RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 RFNGQ9Y644 331 aa10.04□□□□□ -0.8
CPSF1-201ENST00000526271 IGKV1OR2-108A0A075B7D4 117 aa10.03□□□□□ -0.8
CPSF1-201ENST00000526271 PLAC8L1A1L4L8 177 aa10.03□□□□□ -0.8
CPSF1-201ENST00000526271 HTN3P15516 51 aa10.03□□□□□ -0.8
CPSF1-201ENST00000526271 SULT1A1P50225 295 aa10.03□□□□□ -0.8
CPSF1-201ENST00000526271 NUTF2P61970 127 aaKnown RBP10.03□□□□□ -0.8
CPSF1-201ENST00000526271 GAMTQ14353 236 aa10.03□□□□□ -0.8
CPSF1-201ENST00000526271 C1orf134Q5TEV5 83 aa10.03□□□□□ -0.8
CPSF1-201ENST00000526271 UBE2DNLQ8IWF7 75 aa10.03□□□□□ -0.8
CPSF1-201ENST00000526271 OR10P1Q8NGE3 313 aa10.03□□□□□ -0.8
CPSF1-201ENST00000526271 FAM210BQ96KR6 192 aa10.03□□□□□ -0.8
CPSF1-201ENST00000526271 GGACTQ9BVM4 153 aa10.03□□□□□ -0.8
CPSF1-201ENST00000526271 SLC25A31Q9H0C2 315 aa10.03□□□□□ -0.8
CPSF1-201ENST00000526271 PAIP2BQ9ULR5 123 aaKnown RBP10.03□□□□□ -0.8
CPSF1-201ENST00000526271 TMEM189A5PLL7 270 aa10.02□□□□□ -0.81
CPSF1-201ENST00000526271 FNDC10F2Z333 226 aa10.02□□□□□ -0.81
CPSF1-201ENST00000526271 CRXO43186 299 aaPredicted RBP10.02□□□□□ -0.81
CPSF1-201ENST00000526271 NHLH2Q02577 135 aa10.02□□□□□ -0.81
CPSF1-201ENST00000526271 FAM78BQ5VT40 261 aa10.02□□□□□ -0.81
CPSF1-201ENST00000526271 OR8G2PQ6IF36 304 aa10.02□□□□□ -0.81
CPSF1-201ENST00000526271 TCTE3Q8IZS6 198 aa10.02□□□□□ -0.81
CPSF1-201ENST00000526271 ZNRF2Q8NHG8 242 aa10.02□□□□□ -0.81
CPSF1-201ENST00000526271 LINC00052Q96N35 136 aa10.02□□□□□ -0.81
CPSF1-201ENST00000526271 PFDN2Q9UHV9 154 aa10.02□□□□□ -0.81
CPSF1-201ENST00000526271 A0A0J9YX75 114 aa10.01□□□□□ -0.81
CPSF1-201ENST00000526271 LOC102723971A0A1B0GUV8 181 aa10.01□□□□□ -0.81
CPSF1-201ENST00000526271 SMLR1H3BR10 107 aa10.01□□□□□ -0.81
CPSF1-201ENST00000526271 CST7O76096 145 aa10.01□□□□□ -0.81
CPSF1-201ENST00000526271 RPL12P30050 165 aaKnown RBP10.01□□□□□ -0.81
CPSF1-201ENST00000526271 S100A11P31949 105 aa10.01□□□□□ -0.81
CPSF1-201ENST00000526271 PSMB3P49720 205 aa10.01□□□□□ -0.81
CPSF1-201ENST00000526271 DLK1P80370 383 aa10.01□□□□□ -0.81
CPSF1-201ENST00000526271 BAXQ07812 192 aa10.01□□□□□ -0.81
CPSF1-201ENST00000526271 OR4B1Q8NGF8 309 aa10.01□□□□□ -0.81
CPSF1-201ENST00000526271 CDK2AP2O75956 126 aa10□□□□□ -0.81
CPSF1-201ENST00000526271 NUP62P37198 522 aaPredicted RBP10□□□□□ -0.81
CPSF1-201ENST00000526271 PSG9Q00887 426 aa10□□□□□ -0.81
CPSF1-201ENST00000526271 ATP6V1FQ16864 119 aa10□□□□□ -0.81
CPSF1-201ENST00000526271 VWC2Q2TAL6 325 aa10□□□□□ -0.81
CPSF1-201ENST00000526271 TMEM182Q6ZP80 229 aaPredicted RBP10□□□□□ -0.81
CPSF1-201ENST00000526271 ZNF546Q86UE3 836 aa10□□□□□ -0.81
CPSF1-201ENST00000526271 AKAP14Q86UN6 197 aa10□□□□□ -0.81
CPSF1-201ENST00000526271 STX12Q86Y82 276 aa10□□□□□ -0.81
CPSF1-201ENST00000526271 OR11H4Q8NGC9 324 aa10□□□□□ -0.81
CPSF1-201ENST00000526271 SLC35E1Q96K37 410 aa10□□□□□ -0.81
CPSF1-201ENST00000526271 AQP10Q96PS8 301 aa10□□□□□ -0.81
CPSF1-201ENST00000526271 PBDC1Q9BVG4 233 aa10□□□□□ -0.81
CPSF1-201ENST00000526271 KRTAP1-5Q9BYS1 174 aa10□□□□□ -0.81
CPSF1-201ENST00000526271 NPVFQ9HCQ7 196 aa10□□□□□ -0.81
CPSF1-201ENST00000526271 TNFSF18Q9UNG2 199 aa10□□□□□ -0.81
CPSF1-201ENST00000526271 HSPB11Q9Y547 144 aa10□□□□□ -0.81
CPSF1-201ENST00000526271 TRAV8-2A0A0B4J237 113 aa9.99□□□□□ -0.81
CPSF1-201ENST00000526271 HMSDA8MTL9 139 aa9.99□□□□□ -0.81
CPSF1-201ENST00000526271 AZU1P20160 251 aa9.99□□□□□ -0.81
CPSF1-201ENST00000526271 HBG1P69891 147 aa9.99□□□□□ -0.81
CPSF1-201ENST00000526271 HBG2P69892 147 aa9.99□□□□□ -0.81
CPSF1-201ENST00000526271 SLC38A11Q08AI6 406 aa9.99□□□□□ -0.81
CPSF1-201ENST00000526271 OR2F1Q13607 317 aa9.99□□□□□ -0.81
CPSF1-201ENST00000526271 IGFL4Q6B9Z1 124 aa9.99□□□□□ -0.81
CPSF1-201ENST00000526271 ACOT7LQ6ZUV0 252 aa9.99□□□□□ -0.81
CPSF1-201ENST00000526271 TMEM144Q7Z5S9 345 aa9.99□□□□□ -0.81
CPSF1-201ENST00000526271 MAPKAPK5-AS1Q8N8E1 139 aa9.99□□□□□ -0.81
CPSF1-201ENST00000526271 THAP8Q8NA92 274 aa9.99□□□□□ -0.81
CPSF1-201ENST00000526271 RNF222A6NCQ9 220 aa9.98□□□□□ -0.81
CPSF1-201ENST00000526271 ZNF705GA8MUZ8 300 aaPredicted RBP9.98□□□□□ -0.81
CPSF1-201ENST00000526271 C16orf90A8MZG2 172 aa9.98□□□□□ -0.81
CPSF1-201ENST00000526271 FABP1P07148 127 aa9.98□□□□□ -0.81
CPSF1-201ENST00000526271 PRB4P10163 310 aaPredicted RBP9.98□□□□□ -0.81
CPSF1-201ENST00000526271 OR5C1Q8NGR4 320 aa9.98□□□□□ -0.81
CPSF1-201ENST00000526271 SLC25A32Q9H2D1 315 aa9.98□□□□□ -0.81
CPSF1-201ENST00000526271 FXYD6-FXYD2A0A087WZ82 144 aa9.97□□□□□ -0.81
CPSF1-201ENST00000526271 NBDYA0A0U1RRE5 68 aa9.97□□□□□ -0.81
CPSF1-201ENST00000526271 HBE1P02100 147 aa9.97□□□□□ -0.81
CPSF1-201ENST00000526271 C1QBP02746 253 aa9.97□□□□□ -0.81
CPSF1-201ENST00000526271 LYZP61626 148 aa9.97□□□□□ -0.81
CPSF1-201ENST00000526271 CD300CQ08708 224 aa9.97□□□□□ -0.81
CPSF1-201ENST00000526271 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.97□□□□□ -0.81
CPSF1-201ENST00000526271 INO80EQ8NBZ0 244 aaPredicted RBP9.97□□□□□ -0.81
CPSF1-201ENST00000526271 TRGV9Q99603 122 aa9.97□□□□□ -0.81
CPSF1-201ENST00000526271 UQCC1Q9NVA1 299 aa9.97□□□□□ -0.81
CPSF1-201ENST00000526271 LINC00588Q9Y4M8 146 aa9.97□□□□□ -0.81
CPSF1-201ENST00000526271 ZFP92A6NM28 416 aa9.96□□□□□ -0.82
CPSF1-201ENST00000526271 M0R2Z0 102 aa9.96□□□□□ -0.82
CPSF1-201ENST00000526271 ISLRO14498 428 aa9.96□□□□□ -0.82
CPSF1-201ENST00000526271 GATA2P23769 480 aaPredicted RBP9.96□□□□□ -0.82
CPSF1-201ENST00000526271 KRTAP10-2P60368 255 aa9.96□□□□□ -0.82
CPSF1-201ENST00000526271 DAD1P61803 113 aa9.96□□□□□ -0.82
CPSF1-201ENST00000526271 RRN3P1Q2M238 152 aa9.96□□□□□ -0.82
CPSF1-201ENST00000526271 C1orf194Q5T5A4 169 aa9.96□□□□□ -0.82
CPSF1-201ENST00000526271 IGF2BP2-AS1Q96M15 143 aa9.96□□□□□ -0.82
CPSF1-201ENST00000526271 TMEM147Q9BVK8 224 aa9.96□□□□□ -0.82
CPSF1-201ENST00000526271 GOLT1BQ9Y3E0 138 aa9.96□□□□□ -0.82
CPSF1-201ENST00000526271 MYCBP2O75592 4640 aa9.95□□□□□ -0.82
CPSF1-201ENST00000526271 TEX48A0A1B0GUV7 120 aa9.95□□□□□ -0.82
CPSF1-201ENST00000526271 SMCO3A2RU48 225 aa9.95□□□□□ -0.82
CPSF1-201ENST00000526271 ARPC5O15511 151 aa9.95□□□□□ -0.82
CPSF1-201ENST00000526271 CNN1P51911 297 aaKnown RBP9.95□□□□□ -0.82
CPSF1-201ENST00000526271 AKR1C1Q04828 323 aa9.95□□□□□ -0.82
CPSF1-201ENST00000526271 SPINK13Q1W4C9 94 aa9.95□□□□□ -0.82
CPSF1-201ENST00000526271 SOHLH1Q5JUK2 328 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms