RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 HSPE1-MOB4S4R3N1 261 aa3.26□□□□□ -1.89
USP47-204ENST00000525078 ITSN1Q15811 1721 aa3.26□□□□□ -1.89
USP47-204ENST00000525078 ZNF518AQ6AHZ1 1483 aa3.26□□□□□ -1.89
USP47-204ENST00000525078 MAGI1Q96QZ7 1491 aaPredicted RBP3.26□□□□□ -1.89
USP47-204ENST00000525078 OBSL1O75147 1896 aa3.26□□□□□ -1.89
USP47-204ENST00000525078 CCDC88AQ3V6T2 1871 aa3.26□□□□□ -1.89
USP47-204ENST00000525078 DISP2A7MBM2 1401 aa3.26□□□□□ -1.89
USP47-204ENST00000525078 LCTP09848 1927 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 MYO10Q9HD67 2058 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 CLTCQ00610 1675 aaKnown RBP3.25□□□□□ -1.89
USP47-204ENST00000525078 FANCAO15360 1455 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 ERVK-7P63135 1459 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 A0A0J9YX75 114 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 TRBV27A0A0K0K1C4 114 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 LY6LH3BQJ8 138 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 TIMM17BO60830 172 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 IGF2P01344 180 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 GPX1P07203 203 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 IGLC6P0CF74 106 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 ZNF705BP0CI00 300 aaPredicted RBP3.25□□□□□ -1.89
USP47-204ENST00000525078 LINC00694P0DN24 101 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 COX6A1P12074 109 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 ZNF25P17030 456 aaPredicted RBP3.25□□□□□ -1.89
USP47-204ENST00000525078 CRYGSP22914 178 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 EMX2Q04743 252 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 AAED1Q7RTV5 226 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 Q8NDZ9 215 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 OR4B1Q8NGF8 309 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 OR4C6Q8NH72 309 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 TCEAL7Q9BRU2 100 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 NHP2Q9NX24 153 aaKnown RBP3.25□□□□□ -1.89
USP47-204ENST00000525078 ANAPC11Q9NYG5 84 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 R4GN34 69 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 RIC1Q4ADV7 1423 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 ADGRB1O14514 1584 aa3.25□□□□□ -1.89
USP47-204ENST00000525078 NACAE9PAV3 2078 aa3.24□□□□□ -1.89
USP47-204ENST00000525078 SYCP2Q9BX26 1530 aa3.24□□□□□ -1.89
USP47-204ENST00000525078 QRICH2Q9H0J4 1663 aa3.24□□□□□ -1.89
USP47-204ENST00000525078 CDK12Q9NYV4 1490 aaPredicted RBP3.24□□□□□ -1.89
USP47-204ENST00000525078 RIMBP3CA6NJZ7 1639 aa3.24□□□□□ -1.89
USP47-204ENST00000525078 RIMBP3BA6NNM3 1639 aa3.24□□□□□ -1.89
USP47-204ENST00000525078 RIMBP3Q9UFD9 1639 aa3.24□□□□□ -1.89
USP47-204ENST00000525078 CPSF4O95639 269 aaKnown RBP3.24□□□□□ -1.89
USP47-204ENST00000525078 AQP4P55087 323 aa3.24□□□□□ -1.89
USP47-204ENST00000525078 KLRD1Q13241 179 aa3.24□□□□□ -1.89
USP47-204ENST00000525078 LCN15Q6UWW0 184 aa3.24□□□□□ -1.89
USP47-204ENST00000525078 C7orf65Q6ZTY9 151 aa3.24□□□□□ -1.89
USP47-204ENST00000525078 HMGN2P46Q86SG4 172 aa3.24□□□□□ -1.89
USP47-204ENST00000525078 MCEEQ96PE7 176 aa3.24□□□□□ -1.89
USP47-204ENST00000525078 BCL2L10Q9HD36 194 aa3.24□□□□□ -1.89
USP47-204ENST00000525078 SMAD5-AS1Q9Y6J3 95 aa3.24□□□□□ -1.89
USP47-204ENST00000525078 GLI2P10070 1586 aa3.24□□□□□ -1.89
USP47-204ENST00000525078 CRYBG1Q9Y4K1 1723 aa3.24□□□□□ -1.89
USP47-204ENST00000525078 LRRC7Q96NW7 1537 aa3.24□□□□□ -1.89
USP47-204ENST00000525078 PPLO60437 1756 aa3.23□□□□□ -1.89
USP47-204ENST00000525078 IGHV1-18A0A0C4DH31 117 aa3.23□□□□□ -1.89
USP47-204ENST00000525078 A8MWV9 139 aa3.23□□□□□ -1.89
USP47-204ENST00000525078 TCRAP04437 139 aa3.23□□□□□ -1.89
USP47-204ENST00000525078 TSPAN19P0C672 248 aa3.23□□□□□ -1.89
USP47-204ENST00000525078 PYDC2Q56P42 97 aa3.23□□□□□ -1.89
USP47-204ENST00000525078 RNF182Q8N6D2 247 aa3.23□□□□□ -1.89
USP47-204ENST00000525078 ANKRD31Q8N7Z5 1873 aa3.23□□□□□ -1.89
USP47-204ENST00000525078 C3orf56Q8N813 242 aa3.23□□□□□ -1.89
USP47-204ENST00000525078 NYNRINQ9P2P1 1898 aaKnown RBP3.23□□□□□ -1.89
USP47-204ENST00000525078 PIK3C2AO00443 1686 aa3.23□□□□□ -1.89
USP47-204ENST00000525078 ABCC1P33527 1531 aa3.23□□□□□ -1.89
USP47-204ENST00000525078 NEXMIFQ5QGS0 1516 aa3.23□□□□□ -1.89
USP47-204ENST00000525078 LMTK2Q8IWU2 1503 aa3.23□□□□□ -1.89
USP47-204ENST00000525078 FER1L6Q2WGJ9 1857 aa3.22□□□□□ -1.89
USP47-204ENST00000525078 ARHGEF28Q8N1W1 1705 aaKnown RBP3.22□□□□□ -1.89
USP47-204ENST00000525078 FAM135BQ49AJ0 1406 aa3.22□□□□□ -1.89
USP47-204ENST00000525078 PRG4Q92954 1404 aaPredicted RBP3.22□□□□□ -1.89
USP47-204ENST00000525078 KIF20BQ96Q89 1820 aa3.22□□□□□ -1.89
USP47-204ENST00000525078 OR2T8A6NH00 312 aa3.22□□□□□ -1.89
USP47-204ENST00000525078 METTL15P1P0C7V9 234 aa3.22□□□□□ -1.89
USP47-204ENST00000525078 TRGC1P0CF51 173 aa3.22□□□□□ -1.89
USP47-204ENST00000525078 FOXA3P55318 350 aaPredicted RBP3.22□□□□□ -1.89
USP47-204ENST00000525078 IDO2Q6ZQW0 420 aa3.22□□□□□ -1.89
USP47-204ENST00000525078 NAT14Q8WUY8 206 aa3.22□□□□□ -1.89
USP47-204ENST00000525078 KRTAP2-2Q9BYT5 123 aa3.22□□□□□ -1.89
USP47-204ENST00000525078 ATRXP46100 2492 aa3.22□□□□□ -1.89
USP47-204ENST00000525078 PTPRSQ13332 1948 aa3.22□□□□□ -1.89
USP47-204ENST00000525078 ADGRB3O60242 1522 aa3.22□□□□□ -1.89
USP47-204ENST00000525078 ATP7AQ04656 1500 aa3.22□□□□□ -1.89
USP47-204ENST00000525078 RTL9Q8NET4 1388 aa3.22□□□□□ -1.89
USP47-204ENST00000525078 MRC2Q9UBG0 1479 aa3.22□□□□□ -1.89
USP47-204ENST00000525078 EML6Q6ZMW3 1958 aa3.21□□□□□ -1.89
USP47-204ENST00000525078 SPEF2Q9C093 1822 aa3.21□□□□□ -1.89
USP47-204ENST00000525078 ZFYVE16Q7Z3T8 1539 aa3.21□□□□□ -1.9
USP47-204ENST00000525078 A0A1B0GVG6 124 aa3.21□□□□□ -1.9
USP47-204ENST00000525078 NPFFO15130 113 aa3.21□□□□□ -1.9
USP47-204ENST00000525078 FUSP35637 526 aaKnown RBP eCLIP3.21□□□□□ -1.9
USP47-204ENST00000525078 GUCA1AP43080 201 aaPredicted RBP3.21□□□□□ -1.9
USP47-204ENST00000525078 HINT1P49773 126 aaPredicted RBP3.21□□□□□ -1.9
USP47-204ENST00000525078 LSM3P62310 102 aaKnown RBP3.21□□□□□ -1.9
USP47-204ENST00000525078 DEFB128Q7Z7B8 93 aa3.21□□□□□ -1.9
USP47-204ENST00000525078 FAM216BQ8N7L0 139 aa3.21□□□□□ -1.9
USP47-204ENST00000525078 MORN4Q8NDC4 146 aa3.21□□□□□ -1.9
USP47-204ENST00000525078 CHCHD1Q96BP2 118 aaKnown RBP3.21□□□□□ -1.9
USP47-204ENST00000525078 MRPS24Q96EL2 167 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms