSG3Q16557 428 aa10.33□□□□□ -0.76
USF1-209ENST00000529476 PQLC2Q6ZP29 291 aa10.33□□□□□ -0.76
USF1-209ENST00000529476 ZNF738Q8NE65 137 aa10.33□□□□□ -0.76
USF1-209ENST00000529476 PHYHIPLQ96FC7 376 aa10.33□□□□□ -0.76
USF1-209ENST00000529476 B9D2Q9BPU9 175 aa10.33□□□□□ -0.76
USF1-209ENST00000529476 CTXND1A0A1B0GTU2 59 aa10.32□□□□□ -0.76
USF1-209ENST00000529476 BOLA2-SMG1P6H3BVE0 249 aa10.32□□□□□ -0.76
USF1-209ENST00000529476 FHITP49789 147 aa10.32□□□□□ -0.76
USF1-209ENST00000529476 PDE6HQ13956 83 aa10.32□□□□□ -0.76
USF1-209ENST00000529476 FOXI2Q6ZQN5 318 aa10.32□□□□□ -0.76
USF1-209ENST00000529476 SBSPONQ8IVN8 264 aa10.32□□□□□ -0.76
USF1-209ENST00000529476 STHQ8IWL8 128 aa10.32□□□□□ -0.76
USF1-209ENST00000529476 SAV1Q9H4B6 383 aaPredicted RBP10.32□□□□□ -0.76
USF1-209ENST00000529476 ZNF705FA8MVS1 300 aaPredicted RBP10.31□□□□□ -0.76
USF1-209ENST00000529476 UMAD1C9J7I0 102 aa10.31□□□□□ -0.76
USF1-209ENST00000529476 H3BMM0 161 aa10.31□□□□□ -0.76
USF1-209ENST00000529476 ZNF705DP0CH99 300 aaPredicted RBP10.31□□□□□ -0.76
USF1-209ENST00000529476 ZNF705BP0CI00 300 aaPredicted RBP10.31□□□□□ -0.76
USF1-209ENST00000529476 HLA-DRB4P13762 266 aa10.31□□□□□ -0.76
USF1-209ENST00000529476 GCHFRP30047 84 aa10.31□□□□□ -0.76
USF1-209ENST00000529476 PSG9Q00887 426 aa10.31□□□□□ -0.76
USF1-209ENST00000529476 HAGHQ16775 308 aa10.31□□□□□ -0.76
USF1-209ENST00000529476 TRPT1Q86TN4 253 aaKnown RBP10.31□□□□□ -0.76
USF1-209ENST00000529476 EXOC3-AS1Q8N2X6 119 aa10.31□□□□□ -0.76
USF1-209ENST00000529476 FAM213BQ8TBF2 198 aa10.31□□□□□ -0.76
USF1-209ENST00000529476 RPUSD4Q96CM3 377 aaKnown RBP10.31□□□□□ -0.76
USF1-209ENST00000529476 KRTAP17-1Q9BYP8 105 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms