RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 ATG101Q9BSB4 218 aa13.47□□□□□ -0.25
PCDHA6-202ENST00000527624 GNB4Q9HAV0 340 aa13.47□□□□□ -0.25
PCDHA6-202ENST00000527624 NAGKQ9UJ70 344 aa13.47□□□□□ -0.25
PCDHA6-202ENST00000527624 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.47□□□□□ -0.25
PCDHA6-202ENST00000527624 Q6ZWC4 215 aa13.47□□□□□ -0.25
PCDHA6-202ENST00000527624 OR4F17Q8NGA8 305 aa13.47□□□□□ -0.25
PCDHA6-202ENST00000527624 A0A096LNT2 108 aa13.46□□□□□ -0.25
PCDHA6-202ENST00000527624 TCRAP04437 139 aa13.46□□□□□ -0.25
PCDHA6-202ENST00000527624 IGLC2P0DOY2 106 aa13.46□□□□□ -0.25
PCDHA6-202ENST00000527624 KIAA1644Q3SXP7 199 aa13.46□□□□□ -0.25
PCDHA6-202ENST00000527624 OTORQ9NRC9 128 aa13.46□□□□□ -0.25
PCDHA6-202ENST00000527624 NAV2Q8IVL1 2488 aa13.46□□□□□ -0.26
PCDHA6-202ENST00000527624 TRBV19A0A075B6N1 114 aa13.45□□□□□ -0.26
PCDHA6-202ENST00000527624 CLEC3BP05452 202 aa13.45□□□□□ -0.26
PCDHA6-202ENST00000527624 OR10J3Q5JRS4 329 aa13.45□□□□□ -0.26
PCDHA6-202ENST00000527624 PRR27Q6MZM9 219 aa13.45□□□□□ -0.26
PCDHA6-202ENST00000527624 LINC00469Q8N7U9 141 aa13.45□□□□□ -0.26
PCDHA6-202ENST00000527624 SMIM12Q96EX1 92 aa13.45□□□□□ -0.26
PCDHA6-202ENST00000527624 GRAMD2BQ96HH9 432 aa13.45□□□□□ -0.26
PCDHA6-202ENST00000527624 TXN2Q99757 166 aa13.45□□□□□ -0.26
PCDHA6-202ENST00000527624 CSPG4Q6UVK1 2322 aa13.45□□□□□ -0.26
PCDHA6-202ENST00000527624 TRAV41A0A0B4J266 112 aa13.45□□□□□ -0.26
PCDHA6-202ENST00000527624 BMPR1BO00238 502 aa13.45□□□□□ -0.26
PCDHA6-202ENST00000527624 SCGB2A1O75556 95 aa13.45□□□□□ -0.26
PCDHA6-202ENST00000527624 LINC01356Q8N9X3 169 aa13.45□□□□□ -0.26
PCDHA6-202ENST00000527624 GPR82Q96P67 336 aa13.45□□□□□ -0.26
PCDHA6-202ENST00000527624 MRPS12O15235 138 aaKnown RBP13.44□□□□□ -0.26
PCDHA6-202ENST00000527624 CD33P20138 364 aa13.44□□□□□ -0.26
PCDHA6-202ENST00000527624 RASL11AQ6T310 242 aa13.44□□□□□ -0.26
PCDHA6-202ENST00000527624 WIPF2Q8TF74 440 aaPredicted RBP13.44□□□□□ -0.26
PCDHA6-202ENST00000527624 CCDC140Q96MF4 163 aa13.44□□□□□ -0.26
PCDHA6-202ENST00000527624 NDUFAF3Q9BU61 184 aa13.44□□□□□ -0.26
PCDHA6-202ENST00000527624 ZNF331Q9NQX6 463 aaPredicted RBP13.44□□□□□ -0.26
PCDHA6-202ENST00000527624 TRAV8-1A0A0A6YYK1 113 aa13.44□□□□□ -0.26
PCDHA6-202ENST00000527624 RNF223E7ERA6 249 aa13.44□□□□□ -0.26
PCDHA6-202ENST00000527624 CLEC19AQ6UXS0 136 aa13.44□□□□□ -0.26
PCDHA6-202ENST00000527624 NUP35Q8NFH5 326 aa13.44□□□□□ -0.26
PCDHA6-202ENST00000527624 MLST8Q9BVC4 326 aa13.44□□□□□ -0.26
PCDHA6-202ENST00000527624 SAMD10Q9BYL1 202 aa13.44□□□□□ -0.26
PCDHA6-202ENST00000527624 A6NDX4 124 aa13.43□□□□□ -0.26
PCDHA6-202ENST00000527624 KLK9Q2XQG4 91 aa13.43□□□□□ -0.26
PCDHA6-202ENST00000527624 GOLT1AQ6ZVE7 132 aa13.43□□□□□ -0.26
PCDHA6-202ENST00000527624 KLK9Q9UKQ9 250 aa13.43□□□□□ -0.26
PCDHA6-202ENST00000527624 ZANQ9Y493 2812 aa13.43□□□□□ -0.26
PCDHA6-202ENST00000527624 TGFAP01135 160 aa13.43□□□□□ -0.26
PCDHA6-202ENST00000527624 APCSP02743 223 aa13.43□□□□□ -0.26
PCDHA6-202ENST00000527624 GATA3P23771 443 aa13.43□□□□□ -0.26
PCDHA6-202ENST00000527624 SRIP30626 198 aa13.43□□□□□ -0.26
PCDHA6-202ENST00000527624 C1orf194Q5T5A4 169 aa13.43□□□□□ -0.26
PCDHA6-202ENST00000527624 SIGLEC15Q6ZMC9 328 aa13.43□□□□□ -0.26
PCDHA6-202ENST00000527624 S100A7AQ86SG5 101 aa13.43□□□□□ -0.26
PCDHA6-202ENST00000527624 TSKUQ8WUA8 353 aa13.43□□□□□ -0.26
PCDHA6-202ENST00000527624 FMC1Q96HJ9 113 aa13.43□□□□□ -0.26
PCDHA6-202ENST00000527624 ZNF414Q96IQ9 312 aa13.43□□□□□ -0.26
PCDHA6-202ENST00000527624 ZNF253O75346 499 aa13.42□□□□□ -0.26
PCDHA6-202ENST00000527624 RABAC1Q9UI14 185 aa13.42□□□□□ -0.26
PCDHA6-202ENST00000527624 GPX1P07203 203 aa13.41□□□□□ -0.26
PCDHA6-202ENST00000527624 BLCAPP62952 87 aa13.41□□□□□ -0.26
PCDHA6-202ENST00000527624 SLAQ13239 276 aa13.41□□□□□ -0.26
PCDHA6-202ENST00000527624 C19orf54Q5BKX5 351 aa13.41□□□□□ -0.26
PCDHA6-202ENST00000527624 TOMM20LQ6UXN7 152 aa13.41□□□□□ -0.26
PCDHA6-202ENST00000527624 EEF1AKMT3Q96AZ1 226 aa13.41□□□□□ -0.26
PCDHA6-202ENST00000527624 NEU1Q99519 415 aa13.41□□□□□ -0.26
PCDHA6-202ENST00000527624 RNF24Q9Y225 148 aa13.41□□□□□ -0.26
PCDHA6-202ENST00000527624 HIGD1CA8MV81 97 aa13.41□□□□□ -0.26
PCDHA6-202ENST00000527624 ZNF705FA8MVS1 300 aaPredicted RBP13.41□□□□□ -0.26
PCDHA6-202ENST00000527624 LTAP01374 205 aa13.41□□□□□ -0.26
PCDHA6-202ENST00000527624 ZNF705DP0CH99 300 aaPredicted RBP13.41□□□□□ -0.26
PCDHA6-202ENST00000527624 ZNF705BP0CI00 300 aaPredicted RBP13.41□□□□□ -0.26
PCDHA6-202ENST00000527624 SIGLECL1Q8N7X8 197 aa13.41□□□□□ -0.26
PCDHA6-202ENST00000527624 RCHY1Q96PM5 261 aa13.41□□□□□ -0.26
PCDHA6-202ENST00000527624 KIR2DL5BA0A0G2JN68 375 aa13.4□□□□□ -0.26
PCDHA6-202ENST00000527624 KIR2DL5BA0A0G2JPC4 375 aa13.4□□□□□ -0.26
PCDHA6-202ENST00000527624 ATP5G2Q06055 141 aa13.4□□□□□ -0.26
PCDHA6-202ENST00000527624 Q6ZS46 218 aa13.4□□□□□ -0.26
PCDHA6-202ENST00000527624 Q71RC1 249 aaPredicted RBP13.4□□□□□ -0.26
PCDHA6-202ENST00000527624 KIR2DL5AQ8N109 375 aa13.4□□□□□ -0.26
PCDHA6-202ENST00000527624 M0R3E3 92 aa13.4□□□□□ -0.26
PCDHA6-202ENST00000527624 LINC00322Q6ZN03 302 aaPredicted RBP13.4□□□□□ -0.26
PCDHA6-202ENST00000527624 KCNS1Q96KK3 526 aa13.4□□□□□ -0.26
PCDHA6-202ENST00000527624 PRSS22Q9GZN4 317 aa13.4□□□□□ -0.26
PCDHA6-202ENST00000527624 A0A1W2PS18 150 aa13.39□□□□□ -0.27
PCDHA6-202ENST00000527624 DEFB113Q30KQ7 82 aa13.39□□□□□ -0.27
PCDHA6-202ENST00000527624 GDF5OSQ5U4N7 250 aa13.39□□□□□ -0.27
PCDHA6-202ENST00000527624 PRNTQ86SH4 94 aa13.39□□□□□ -0.27
PCDHA6-202ENST00000527624 Q86TA4 180 aa13.39□□□□□ -0.27
PCDHA6-202ENST00000527624 ASCL2Q99929 193 aa13.39□□□□□ -0.27
PCDHA6-202ENST00000527624 ZFAND3Q9H8U3 227 aa13.39□□□□□ -0.27
PCDHA6-202ENST00000527624 IGLV2-11P01706 119 aa13.39□□□□□ -0.27
PCDHA6-202ENST00000527624 TRGV3P03979 118 aa13.39□□□□□ -0.27
PCDHA6-202ENST00000527624 CRIP2P52943 208 aaPredicted RBP13.39□□□□□ -0.27
PCDHA6-202ENST00000527624 LBHQ53QV2 105 aaPredicted RBP13.39□□□□□ -0.27
PCDHA6-202ENST00000527624 Q5PR19 223 aa13.39□□□□□ -0.27
PCDHA6-202ENST00000527624 TEX43Q6ZNM6 134 aa13.39□□□□□ -0.27
PCDHA6-202ENST00000527624 TRBV7-1A0A0A6YYK4 115 aa13.38□□□□□ -0.27
PCDHA6-202ENST00000527624 C19orf71A6NCJ1 209 aa13.38□□□□□ -0.27
PCDHA6-202ENST00000527624 IGF1P05019 195 aa13.38□□□□□ -0.27
PCDHA6-202ENST00000527624 RPL7P18124 248 aaKnown RBP13.38□□□□□ -0.27
PCDHA6-202ENST00000527624 AMTP48728 403 aa13.38□□□□□ -0.27
PCDHA6-202ENST00000527624 DEFB112Q30KQ8 113 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms