RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 IGKV2D-26A0A0A0MRZ7 120 aa4.62□□□□□ -1.67
CD44-225ENST00000527326 TRGV8A0A0C4DH27 118 aa4.62□□□□□ -1.67
CD44-225ENST00000527326 NCBP2LA6PVI3 153 aaKnown RBP4.62□□□□□ -1.67
CD44-225ENST00000527326 SRRM4A7MD48 611 aaKnown RBP4.62□□□□□ -1.67
CD44-225ENST00000527326 OOSP1A8MZH6 123 aa4.62□□□□□ -1.67
CD44-225ENST00000527326 H0YGG7 62 aa4.62□□□□□ -1.67
CD44-225ENST00000527326 H3BVH4 76 aa4.62□□□□□ -1.67
CD44-225ENST00000527326 KLK10O43240 276 aa4.62□□□□□ -1.67
CD44-225ENST00000527326 SLC25A20O43772 301 aa4.62□□□□□ -1.67
CD44-225ENST00000527326 IGLV2-14P01704 120 aa4.62□□□□□ -1.67
CD44-225ENST00000527326 COX7CP15954 63 aa4.62□□□□□ -1.67
CD44-225ENST00000527326 UBE2D1P51668 147 aa4.62□□□□□ -1.67
CD44-225ENST00000527326 ZNF137PP52743 207 aa4.62□□□□□ -1.67
CD44-225ENST00000527326 ZNF415Q09FC8 603 aa4.62□□□□□ -1.67
CD44-225ENST00000527326 CCL14Q16627 93 aa4.62□□□□□ -1.67
CD44-225ENST00000527326 ZNF493Q6ZR52 646 aa4.62□□□□□ -1.67
CD44-225ENST00000527326 AMN1Q8IY45 258 aa4.62□□□□□ -1.67
CD44-225ENST00000527326 SSMEM1Q8WWF3 244 aa4.62□□□□□ -1.67
CD44-225ENST00000527326 TSACCQ96A04 125 aaPredicted RBP4.62□□□□□ -1.67
CD44-225ENST00000527326 ELSPBP1Q96BH3 223 aa4.62□□□□□ -1.67
CD44-225ENST00000527326 RNF125Q96EQ8 232 aa4.62□□□□□ -1.67
CD44-225ENST00000527326 MMABQ96EY8 250 aaPredicted RBP4.62□□□□□ -1.67
CD44-225ENST00000527326 HHLA3Q9XRX5 114 aa4.62□□□□□ -1.67
CD44-225ENST00000527326 Q9Y3F1 56 aa4.62□□□□□ -1.67
CD44-225ENST00000527326 PTPRSQ13332 1948 aa4.62□□□□□ -1.67
CD44-225ENST00000527326 ADAMTS9Q9P2N4 1935 aa4.62□□□□□ -1.67
CD44-225ENST00000527326 IGHV3OR15-7A0A075B7D8 119 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 A0A1B0GUT8 65 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 WI2-2373I1.2A0A1W2PRP0 233 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 C5orf63A6NC05 138 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 C19orf71A6NCJ1 209 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 LINC01549A6NIU2 74 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 TIMM23O14925 209 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 TCL1BO95988 128 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 TRACP01848 142 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 CLPSP04118 112 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 CD7P09564 240 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 HLA-DMBP28068 263 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 FCER1GP30273 86 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 CDAP32320 146 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 UBE2L3P68036 154 aaKnown RBP4.61□□□□□ -1.67
CD44-225ENST00000527326 CD69Q07108 199 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 EBI3Q14213 229 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 DAZAP2Q15038 168 aaPredicted RBP4.61□□□□□ -1.67
CD44-225ENST00000527326 CLLU1OSQ5K130 101 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 TMEM170BQ5T4T1 132 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 SIGLEC15Q6ZMC9 328 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 Q71RC1 249 aaPredicted RBP4.61□□□□□ -1.67
CD44-225ENST00000527326 ZNF329Q86UD4 541 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 MKXQ8IYA7 352 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 DRAM1Q8N682 238 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 RFESDQ8TAC1 157 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.61□□□□□ -1.67
CD44-225ENST00000527326 ZNF503Q96F45 646 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 FMC1Q96HJ9 113 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 NABP2Q9BQ15 211 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 MRPL20Q9BYC9 149 aaKnown RBP4.61□□□□□ -1.67
CD44-225ENST00000527326 DKK2Q9UBU2 259 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 TDRD6O60522 2096 aaKnown RBP4.61□□□□□ -1.67
CD44-225ENST00000527326 FREM3P0C091 2139 aa4.61□□□□□ -1.67
CD44-225ENST00000527326 MPDZO75970 2070 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 GTF3C1Q12789 2109 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 MUC6Q6W4X9 2439 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 RBAKDNA6NC62 111 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 LINC01546A6NGU7 62 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 H3BMM0 161 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 LGALS9O00182 355 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 ACYP1P07311 99 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 IFI27P40305 119 aaPredicted RBP4.6□□□□□ -1.67
CD44-225ENST00000527326 CXCL5P42830 114 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 PAX8Q06710 450 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 EIF4EBP1Q13541 118 aaPredicted RBP4.6□□□□□ -1.67
CD44-225ENST00000527326 C10orf128Q5T292 105 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 ZC2HC1BQ5TFG8 222 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 HRCT1Q6UXD1 115 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 GTSCR1Q86UQ5 136 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 DTX2Q86UW9 622 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 C11orf53Q8IXP5 236 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 ORMDL3Q8N138 153 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 POM121L12Q8N7R1 296 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 C3orf56Q8N813 242 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 RNF152Q8N8N0 203 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 FLVCR1-AS1Q8TAF5 88 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 RNF138Q8WVD3 245 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 UBE2WQ96B02 151 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 DPH3Q96FX2 82 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 EMC6Q9BV81 110 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 AAMDCQ9H7C9 122 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 PHPT1Q9NRX4 125 aaPredicted RBP4.6□□□□□ -1.67
CD44-225ENST00000527326 RALGAPA1Q6GYQ0 2036 aa4.6□□□□□ -1.67
CD44-225ENST00000527326 TMSB15BA0A087X1C1 80 aa4.59□□□□□ -1.67
CD44-225ENST00000527326 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.59□□□□□ -1.67
CD44-225ENST00000527326 A0A0J9YW62 118 aa4.59□□□□□ -1.67
CD44-225ENST00000527326 TRBV6-1A0A0K0K1D8 114 aa4.59□□□□□ -1.67
CD44-225ENST00000527326 FAM236AA0A1B0GUQ0 79 aa4.59□□□□□ -1.67
CD44-225ENST00000527326 FAM236BA0A1B0GV22 79 aa4.59□□□□□ -1.67
CD44-225ENST00000527326 K7ENP7 123 aa4.59□□□□□ -1.67
CD44-225ENST00000527326 OVOL1O14753 267 aa4.59□□□□□ -1.67
CD44-225ENST00000527326 P0DMU3 169 aa4.59□□□□□ -1.67
CD44-225ENST00000527326 FAM231AP0DMU4 169 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms