RNA–Protein interactions for RNA: ENST00000527013.5

CHEK1-209, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-209ENST00000527013 TTC32Q5I0X7 151 aa11.19□□□□□ -0.62
CHEK1-209ENST00000527013 S100A7AQ86SG5 101 aa11.19□□□□□ -0.62
CHEK1-209ENST00000527013 C20orf144Q9BQM9 153 aa11.19□□□□□ -0.62
CHEK1-209ENST00000527013 Q9H3A6 140 aa11.19□□□□□ -0.62
CHEK1-209ENST00000527013 H3BP45 60 aa11.18□□□□□ -0.62
CHEK1-209ENST00000527013 H7BYZ3 331 aa11.18□□□□□ -0.62
CHEK1-209ENST00000527013 K7EPK0 472 aa11.18□□□□□ -0.62
CHEK1-209ENST00000527013 MRPS12O15235 138 aaKnown RBP11.18□□□□□ -0.62
CHEK1-209ENST00000527013 HOXB5P09067 269 aa11.18□□□□□ -0.62
CHEK1-209ENST00000527013 LINC00869P0C866 280 aa11.18□□□□□ -0.62
CHEK1-209ENST00000527013 CXCL2P19875 107 aa11.18□□□□□ -0.62
CHEK1-209ENST00000527013 BTF3P20290 206 aaKnown RBP11.18□□□□□ -0.62
CHEK1-209ENST00000527013 SPATA12Q7Z6I5 190 aa11.18□□□□□ -0.62
CHEK1-209ENST00000527013 TOMM5Q8N4H5 51 aa11.18□□□□□ -0.62
CHEK1-209ENST00000527013 OR10J6PQ8NGY7 276 aa11.18□□□□□ -0.62
CHEK1-209ENST00000527013 UHRF2Q96PU4 802 aa11.18□□□□□ -0.62
CHEK1-209ENST00000527013 UPK3BQ9BT76 320 aa11.18□□□□□ -0.62
CHEK1-209ENST00000527013 KRTAP1-5Q9BYS1 174 aa11.18□□□□□ -0.62
CHEK1-209ENST00000527013 NOP10Q9NPE3 64 aaKnown RBP11.18□□□□□ -0.62
CHEK1-209ENST00000527013 PPP1R14DQ9NXH3 145 aa11.18□□□□□ -0.62
CHEK1-209ENST00000527013 RNF24Q9Y225 148 aa11.18□□□□□ -0.62
CHEK1-209ENST00000527013 FNDC10F2Z333 226 aa11.17□□□□□ -0.62
CHEK1-209ENST00000527013 H3BNG1 76 aa11.17□□□□□ -0.62
CHEK1-209ENST00000527013 OR5G3P0C626 314 aa11.17□□□□□ -0.62
CHEK1-209ENST00000527013 HTN1P15515 57 aa11.17□□□□□ -0.62
CHEK1-209ENST00000527013 C4orf46Q504U0 113 aa11.17□□□□□ -0.62
CHEK1-209ENST00000527013 RXFP4Q8TDU9 374 aa11.17□□□□□ -0.62
CHEK1-209ENST00000527013 RPUSD4Q96CM3 377 aaKnown RBP11.17□□□□□ -0.62
CHEK1-209ENST00000527013 A0A1W2PPQ1 181 aa11.16□□□□□ -0.62
CHEK1-209ENST00000527013 SMCO3A2RU48 225 aa11.16□□□□□ -0.62
CHEK1-209ENST00000527013 ADAP1O75689 374 aa11.16□□□□□ -0.62
CHEK1-209ENST00000527013 M6PRP20645 277 aa11.16□□□□□ -0.62
CHEK1-209ENST00000527013 UBE2MP61081 183 aaKnown RBP11.16□□□□□ -0.62
CHEK1-209ENST00000527013 DLK1P80370 383 aa11.16□□□□□ -0.62
CHEK1-209ENST00000527013 PATE2Q6UY27 113 aa11.16□□□□□ -0.62
CHEK1-209ENST00000527013 LRRC20Q8TCA0 184 aa11.16□□□□□ -0.62
CHEK1-209ENST00000527013 GNPNAT1Q96EK6 184 aaPredicted RBP11.16□□□□□ -0.62
CHEK1-209ENST00000527013 ZNF331Q9NQX6 463 aaPredicted RBP11.16□□□□□ -0.62
CHEK1-209ENST00000527013 TRAV26-1A0A087WT03 109 aa11.15□□□□□ -0.62
CHEK1-209ENST00000527013 ZNF701M0R085 212 aaPredicted RBP11.15□□□□□ -0.62
CHEK1-209ENST00000527013 POLR2GP62487 172 aaKnown RBP eCLIP11.15□□□□□ -0.62
CHEK1-209ENST00000527013 PXDC1Q5TGL8 231 aa11.15□□□□□ -0.62
CHEK1-209ENST00000527013 LCN15Q6UWW0 184 aa11.15□□□□□ -0.62
CHEK1-209ENST00000527013 MCFD2Q8NI22 146 aa11.15□□□□□ -0.62
CHEK1-209ENST00000527013 SMIM8Q96KF7 97 aa11.15□□□□□ -0.62
CHEK1-209ENST00000527013 SLC50A1Q9BRV3 221 aa11.15□□□□□ -0.62
CHEK1-209ENST00000527013 NPVFQ9HCQ7 196 aa11.15□□□□□ -0.62
CHEK1-209ENST00000527013 SCRT2Q9NQ03 307 aa11.15□□□□□ -0.62
CHEK1-209ENST00000527013 PSENENQ9NZ42 101 aa11.15□□□□□ -0.62
CHEK1-209ENST00000527013 HOXA5P20719 270 aa11.14□□□□□ -0.63
CHEK1-209ENST00000527013 OR5I1Q13606 314 aa11.14□□□□□ -0.63
CHEK1-209ENST00000527013 TMEM14EPQ6UXP3 125 aa11.14□□□□□ -0.63
CHEK1-209ENST00000527013 ARL6Q9H0F7 186 aa11.14□□□□□ -0.63
CHEK1-209ENST00000527013 ARV1Q9H2C2 271 aa11.14□□□□□ -0.63
CHEK1-209ENST00000527013 V9GYH0 126 aa11.14□□□□□ -0.63
CHEK1-209ENST00000527013 DNAH5Q8TE73 4624 aa11.13□□□□□ -0.63
CHEK1-209ENST00000527013 H3BMQ9 156 aa11.13□□□□□ -0.63
CHEK1-209ENST00000527013 KRTAP10-2P60368 255 aa11.13□□□□□ -0.63
CHEK1-209ENST00000527013 KIR3DS1Q14943 382 aa11.13□□□□□ -0.63
CHEK1-209ENST00000527013 ESRGQ1W209 222 aa11.13□□□□□ -0.63
CHEK1-209ENST00000527013 PYDC2Q56P42 97 aa11.13□□□□□ -0.63
CHEK1-209ENST00000527013 TEPPQ6URK8 271 aa11.13□□□□□ -0.63
CHEK1-209ENST00000527013 MRPS16Q9Y3D3 137 aaKnown RBP11.13□□□□□ -0.63
CHEK1-209ENST00000527013 C9orf170A2RU37 121 aa11.12□□□□□ -0.63
CHEK1-209ENST00000527013 CCNKO75909 580 aa11.12□□□□□ -0.63
CHEK1-209ENST00000527013 ANXA7P20073 488 aaKnown RBP11.12□□□□□ -0.63
CHEK1-209ENST00000527013 GFI1BQ5VTD9 330 aa11.12□□□□□ -0.63
CHEK1-209ENST00000527013 CCDC190Q86UF4 302 aa11.12□□□□□ -0.63
CHEK1-209ENST00000527013 CCDC28AQ8IWP9 274 aa11.12□□□□□ -0.63
CHEK1-209ENST00000527013 OR10P1Q8NGE3 313 aa11.12□□□□□ -0.63
CHEK1-209ENST00000527013 A0A0J9YY99 117 aa11.11□□□□□ -0.63
CHEK1-209ENST00000527013 SSSCA1O60232 199 aa11.11□□□□□ -0.63
CHEK1-209ENST00000527013 RLN2P04090 185 aa11.11□□□□□ -0.63
CHEK1-209ENST00000527013 TAS2R30P59541 319 aa11.11□□□□□ -0.63
CHEK1-209ENST00000527013 RRAS2P62070 204 aaPredicted RBP11.11□□□□□ -0.63
CHEK1-209ENST00000527013 LINC00305Q7Z4B0 112 aa11.11□□□□□ -0.63
CHEK1-209ENST00000527013 ZNF546Q86UE3 836 aa11.11□□□□□ -0.63
CHEK1-209ENST00000527013 BPIFA4PQ86YQ2 179 aa11.11□□□□□ -0.63
CHEK1-209ENST00000527013 ZBTB8BQ8NAP8 495 aaPredicted RBP11.11□□□□□ -0.63
CHEK1-209ENST00000527013 ODF3Q96PU9 254 aa11.11□□□□□ -0.63
CHEK1-209ENST00000527013 GAGE12BA1L429 117 aa11.1□□□□□ -0.63
CHEK1-209ENST00000527013 TSC22D2O75157 780 aa11.1□□□□□ -0.63
CHEK1-209ENST00000527013 GAGE7O76087 117 aa11.1□□□□□ -0.63
CHEK1-209ENST00000527013 METTL15P1P0C7V9 234 aa11.1□□□□□ -0.63
CHEK1-209ENST00000527013 GAGE12FP0CL80 117 aa11.1□□□□□ -0.63
CHEK1-209ENST00000527013 GAGE12GP0CL81 117 aa11.1□□□□□ -0.63
CHEK1-209ENST00000527013 GAGE12IP0CL82 117 aa11.1□□□□□ -0.63
CHEK1-209ENST00000527013 PRB4P10163 310 aaPredicted RBP11.1□□□□□ -0.63
CHEK1-209ENST00000527013 SLC38A11Q08AI6 406 aa11.1□□□□□ -0.63
CHEK1-209ENST00000527013 DAZ2Q13117 558 aaKnown RBP11.1□□□□□ -0.63
CHEK1-209ENST00000527013 SAT2Q96F10 170 aaPredicted RBP11.1□□□□□ -0.63
CHEK1-209ENST00000527013 C18orf15Q96N68 181 aa11.1□□□□□ -0.63
CHEK1-209ENST00000527013 PARD6GQ9BYG4 376 aaPredicted RBP11.1□□□□□ -0.63
CHEK1-209ENST00000527013 MGAT4CQ9UBM8 478 aa11.1□□□□□ -0.63
CHEK1-209ENST00000527013 SNURFLB1AK76 121 aa11.09□□□□□ -0.63
CHEK1-209ENST00000527013 PRAC2D3DTV9 90 aa11.09□□□□□ -0.63
CHEK1-209ENST00000527013 SLC17A3O00476 420 aa11.09□□□□□ -0.63
CHEK1-209ENST00000527013 GOSR2O14653 212 aa11.09□□□□□ -0.63
CHEK1-209ENST00000527013 NOL3O60936 208 aaKnown RBP11.09□□□□□ -0.63
CHEK1-209ENST00000527013 IGLC2P0DOY2 106 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms