RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 KRTAP10-4P60372 401 aaPredicted RBP1.08□□□□□ -2.24
COPB1-203ENST00000525214 LSM3P62310 102 aaKnown RBP1.08□□□□□ -2.24
COPB1-203ENST00000525214 KLRD1Q13241 179 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 OR8B8Q15620 311 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 TPRXLQ17RH7 258 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 DEFB115Q30KQ5 88 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 VMA21Q3ZAQ7 101 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 PATE2Q6UY27 113 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 C9orf163Q8N9P6 203 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 OR4B1Q8NGF8 309 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 ZNF418Q8TF45 676 aaPredicted RBP1.08□□□□□ -2.24
COPB1-203ENST00000525214 C4orf3Q8WVX3 66 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 ZC2HC1AQ96GY0 325 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 TMEM138Q9NPI0 162 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 OR5AC2Q9NZP5 309 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 TRAPPC2LQ9UL33 140 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 PAIP2BQ9ULR5 123 aaKnown RBP1.08□□□□□ -2.24
COPB1-203ENST00000525214 RNF11Q9Y3C5 154 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 ADGRB3O60242 1522 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 GLI3P10071 1580 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 TAF1LQ8IZX4 1826 aa1.08□□□□□ -2.24
COPB1-203ENST00000525214 MYO5AQ9Y4I1 1855 aaKnown RBP1.07□□□□□ -2.24
COPB1-203ENST00000525214 OVOS2A0A0G2JMS6 1433 aa1.07□□□□□ -2.24
COPB1-203ENST00000525214 KIAA1107Q9UPP5 1409 aa1.07□□□□□ -2.24
COPB1-203ENST00000525214 ALPK2Q86TB3 2170 aa1.07□□□□□ -2.24
COPB1-203ENST00000525214 A2MP01023 1474 aa1.07□□□□□ -2.24
COPB1-203ENST00000525214 CEP152O94986 1710 aa1.07□□□□□ -2.24
COPB1-203ENST00000525214 TRAV1-1A0A0B4J248 108 aa1.07□□□□□ -2.24
COPB1-203ENST00000525214 LYRM1O43325 122 aa1.07□□□□□ -2.24
COPB1-203ENST00000525214 OR1I1O60431 355 aa1.07□□□□□ -2.24
COPB1-203ENST00000525214 DPM2O94777 84 aa1.07□□□□□ -2.24
COPB1-203ENST00000525214 GPX1P07203 203 aa1.07□□□□□ -2.24
COPB1-203ENST00000525214 MRPS36P82909 103 aaKnown RBP1.07□□□□□ -2.24
COPB1-203ENST00000525214 PDE6HQ13956 83 aa1.07□□□□□ -2.24
COPB1-203ENST00000525214 HES1Q14469 280 aa1.07□□□□□ -2.24
COPB1-203ENST00000525214 ZNF846Q147U1 533 aa1.07□□□□□ -2.24
COPB1-203ENST00000525214 Q1T7F1 81 aa1.07□□□□□ -2.24
COPB1-203ENST00000525214 RNASE10Q5GAN6 216 aaKnown RBP1.07□□□□□ -2.24
COPB1-203ENST00000525214 HRCT1Q6UXD1 115 aa1.07□□□□□ -2.24
COPB1-203ENST00000525214 LINC00305Q7Z4B0 112 aa1.07□□□□□ -2.24
COPB1-203ENST00000525214 OR2T35Q8NGX2 323 aa1.07□□□□□ -2.24
COPB1-203ENST00000525214 TMEM254Q8TBM7 123 aa1.07□□□□□ -2.24
COPB1-203ENST00000525214 SFT2D1Q8WV19 159 aa1.07□□□□□ -2.24
COPB1-203ENST00000525214 MAGOHBQ96A72 148 aaKnown RBP1.07□□□□□ -2.24
COPB1-203ENST00000525214 CHCHD1Q96BP2 118 aaKnown RBP1.07□□□□□ -2.24
COPB1-203ENST00000525214 TCEAL4Q96EI5 215 aa1.07□□□□□ -2.24
COPB1-203ENST00000525214 RETNLBQ9BQ08 111 aa1.07□□□□□ -2.24
COPB1-203ENST00000525214 XIRP1Q702N8 1843 aaKnown RBP1.07□□□□□ -2.24
COPB1-203ENST00000525214 INTS1Q8N201 2190 aaKnown RBP1.07□□□□□ -2.24
COPB1-203ENST00000525214 MED23Q9ULK4 1368 aa1.07□□□□□ -2.24
COPB1-203ENST00000525214 KDM6AO15550 1401 aaPredicted RBP1.06□□□□□ -2.24
COPB1-203ENST00000525214 CHD3Q12873 2000 aaKnown RBP1.06□□□□□ -2.24
COPB1-203ENST00000525214 STRCQ7RTU9 1775 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 VIRMAQ69YN4 1812 aaKnown RBP1.06□□□□□ -2.24
COPB1-203ENST00000525214 TRAV14DV4A0A0A6YYC5 116 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 TRAV13-1A0A0B4J241 112 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 TRAV3A0A0B4J244 114 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 TRAV12-1A0A0B4J245 112 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 TRBV27A0A0K0K1C4 114 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 LOC107984640A0A0U1RRK4 108 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 H3BMG7 143 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 K7ERJ3 54 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 CRPP02741 224 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 MT-ND6P03923 174 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 CMPK1P30085 196 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 BRS3P32247 399 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 SSR2P43308 183 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 DSCR4P56555 118 aaPredicted RBP1.06□□□□□ -2.24
COPB1-203ENST00000525214 ROMO1P60602 79 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 CDK6Q00534 326 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 MORN2Q502X0 79 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 C2orf82Q6UX34 121 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 C4orf22Q6V702 233 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 TCTE3Q8IZS6 198 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 LINC00311Q8N616 119 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 FAM216BQ8N7L0 139 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 OR5D14Q8NGL3 314 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 OR5H6Q8NGV6 325 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 SPACA4Q8TDM5 124 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 DIRC1Q969H9 104 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 PRELID3AQ96N28 172 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 TP53RKQ96S44 253 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 SOX21Q9Y651 276 aaPredicted RBP1.06□□□□□ -2.24
COPB1-203ENST00000525214 KIAA1549Q9HCM3 1950 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 FREM3P0C091 2139 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 TNS3Q68CZ2 1445 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 ARFGEF3Q5TH69 2177 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 MED13Q9UHV7 2174 aa1.06□□□□□ -2.24
COPB1-203ENST00000525214 UNC13CQ8NB66 2214 aa1.05□□□□□ -2.24
COPB1-203ENST00000525214 FANCMQ8IYD8 2048 aa1.05□□□□□ -2.24
COPB1-203ENST00000525214 TRAV27A0A087WT01 109 aa1.05□□□□□ -2.24
COPB1-203ENST00000525214 TCRBV4S1A1TA0A5B7 111 aa1.05□□□□□ -2.24
COPB1-203ENST00000525214 OR2T8A6NH00 312 aa1.05□□□□□ -2.24
COPB1-203ENST00000525214 C9JAW5 83 aa1.05□□□□□ -2.24
COPB1-203ENST00000525214 E7EUB6 86 aa1.05□□□□□ -2.24
COPB1-203ENST00000525214 M0R233 179 aa1.05□□□□□ -2.24
COPB1-203ENST00000525214 TNFSF15O95150 251 aa1.05□□□□□ -2.24
COPB1-203ENST00000525214 OR2H2O95918 312 aa1.05□□□□□ -2.24
COPB1-203ENST00000525214 RPL22P35268 128 aaKnown RBP1.05□□□□□ -2.24
COPB1-203ENST00000525214 CKS1BP61024 79 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms