RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 ZNF492Q9P255 531 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 NBPF19A0A087WUL8 3843 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 C16orf97H3BN30 126 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 CRXO43186 299 aaPredicted RBP9.98□□□□□ -0.81
CAPN1-208ENST00000527323 CT83Q5H943 113 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 BVES-AS1Q5T3Y7 98 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 C12orf54Q6X4T0 127 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 EXOC3-AS1Q8N2X6 119 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 HSPB8Q9UJY1 196 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 HIGD1AQ9Y241 93 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 CSPG4Q6UVK1 2322 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 DOPEY1Q5JWR5 2465 aa9.97□□□□□ -0.81
CAPN1-208ENST00000527323 OR2T8A6NH00 312 aa9.97□□□□□ -0.81
CAPN1-208ENST00000527323 SNAI2O43623 268 aa9.97□□□□□ -0.81
CAPN1-208ENST00000527323 LYPD2Q6UXB3 125 aa9.97□□□□□ -0.81
CAPN1-208ENST00000527323 C8orf46Q8TAG6 207 aa9.97□□□□□ -0.81
CAPN1-208ENST00000527323 SRSF12Q8WXF0 261 aaKnown RBP9.97□□□□□ -0.81
CAPN1-208ENST00000527323 ASCL2Q99929 193 aa9.97□□□□□ -0.81
CAPN1-208ENST00000527323 NDFIP1Q9BT67 221 aa9.97□□□□□ -0.81
CAPN1-208ENST00000527323 TENM4Q6N022 2769 aa9.97□□□□□ -0.81
CAPN1-208ENST00000527323 HECTD1Q9ULT8 2610 aa9.97□□□□□ -0.81
CAPN1-208ENST00000527323 A0A087X0K7 114 aa9.97□□□□□ -0.81
CAPN1-208ENST00000527323 TAX1BP3O14907 124 aa9.97□□□□□ -0.81
CAPN1-208ENST00000527323 THBDP07204 575 aa9.97□□□□□ -0.81
CAPN1-208ENST00000527323 MC5RP33032 325 aa9.97□□□□□ -0.81
CAPN1-208ENST00000527323 PRB3Q04118 309 aaPredicted RBP9.97□□□□□ -0.81
CAPN1-208ENST00000527323 AMMECR1LQ6DCA0 310 aa9.97□□□□□ -0.81
CAPN1-208ENST00000527323 PET117Q6UWS5 81 aa9.97□□□□□ -0.81
CAPN1-208ENST00000527323 PRORYQ9H606 182 aa9.97□□□□□ -0.81
CAPN1-208ENST00000527323 RAI1Q7Z5J4 1906 aaPredicted RBP9.97□□□□□ -0.81
CAPN1-208ENST00000527323 HLA-DRB1P01911 266 aa9.96□□□□□ -0.81
CAPN1-208ENST00000527323 RBP4P02753 201 aa9.96□□□□□ -0.81
CAPN1-208ENST00000527323 GP9P14770 177 aa9.96□□□□□ -0.81
CAPN1-208ENST00000527323 PRSS3P2Q8NHM4 247 aa9.96□□□□□ -0.81
CAPN1-208ENST00000527323 GFRA4Q9GZZ7 299 aa9.96□□□□□ -0.81
CAPN1-208ENST00000527323 C17orf100A8MU93 164 aa9.96□□□□□ -0.82
CAPN1-208ENST00000527323 LYNX1G3V0Z9 82 aa9.96□□□□□ -0.82
CAPN1-208ENST00000527323 LYNX1P0DP58 116 aa9.96□□□□□ -0.82
CAPN1-208ENST00000527323 LGALS7P47929 136 aa9.96□□□□□ -0.82
CAPN1-208ENST00000527323 RBPJQ06330 500 aa9.96□□□□□ -0.82
CAPN1-208ENST00000527323 TMEM108Q6UXF1 575 aa9.96□□□□□ -0.82
CAPN1-208ENST00000527323 C1RLQ9NZP8 487 aa9.96□□□□□ -0.82
CAPN1-208ENST00000527323 APOHP02749 345 aaPredicted RBP9.96□□□□□ -0.82
CAPN1-208ENST00000527323 CNTFRP26992 372 aa9.96□□□□□ -0.82
CAPN1-208ENST00000527323 CDKN1BP46527 198 aa9.96□□□□□ -0.82
CAPN1-208ENST00000527323 ADORA2A-AS1P86434 159 aa9.96□□□□□ -0.82
CAPN1-208ENST00000527323 VPS25Q9BRG1 176 aa9.96□□□□□ -0.82
CAPN1-208ENST00000527323 PSG1P11464 419 aa9.95□□□□□ -0.82
CAPN1-208ENST00000527323 ARF6P62330 175 aa9.95□□□□□ -0.82
CAPN1-208ENST00000527323 C3orf36Q3SXR2 165 aa9.95□□□□□ -0.82
CAPN1-208ENST00000527323 SAPCD1Q5SSQ6 148 aa9.95□□□□□ -0.82
CAPN1-208ENST00000527323 LDLRAD2Q5SZI1 272 aa9.95□□□□□ -0.82
CAPN1-208ENST00000527323 FA2HQ7L5A8 372 aa9.95□□□□□ -0.82
CAPN1-208ENST00000527323 Q86TA4 180 aa9.95□□□□□ -0.82
CAPN1-208ENST00000527323 OTORQ9NRC9 128 aa9.95□□□□□ -0.82
CAPN1-208ENST00000527323 AP5S1Q9NUS5 200 aa9.95□□□□□ -0.82
CAPN1-208ENST00000527323 MALRD1Q5VYJ5 2156 aa9.95□□□□□ -0.82
CAPN1-208ENST00000527323 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.95□□□□□ -0.822e-8■■■□□ 16.5
CAPN1-208ENST00000527323 A0A1B0GUT8 65 aa9.95□□□□□ -0.82
CAPN1-208ENST00000527323 FCN3O75636 299 aa9.95□□□□□ -0.82
CAPN1-208ENST00000527323 CRYGCP07315 174 aa9.95□□□□□ -0.82
CAPN1-208ENST00000527323 DLX1P56177 255 aa9.95□□□□□ -0.82
CAPN1-208ENST00000527323 COTL1Q14019 142 aa9.95□□□□□ -0.82
CAPN1-208ENST00000527323 TMEM116Q8NCL8 245 aa9.95□□□□□ -0.82
CAPN1-208ENST00000527323 PF4P02776 101 aa9.94□□□□□ -0.82
CAPN1-208ENST00000527323 RIGQ13278 110 aa9.94□□□□□ -0.82
CAPN1-208ENST00000527323 Q71RC1 249 aaPredicted RBP9.94□□□□□ -0.82
CAPN1-208ENST00000527323 DEFB125Q8N687 156 aa9.94□□□□□ -0.82
CAPN1-208ENST00000527323 SCRT2Q9NQ03 307 aa9.94□□□□□ -0.82
CAPN1-208ENST00000527323 SERTM2A0A1B0GWG4 89 aa9.94□□□□□ -0.82
CAPN1-208ENST00000527323 FAM231BA6NCW3 169 aa9.94□□□□□ -0.82
CAPN1-208ENST00000527323 HAX1O00165 279 aa9.94□□□□□ -0.82
CAPN1-208ENST00000527323 ARMS2P0C7Q2 107 aa9.94□□□□□ -0.82
CAPN1-208ENST00000527323 TMEM178BH3BS89 294 aa9.93□□□□□ -0.82
CAPN1-208ENST00000527323 GPR183P32249 361 aa9.93□□□□□ -0.82
CAPN1-208ENST00000527323 ADIPOQQ15848 244 aa9.93□□□□□ -0.82
CAPN1-208ENST00000527323 SLC25A39Q9BZJ4 359 aaPredicted RBP9.93□□□□□ -0.82
CAPN1-208ENST00000527323 MS4A6AQ9H2W1 248 aa9.93□□□□□ -0.82
CAPN1-208ENST00000527323 PLGLAQ15195 96 aa9.93□□□□□ -0.82
CAPN1-208ENST00000527323 FAM71F2Q6NXP2 309 aa9.93□□□□□ -0.82
CAPN1-208ENST00000527323 LINC00311Q8N616 119 aa9.93□□□□□ -0.82
CAPN1-208ENST00000527323 TEX45Q8NA69 505 aa9.93□□□□□ -0.82
CAPN1-208ENST00000527323 NEU4Q8WWR8 484 aaPredicted RBP9.93□□□□□ -0.82
CAPN1-208ENST00000527323 RASL11BQ9BPW5 248 aa9.93□□□□□ -0.82
CAPN1-208ENST00000527323 LOC389332A0A1B0GUA5 103 aa9.93□□□□□ -0.82
CAPN1-208ENST00000527323 CSN1S1P47710 185 aa9.93□□□□□ -0.82
CAPN1-208ENST00000527323 TCTAP57738 103 aa9.93□□□□□ -0.82
CAPN1-208ENST00000527323 HIST1H1AQ02539 215 aaPredicted RBP9.93□□□□□ -0.82
CAPN1-208ENST00000527323 BPIFA4PQ86YQ2 179 aa9.93□□□□□ -0.82
CAPN1-208ENST00000527323 OR8A1Q8NGG7 326 aa9.93□□□□□ -0.82
CAPN1-208ENST00000527323 INSIG2Q9Y5U4 225 aa9.93□□□□□ -0.82
CAPN1-208ENST00000527323 FBN2P35556 2912 aa9.93□□□□□ -0.82
CAPN1-208ENST00000527323 CST9LQ9H4G1 147 aa9.92□□□□□ -0.82
CAPN1-208ENST00000527323 CD5LO43866 347 aa9.92□□□□□ -0.82
CAPN1-208ENST00000527323 IGHV1-8P0DP01 117 aa9.92□□□□□ -0.82
CAPN1-208ENST00000527323 PSG9Q00887 426 aa9.92□□□□□ -0.82
CAPN1-208ENST00000527323 MRGPRG-AS1Q2M3A8 158 aa9.92□□□□□ -0.82
CAPN1-208ENST00000527323 NUP37Q8NFH4 326 aa9.92□□□□□ -0.82
CAPN1-208ENST00000527323 C17orf77Q96MU5 243 aa9.92□□□□□ -0.82
CAPN1-208ENST00000527323 CTSZQ9UBR2 303 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms