RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 FOXI2Q6ZQN5 318 aa9.14□□□□□ -0.95
CCS-202ENST00000525435 Q6ZWC4 215 aa9.14□□□□□ -0.95
CCS-202ENST00000525435 STHQ8IWL8 128 aa9.14□□□□□ -0.95
CCS-202ENST00000525435 LINC00052Q96N35 136 aa9.14□□□□□ -0.95
CCS-202ENST00000525435 CSTL1Q9H114 145 aa9.14□□□□□ -0.95
CCS-202ENST00000525435 ZMAT4Q9H898 229 aa9.14□□□□□ -0.95
CCS-202ENST00000525435 CYTL1Q9NRR1 136 aa9.14□□□□□ -0.95
CCS-202ENST00000525435 hCG_2014768A0A024R1R8 64 aa9.13□□□□□ -0.95
CCS-202ENST00000525435 TRAV8-2A0A0B4J237 113 aa9.13□□□□□ -0.95
CCS-202ENST00000525435 KANTRA0A1W2PQU2 76 aa9.13□□□□□ -0.95
CCS-202ENST00000525435 H3BQ15 152 aa9.13□□□□□ -0.95
CCS-202ENST00000525435 TMEM41BQ5BJD5 291 aa9.13□□□□□ -0.95
CCS-202ENST00000525435 MORN3Q6PF18 240 aaPredicted RBP9.13□□□□□ -0.95
CCS-202ENST00000525435 MIR17HGQ75NE6 70 aa9.13□□□□□ -0.95
CCS-202ENST00000525435 OR10G4Q8NGN3 311 aa9.13□□□□□ -0.95
CCS-202ENST00000525435 OR10G9Q8NGN4 311 aa9.13□□□□□ -0.95
CCS-202ENST00000525435 OR10G7Q8NGN6 311 aa9.13□□□□□ -0.95
CCS-202ENST00000525435 SAT2Q96F10 170 aaPredicted RBP9.13□□□□□ -0.95
CCS-202ENST00000525435 SPATA25Q9BR10 227 aa9.13□□□□□ -0.95
CCS-202ENST00000525435 SLC25A2Q9BXI2 301 aa9.13□□□□□ -0.95
CCS-202ENST00000525435 OR51M1Q9H341 326 aa9.13□□□□□ -0.95
CCS-202ENST00000525435 SAV1Q9H4B6 383 aaPredicted RBP9.13□□□□□ -0.95
CCS-202ENST00000525435 ZNF331Q9NQX6 463 aaPredicted RBP9.13□□□□□ -0.95
CCS-202ENST00000525435 TRBV19A0A075B6N1 114 aa9.12□□□□□ -0.95
CCS-202ENST00000525435 H3BMM0 161 aa9.12□□□□□ -0.95
CCS-202ENST00000525435 BCL2L11O43521 198 aa9.12□□□□□ -0.95
CCS-202ENST00000525435 NBEAP1P0C6P0 100 aa9.12□□□□□ -0.95
CCS-202ENST00000525435 SPP1P10451 314 aa9.12□□□□□ -0.95
CCS-202ENST00000525435 HLA-DRB4P13762 266 aa9.12□□□□□ -0.95
CCS-202ENST00000525435 NUTF2P61970 127 aaKnown RBP9.12□□□□□ -0.95
CCS-202ENST00000525435 PSG9Q00887 426 aa9.12□□□□□ -0.95
CCS-202ENST00000525435 ZNF124Q15973 351 aa9.12□□□□□ -0.95
CCS-202ENST00000525435 PSG3Q16557 428 aa9.12□□□□□ -0.95
CCS-202ENST00000525435 KHDC3LQ587J8 217 aa9.12□□□□□ -0.95
CCS-202ENST00000525435 ACTL10Q5JWF8 245 aa9.12□□□□□ -0.95
CCS-202ENST00000525435 EBLN2Q6P2I7 272 aa9.12□□□□□ -0.95
CCS-202ENST00000525435 PQLC2Q6ZP29 291 aa9.12□□□□□ -0.95
CCS-202ENST00000525435 TMUB2Q71RG4 321 aa9.12□□□□□ -0.95
CCS-202ENST00000525435 TRPT1Q86TN4 253 aaKnown RBP9.12□□□□□ -0.95
CCS-202ENST00000525435 ASCL2Q99929 193 aa9.12□□□□□ -0.95
CCS-202ENST00000525435 PAXXQ9BUH6 204 aa9.12□□□□□ -0.95
CCS-202ENST00000525435 ZNF586Q9NXT0 402 aa9.12□□□□□ -0.95
CCS-202ENST00000525435 TP53TG1Q9Y2A0 90 aa9.12□□□□□ -0.95
CCS-202ENST00000525435 HLA-DRB4X5D2U9 266 aa9.12□□□□□ -0.95
CCS-202ENST00000525435 KNCNA6PVL3 124 aa9.11□□□□□ -0.95
CCS-202ENST00000525435 RPL35AP18077 110 aaKnown RBP9.11□□□□□ -0.95
CCS-202ENST00000525435 C4BPBP20851 252 aa9.11□□□□□ -0.95
CCS-202ENST00000525435 LGALSLQ3ZCW2 172 aaPredicted RBP9.11□□□□□ -0.95
CCS-202ENST00000525435 LYPD1Q8N2G4 141 aa9.11□□□□□ -0.95
CCS-202ENST00000525435 RPP25LQ8N5L8 163 aaKnown RBP9.11□□□□□ -0.95
CCS-202ENST00000525435 RNF141Q8WVD5 230 aa9.11□□□□□ -0.95
CCS-202ENST00000525435 MRPL53Q96EL3 112 aaKnown RBP9.11□□□□□ -0.95
CCS-202ENST00000525435 C20orf173Q96LM9 149 aa9.11□□□□□ -0.95
CCS-202ENST00000525435 ACTR3CQ9C0K3 210 aaPredicted RBP9.11□□□□□ -0.95
CCS-202ENST00000525435 PRELID1Q9Y255 219 aa9.11□□□□□ -0.95
CCS-202ENST00000525435 RFNGQ9Y644 331 aa9.11□□□□□ -0.95
CCS-202ENST00000525435 A0A0J9YX75 114 aa9.1□□□□□ -0.95
CCS-202ENST00000525435 A0A1B0GVG6 124 aa9.1□□□□□ -0.95
CCS-202ENST00000525435 OR7C2O60412 319 aa9.1□□□□□ -0.95
CCS-202ENST00000525435 PFDN1O60925 122 aa9.1□□□□□ -0.95
CCS-202ENST00000525435 DUSP14O95147 198 aaKnown RBP9.1□□□□□ -0.95
CCS-202ENST00000525435 SEC11BP0C7V7 166 aa9.1□□□□□ -0.95
CCS-202ENST00000525435 RAB2AP61019 212 aa9.1□□□□□ -0.95
CCS-202ENST00000525435 AKR1C8PQ5T2L2 129 aa9.1□□□□□ -0.95
CCS-202ENST00000525435 RAB24Q969Q5 203 aa9.1□□□□□ -0.95
CCS-202ENST00000525435 FXYD5Q96DB9 178 aa9.1□□□□□ -0.95
CCS-202ENST00000525435 SH3BGRL3Q9H299 93 aa9.1□□□□□ -0.95
CCS-202ENST00000525435 A8MTW9 85 aa9.09□□□□□ -0.95
CCS-202ENST00000525435 UMAD1C9J7I0 102 aa9.09□□□□□ -0.95
CCS-202ENST00000525435 NDUFB4O95168 129 aa9.09□□□□□ -0.95
CCS-202ENST00000525435 STAG3L2P0CL84 134 aa9.09□□□□□ -0.95
CCS-202ENST00000525435 STAG3L3P0CL85 134 aa9.09□□□□□ -0.95
CCS-202ENST00000525435 PYYP10082 97 aa9.09□□□□□ -0.95
CCS-202ENST00000525435 CDC34P49427 236 aaPredicted RBP9.09□□□□□ -0.95
CCS-202ENST00000525435 EIF5AL1Q6IS14 154 aaKnown RBP9.09□□□□□ -0.95
CCS-202ENST00000525435 BAP18Q8IXM2 172 aa9.09□□□□□ -0.95
CCS-202ENST00000525435 ZNF738Q8NE65 137 aa9.09□□□□□ -0.95
CCS-202ENST00000525435 STOML3Q8TAV4 291 aa9.09□□□□□ -0.95
CCS-202ENST00000525435 RPUSD4Q96CM3 377 aaKnown RBP9.09□□□□□ -0.95
CCS-202ENST00000525435 ZNF503Q96F45 646 aa9.09□□□□□ -0.95
CCS-202ENST00000525435 ZNF471Q9BX82 626 aaPredicted RBP9.09□□□□□ -0.95
CCS-202ENST00000525435 C1QTNF4Q9BXJ3 329 aa9.09□□□□□ -0.95
CCS-202ENST00000525435 U3KQK5 164 aa9.09□□□□□ -0.95
CCS-202ENST00000525435 SLC17A3O00476 420 aa9.08□□□□□ -0.96
CCS-202ENST00000525435 TPT1P13693 172 aaKnown RBP9.08□□□□□ -0.96
CCS-202ENST00000525435 ZFP69Q49AA0 526 aa9.08□□□□□ -0.96
CCS-202ENST00000525435 IGFL4Q6B9Z1 124 aa9.08□□□□□ -0.96
CCS-202ENST00000525435 FAM122CQ6P4D5 195 aa9.08□□□□□ -0.96
CCS-202ENST00000525435 RNF182Q8N6D2 247 aa9.08□□□□□ -0.96
CCS-202ENST00000525435 OR8A1Q8NGG7 326 aa9.08□□□□□ -0.96
CCS-202ENST00000525435 RNF183Q96D59 192 aa9.08□□□□□ -0.96
CCS-202ENST00000525435 AAMDCQ9H7C9 122 aa9.08□□□□□ -0.96
CCS-202ENST00000525435 CTXND1A0A1B0GTU2 59 aa9.07□□□□□ -0.96
CCS-202ENST00000525435 SPRY2O43597 315 aa9.07□□□□□ -0.96
CCS-202ENST00000525435 CXorf1O96002 111 aa9.07□□□□□ -0.96
CCS-202ENST00000525435 CA1P00915 261 aaPredicted RBP9.07□□□□□ -0.96
CCS-202ENST00000525435 SNRPCP09234 159 aaKnown RBP9.07□□□□□ -0.96
CCS-202ENST00000525435 GIG44P09565 113 aaPredicted RBP9.07□□□□□ -0.96
CCS-202ENST00000525435 OR10J4P0C629 311 aa9.07□□□□□ -0.96
CCS-202ENST00000525435 UBE2L3P68036 154 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms