RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 OR1L4Q8NGR5 311 aa9.48□□□□□ -0.89
SCN3B-205ENST00000528267 SCGB1C1Q8TD33 95 aa9.48□□□□□ -0.89
SCN3B-205ENST00000528267 ZNF503Q96F45 646 aa9.48□□□□□ -0.89
SCN3B-205ENST00000528267 PFDN5Q99471 154 aa9.48□□□□□ -0.89
SCN3B-205ENST00000528267 TM2D3Q9BRN9 247 aa9.48□□□□□ -0.89
SCN3B-205ENST00000528267 TUBA4BQ9H853 241 aa9.48□□□□□ -0.89
SCN3B-205ENST00000528267 SEC11BP0C7V7 166 aa9.47□□□□□ -0.89
SCN3B-205ENST00000528267 PYYP10082 97 aa9.47□□□□□ -0.89
SCN3B-205ENST00000528267 RPL35AP18077 110 aaKnown RBP9.47□□□□□ -0.89
SCN3B-205ENST00000528267 RPL7P18124 248 aaKnown RBP9.47□□□□□ -0.89
SCN3B-205ENST00000528267 RAB2AP61019 212 aa9.47□□□□□ -0.89
SCN3B-205ENST00000528267 NDUFA5Q16718 116 aa9.47□□□□□ -0.89
SCN3B-205ENST00000528267 FAM78BQ5VT40 261 aa9.47□□□□□ -0.89
SCN3B-205ENST00000528267 RNF182Q8N6D2 247 aa9.47□□□□□ -0.89
SCN3B-205ENST00000528267 GATAD1Q8WUU5 269 aa9.47□□□□□ -0.89
SCN3B-205ENST00000528267 GNPNAT1Q96EK6 184 aaPredicted RBP9.47□□□□□ -0.89
SCN3B-205ENST00000528267 GPR82Q96P67 336 aa9.47□□□□□ -0.89
SCN3B-205ENST00000528267 PFDN2Q9UHV9 154 aa9.47□□□□□ -0.89
SCN3B-205ENST00000528267 LOC102724200A0A096LPH7 203 aaPredicted RBP9.46□□□□□ -0.9
SCN3B-205ENST00000528267 C17orf112F2Z3M2 114 aa9.46□□□□□ -0.9
SCN3B-205ENST00000528267 F6UB75 175 aa9.46□□□□□ -0.9
SCN3B-205ENST00000528267 GIG44P09565 113 aaPredicted RBP9.46□□□□□ -0.9
SCN3B-205ENST00000528267 SPP1P10451 314 aa9.46□□□□□ -0.9
SCN3B-205ENST00000528267 PSMB3P49720 205 aa9.46□□□□□ -0.9
SCN3B-205ENST00000528267 TRPT1Q86TN4 253 aaKnown RBP9.46□□□□□ -0.9
SCN3B-205ENST00000528267 LRRC20Q8TCA0 184 aa9.46□□□□□ -0.9
SCN3B-205ENST00000528267 PCNPQ8WW12 178 aaKnown RBP9.46□□□□□ -0.9
SCN3B-205ENST00000528267 SAT2Q96F10 170 aaPredicted RBP9.46□□□□□ -0.9
SCN3B-205ENST00000528267 ZNF586Q9NXT0 402 aa9.46□□□□□ -0.9
SCN3B-205ENST00000528267 PLA2G2EQ9NZK7 142 aa9.46□□□□□ -0.9
SCN3B-205ENST00000528267 TIMM9Q9Y5J7 89 aa9.46□□□□□ -0.9
SCN3B-205ENST00000528267 ISLRO14498 428 aa9.45□□□□□ -0.9
SCN3B-205ENST00000528267 NMBP08949 121 aa9.45□□□□□ -0.9
SCN3B-205ENST00000528267 SULT1A2P50226 295 aa9.45□□□□□ -0.9
SCN3B-205ENST00000528267 SSX7Q7RTT5 188 aa9.45□□□□□ -0.9
SCN3B-205ENST00000528267 ZNF709Q8N972 641 aa9.45□□□□□ -0.9
SCN3B-205ENST00000528267 OR2G3Q8NGZ4 309 aa9.45□□□□□ -0.9
SCN3B-205ENST00000528267 RNF141Q8WVD5 230 aa9.45□□□□□ -0.9
SCN3B-205ENST00000528267 C16orf92Q96LL3 132 aa9.45□□□□□ -0.9
SCN3B-205ENST00000528267 LINC00052Q96N35 136 aa9.45□□□□□ -0.9
SCN3B-205ENST00000528267 ZNF331Q9NQX6 463 aaPredicted RBP9.45□□□□□ -0.9
SCN3B-205ENST00000528267 NDUFB4O95168 129 aa9.44□□□□□ -0.9
SCN3B-205ENST00000528267 ATF4P18848 351 aaPredicted RBP9.44□□□□□ -0.9
SCN3B-205ENST00000528267 ACTL10Q5JWF8 245 aa9.44□□□□□ -0.9
SCN3B-205ENST00000528267 BPIFA4PQ86YQ2 179 aa9.44□□□□□ -0.9
SCN3B-205ENST00000528267 FXYD5Q96DB9 178 aa9.44□□□□□ -0.9
SCN3B-205ENST00000528267 PSMG3Q9BT73 122 aaPredicted RBP9.44□□□□□ -0.9
SCN3B-205ENST00000528267 HRH4Q9H3N8 390 aa9.44□□□□□ -0.9
SCN3B-205ENST00000528267 KCNIP2Q9NS61 270 aa9.44□□□□□ -0.9
SCN3B-205ENST00000528267 TMEM14CQ9P0S9 112 aa9.44□□□□□ -0.9
SCN3B-205ENST00000528267 FUT9Q9Y231 359 aa9.44□□□□□ -0.9
SCN3B-205ENST00000528267 NBEAL2Q6ZNJ1 2754 aa9.44□□□□□ -0.9
SCN3B-205ENST00000528267 H3BMM0 161 aa9.43□□□□□ -0.9
SCN3B-205ENST00000528267 HLA-DRB4P13762 266 aa9.43□□□□□ -0.9
SCN3B-205ENST00000528267 S100A7P31151 101 aa9.43□□□□□ -0.9
SCN3B-205ENST00000528267 MEOX2P50222 304 aa9.43□□□□□ -0.9
SCN3B-205ENST00000528267 CMC4P56277 68 aaPredicted RBP9.43□□□□□ -0.9
SCN3B-205ENST00000528267 SNRPD3P62318 126 aaKnown RBP9.43□□□□□ -0.9
SCN3B-205ENST00000528267 RPP25LQ8N5L8 163 aaKnown RBP9.43□□□□□ -0.9
SCN3B-205ENST00000528267 MRPL32Q9BYC8 188 aaKnown RBP9.43□□□□□ -0.9
SCN3B-205ENST00000528267 SAV1Q9H4B6 383 aaPredicted RBP9.43□□□□□ -0.9
SCN3B-205ENST00000528267 HLA-DRB4X5D2U9 266 aa9.43□□□□□ -0.9
SCN3B-205ENST00000528267 STARD9Q9P2P6 4700 aa9.42□□□□□ -0.9
SCN3B-205ENST00000528267 TRBV19A0A075B6N1 114 aa9.42□□□□□ -0.9
SCN3B-205ENST00000528267 ZNF705EA8MWA4 302 aaPredicted RBP9.42□□□□□ -0.9
SCN3B-205ENST00000528267 UMAD1C9J7I0 102 aa9.42□□□□□ -0.9
SCN3B-205ENST00000528267 OR10J4P0C629 311 aa9.42□□□□□ -0.9
SCN3B-205ENST00000528267 ZNF705DP0CH99 300 aaPredicted RBP9.42□□□□□ -0.9
SCN3B-205ENST00000528267 ZNF705BP0CI00 300 aaPredicted RBP9.42□□□□□ -0.9
SCN3B-205ENST00000528267 M6PRP20645 277 aa9.42□□□□□ -0.9
SCN3B-205ENST00000528267 RAB5CP51148 216 aa9.42□□□□□ -0.9
SCN3B-205ENST00000528267 ZNF726P1Q15940 193 aa9.42□□□□□ -0.9
SCN3B-205ENST00000528267 FAM122CQ6P4D5 195 aa9.42□□□□□ -0.9
SCN3B-205ENST00000528267 SLC7A5P1Q8MH63 180 aa9.42□□□□□ -0.9
SCN3B-205ENST00000528267 OVOL2Q9BRP0 275 aa9.42□□□□□ -0.9
SCN3B-205ENST00000528267 A0A0J9YX75 114 aa9.41□□□□□ -0.9
SCN3B-205ENST00000528267 LINC00862A6NCI5 91 aa9.41□□□□□ -0.9
SCN3B-205ENST00000528267 A8MTW9 85 aa9.41□□□□□ -0.9
SCN3B-205ENST00000528267 ZNF705FA8MVS1 300 aaPredicted RBP9.41□□□□□ -0.9
SCN3B-205ENST00000528267 PRAC2D3DTV9 90 aa9.41□□□□□ -0.9
SCN3B-205ENST00000528267 HMGB3O15347 200 aaKnown RBP9.41□□□□□ -0.9
SCN3B-205ENST00000528267 NHLRC4P0CG21 123 aaPredicted RBP9.41□□□□□ -0.9
SCN3B-205ENST00000528267 ID1P41134 155 aa9.41□□□□□ -0.9
SCN3B-205ENST00000528267 BLOC1S1P78537 153 aa9.41□□□□□ -0.9
SCN3B-205ENST00000528267 SERF2P84101 59 aa9.41□□□□□ -0.9
SCN3B-205ENST00000528267 DEFB135Q30KP9 77 aa9.41□□□□□ -0.9
SCN3B-205ENST00000528267 ACOT6Q3I5F7 207 aaPredicted RBP9.41□□□□□ -0.9
SCN3B-205ENST00000528267 AKR1C8PQ5T2L2 129 aa9.41□□□□□ -0.9
SCN3B-205ENST00000528267 LCN15Q6UWW0 184 aa9.41□□□□□ -0.9
SCN3B-205ENST00000528267 FOXI2Q6ZQN5 318 aa9.41□□□□□ -0.9
SCN3B-205ENST00000528267 S100A7AQ86SG5 101 aa9.41□□□□□ -0.9
SCN3B-205ENST00000528267 STHQ8IWL8 128 aa9.41□□□□□ -0.9
SCN3B-205ENST00000528267 OR10G4Q8NGN3 311 aa9.41□□□□□ -0.9
SCN3B-205ENST00000528267 OR10G9Q8NGN4 311 aa9.41□□□□□ -0.9
SCN3B-205ENST00000528267 OR10G7Q8NGN6 311 aa9.41□□□□□ -0.9
SCN3B-205ENST00000528267 RCHY1Q96PM5 261 aa9.41□□□□□ -0.9
SCN3B-205ENST00000528267 RPRMQ9NS64 109 aa9.41□□□□□ -0.9
SCN3B-205ENST00000528267 KIR2DL5BA0A0G2JN68 375 aa9.4□□□□□ -0.9
SCN3B-205ENST00000528267 KIR2DL5BA0A0G2JPC4 375 aa9.4□□□□□ -0.9
SCN3B-205ENST00000528267 M0R3E3 92 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms