RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 IGHV4-28A0A0C4DH34 117 aa12.23□□□□□ -0.45
NR1H3-229ENST00000527464 F6UB75 175 aa12.23□□□□□ -0.45
NR1H3-229ENST00000527464 IGKV3-20P01619 116 aa12.23□□□□□ -0.45
NR1H3-229ENST00000527464 CXCL3P19876 107 aa12.23□□□□□ -0.45
NR1H3-229ENST00000527464 CEMP1Q6PRD7 247 aaPredicted RBP12.23□□□□□ -0.45
NR1H3-229ENST00000527464 ZNF709Q8N972 641 aa12.23□□□□□ -0.45
NR1H3-229ENST00000527464 C11orf45Q8TAV5 145 aa12.23□□□□□ -0.45
NR1H3-229ENST00000527464 NEU1Q99519 415 aa12.23□□□□□ -0.45
NR1H3-229ENST00000527464 HRH4Q9H3N8 390 aa12.23□□□□□ -0.45
NR1H3-229ENST00000527464 KCNIP2Q9NS61 270 aa12.23□□□□□ -0.45
NR1H3-229ENST00000527464 SMIM9A6NGZ8 99 aa12.22□□□□□ -0.45
NR1H3-229ENST00000527464 JTBO76095 146 aa12.22□□□□□ -0.45
NR1H3-229ENST00000527464 AMBPP02760 352 aa12.22□□□□□ -0.45
NR1H3-229ENST00000527464 PMS2P11Q13670 270 aa12.22□□□□□ -0.45
NR1H3-229ENST00000527464 PSG3Q16557 428 aa12.22□□□□□ -0.45
NR1H3-229ENST00000527464 GUK1Q16774 197 aa12.22□□□□□ -0.45
NR1H3-229ENST00000527464 IGFL4Q6B9Z1 124 aa12.22□□□□□ -0.45
NR1H3-229ENST00000527464 ZNF705AQ6ZN79 300 aaPredicted RBP12.22□□□□□ -0.45
NR1H3-229ENST00000527464 RNF182Q8N6D2 247 aa12.22□□□□□ -0.45
NR1H3-229ENST00000527464 ZNF738Q8NE65 137 aa12.22□□□□□ -0.45
NR1H3-229ENST00000527464 ZNF331Q9NQX6 463 aaPredicted RBP12.22□□□□□ -0.45
NR1H3-229ENST00000527464 KLK5Q9Y337 293 aaPredicted RBP12.22□□□□□ -0.45
NR1H3-229ENST00000527464 SACSQ9NZJ4 4579 aa12.22□□□□□ -0.45
NR1H3-229ENST00000527464 RBMY1A1P0DJD3 496 aaKnown RBP12.21□□□□□ -0.45
NR1H3-229ENST00000527464 RBMY1CP0DJD4 496 aa12.21□□□□□ -0.45
NR1H3-229ENST00000527464 IGLC2P0DOY2 106 aa12.21□□□□□ -0.45
NR1H3-229ENST00000527464 CLINT1Q14677 625 aa12.21□□□□□ -0.45
NR1H3-229ENST00000527464 RBMY1FQ15415 496 aaKnown RBP12.21□□□□□ -0.45
NR1H3-229ENST00000527464 MORN5Q5VZ52 161 aa12.21□□□□□ -0.45
NR1H3-229ENST00000527464 WDR61Q9GZS3 305 aaKnown RBP12.21□□□□□ -0.45
NR1H3-229ENST00000527464 HSPB11Q9Y547 144 aa12.21□□□□□ -0.45
NR1H3-229ENST00000527464 ZNF705FA8MVS1 300 aaPredicted RBP12.2□□□□□ -0.46
NR1H3-229ENST00000527464 DEFB4AO15263 64 aa12.2□□□□□ -0.46
NR1H3-229ENST00000527464 ZNF705DP0CH99 300 aaPredicted RBP12.2□□□□□ -0.46
NR1H3-229ENST00000527464 ZNF705BP0CI00 300 aaPredicted RBP12.2□□□□□ -0.46
NR1H3-229ENST00000527464 RPL12P30050 165 aaKnown RBP12.2□□□□□ -0.46
NR1H3-229ENST00000527464 CNN1P51911 297 aaKnown RBP12.2□□□□□ -0.46
NR1H3-229ENST00000527464 AMTNQ6UX39 209 aa12.2□□□□□ -0.46
NR1H3-229ENST00000527464 THAP6Q8TBB0 222 aa12.2□□□□□ -0.46
NR1H3-229ENST00000527464 PHLDA1Q8WV24 401 aaPredicted RBP12.2□□□□□ -0.46
NR1H3-229ENST00000527464 ATP5SQ99766 215 aa12.2□□□□□ -0.46
NR1H3-229ENST00000527464 SLC35B3Q9H1N7 401 aa12.2□□□□□ -0.46
NR1H3-229ENST00000527464 MED28Q9H204 178 aa12.2□□□□□ -0.46
NR1H3-229ENST00000527464 TMEM14CQ9P0S9 112 aa12.2□□□□□ -0.46
NR1H3-229ENST00000527464 MBD2Q9UBB5 411 aa12.2□□□□□ -0.46
NR1H3-229ENST00000527464 RYR2Q92736 4967 aa12.2□□□□□ -0.46
NR1H3-229ENST00000527464 PLECQ15149 4684 aaKnown RBP12.19□□□□□ -0.46
NR1H3-229ENST00000527464 C17orf112F2Z3M2 114 aa12.19□□□□□ -0.46
NR1H3-229ENST00000527464 ZNF253O75346 499 aa12.19□□□□□ -0.46
NR1H3-229ENST00000527464 FXYD7P58549 80 aa12.19□□□□□ -0.46
NR1H3-229ENST00000527464 OR8A1Q8NGG7 326 aa12.19□□□□□ -0.46
NR1H3-229ENST00000527464 RPUSD4Q96CM3 377 aaKnown RBP12.19□□□□□ -0.46
NR1H3-229ENST00000527464 GOLT1BQ9Y3E0 138 aa12.19□□□□□ -0.46
NR1H3-229ENST00000527464 TRAV5A0A0B4J249 113 aa12.18□□□□□ -0.46
NR1H3-229ENST00000527464 TMEM189A5PLL7 270 aa12.18□□□□□ -0.46
NR1H3-229ENST00000527464 NANOS2P60321 138 aaKnown RBP12.18□□□□□ -0.46
NR1H3-229ENST00000527464 OR11H7Q8NGC8 314 aa12.18□□□□□ -0.46
NR1H3-229ENST00000527464 ASB13Q8WXK3 278 aa12.18□□□□□ -0.46
NR1H3-229ENST00000527464 SAT2Q96F10 170 aaPredicted RBP12.18□□□□□ -0.46
NR1H3-229ENST00000527464 IGF2BP2-AS1Q96M15 143 aa12.18□□□□□ -0.46
NR1H3-229ENST00000527464 C11orf94C9JXX5 98 aa12.17□□□□□ -0.46
NR1H3-229ENST00000527464 H3BQ15 152 aa12.17□□□□□ -0.46
NR1H3-229ENST00000527464 IFNA5P01569 189 aa12.17□□□□□ -0.46
NR1H3-229ENST00000527464 HLA-DMBP28068 263 aa12.17□□□□□ -0.46
NR1H3-229ENST00000527464 HIST1H1AQ02539 215 aaPredicted RBP12.17□□□□□ -0.46
NR1H3-229ENST00000527464 PARD6GQ9BYG4 376 aaPredicted RBP12.17□□□□□ -0.46
NR1H3-229ENST00000527464 RFNGQ9Y644 331 aa12.17□□□□□ -0.46
NR1H3-229ENST00000527464 SLC17A3O00476 420 aa12.16□□□□□ -0.46
NR1H3-229ENST00000527464 HIST1H1EP10412 219 aaKnown RBP12.16□□□□□ -0.46
NR1H3-229ENST00000527464 PDE6HQ13956 83 aa12.16□□□□□ -0.46
NR1H3-229ENST00000527464 FCN2Q15485 313 aa12.16□□□□□ -0.46
NR1H3-229ENST00000527464 RGS21Q2M5E4 152 aa12.16□□□□□ -0.46
NR1H3-229ENST00000527464 C1orf158Q8N1D5 194 aa12.16□□□□□ -0.46
NR1H3-229ENST00000527464 SCGB1C1Q8TD33 95 aa12.16□□□□□ -0.46
NR1H3-229ENST00000527464 MRPL32Q9BYC8 188 aaKnown RBP12.16□□□□□ -0.46
NR1H3-229ENST00000527464 ALMS1Q8TCU4 4167 aa12.15□□□□□ -0.46
NR1H3-229ENST00000527464 DNAH1Q9P2D7 4330 aa12.15□□□□□ -0.46
NR1H3-229ENST00000527464 TRBV19A0A075B6N1 114 aa12.15□□□□□ -0.46
NR1H3-229ENST00000527464 BOLA2-SMG1P6H3BVE0 249 aa12.15□□□□□ -0.46
NR1H3-229ENST00000527464 INSP01308 110 aa12.15□□□□□ -0.46
NR1H3-229ENST00000527464 SNRPCP09234 159 aaKnown RBP12.15□□□□□ -0.46
NR1H3-229ENST00000527464 RHOBP62745 196 aa12.15□□□□□ -0.46
NR1H3-229ENST00000527464 GCSAMLQ5JQS6 135 aa12.15□□□□□ -0.46
NR1H3-229ENST00000527464 PPP1R14DQ9NXH3 145 aa12.15□□□□□ -0.46
NR1H3-229ENST00000527464 ZNF586Q9NXT0 402 aa12.15□□□□□ -0.46
NR1H3-229ENST00000527464 IGHV3OR16-12A0A075B7B8 117 aa12.14□□□□□ -0.47
NR1H3-229ENST00000527464 H3BTX0 84 aa12.14□□□□□ -0.47
NR1H3-229ENST00000527464 HBE1P02100 147 aa12.14□□□□□ -0.47
NR1H3-229ENST00000527464 GIPP09681 153 aaPredicted RBP12.14□□□□□ -0.47
NR1H3-229ENST00000527464 SPINK13Q1W4C9 94 aa12.14□□□□□ -0.47
NR1H3-229ENST00000527464 OR10J6PQ8NGY7 276 aa12.14□□□□□ -0.47
NR1H3-229ENST00000527464 MRPL53Q96EL3 112 aaKnown RBP12.14□□□□□ -0.47
NR1H3-229ENST00000527464 PRELID1Q9Y255 219 aa12.14□□□□□ -0.47
NR1H3-229ENST00000527464 TEX48A0A1B0GUV7 120 aa12.13□□□□□ -0.47
NR1H3-229ENST00000527464 M0R2Z0 102 aa12.13□□□□□ -0.47
NR1H3-229ENST00000527464 CRXO43186 299 aaPredicted RBP12.13□□□□□ -0.47
NR1H3-229ENST00000527464 TCTAP57738 103 aa12.13□□□□□ -0.47
NR1H3-229ENST00000527464 RRN3P1Q2M238 152 aa12.13□□□□□ -0.47
NR1H3-229ENST00000527464 FAM167A-AS1Q96KT0 104 aa12.13□□□□□ -0.47
NR1H3-229ENST00000527464 TMEM208Q9BTX3 173 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms