RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 S4R3C0 116 aa8.72□□□□□ -1.01
HDAC9-228ENST00000524023 ODF3BA8MYP8 253 aa8.71□□□□□ -1.01
HDAC9-228ENST00000524023 SYS1-DBNDD2H3BUS1 97 aa8.71□□□□□ -1.01
HDAC9-228ENST00000524023 ARMS2P0C7Q2 107 aa8.71□□□□□ -1.01
HDAC9-228ENST00000524023 PRB4P10163 310 aaPredicted RBP8.71□□□□□ -1.01
HDAC9-228ENST00000524023 C5orf64Q2M2E5 130 aa8.71□□□□□ -1.01
HDAC9-228ENST00000524023 BCL6BQ8N143 479 aaPredicted RBP8.71□□□□□ -1.01
HDAC9-228ENST00000524023 FANCD2OSQ96PS1 177 aa8.71□□□□□ -1.01
HDAC9-228ENST00000524023 TRAV30A0A087WSZ9 112 aa8.71□□□□□ -1.02
HDAC9-228ENST00000524023 OR4C46A6NHA9 309 aa8.71□□□□□ -1.02
HDAC9-228ENST00000524023 M0R1W7 72 aa8.71□□□□□ -1.02
HDAC9-228ENST00000524023 M0R3E3 92 aa8.71□□□□□ -1.02
HDAC9-228ENST00000524023 GNG7O60262 68 aa8.71□□□□□ -1.02
HDAC9-228ENST00000524023 NDUFB8O95169 186 aa8.71□□□□□ -1.02
HDAC9-228ENST00000524023 CRIP1P50238 77 aa8.71□□□□□ -1.02
HDAC9-228ENST00000524023 HES1Q14469 280 aa8.71□□□□□ -1.02
HDAC9-228ENST00000524023 TIMD4Q96H15 378 aa8.71□□□□□ -1.02
HDAC9-228ENST00000524023 IGLV11-55A0A075B6I3 123 aa8.7□□□□□ -1.02
HDAC9-228ENST00000524023 LOC105371242A0A075B767 164 aa8.7□□□□□ -1.02
HDAC9-228ENST00000524023 A0A1W2PRD5 423 aa8.7□□□□□ -1.02
HDAC9-228ENST00000524023 A0A1W2PRF3 423 aa8.7□□□□□ -1.02
HDAC9-228ENST00000524023 A0A1W2PRM7 423 aa8.7□□□□□ -1.02
HDAC9-228ENST00000524023 NPIPB5A8MRT5 1133 aa8.7□□□□□ -1.02
HDAC9-228ENST00000524023 CCL21O00585 134 aa8.7□□□□□ -1.02
HDAC9-228ENST00000524023 PRTN3P24158 256 aa8.7□□□□□ -1.02
HDAC9-228ENST00000524023 ZNF138P52744 262 aa8.7□□□□□ -1.02
HDAC9-228ENST00000524023 MFAP4P55083 255 aa8.7□□□□□ -1.02
HDAC9-228ENST00000524023 RIGQ13278 110 aa8.7□□□□□ -1.02
HDAC9-228ENST00000524023 DMRTA1Q5VZB9 504 aa8.7□□□□□ -1.02
HDAC9-228ENST00000524023 GATD1Q8NB37 220 aa8.7□□□□□ -1.02
HDAC9-228ENST00000524023 ZNF48Q96MX3 618 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-228ENST00000524023 F8W735 103 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-228ENST00000524023 OR5AL1P0C617 328 aa8.69□□□□□ -1.02
HDAC9-228ENST00000524023 HINT1P49773 126 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-228ENST00000524023 PDE6HQ13956 83 aa8.69□□□□□ -1.02
HDAC9-228ENST00000524023 CDSNQ15517 529 aa8.69□□□□□ -1.02
HDAC9-228ENST00000524023 ZNF562Q6V9R5 426 aa8.69□□□□□ -1.02
HDAC9-228ENST00000524023 S100A7AQ86SG5 101 aa8.69□□□□□ -1.02
HDAC9-228ENST00000524023 A0A1B0GW15 77 aa8.69□□□□□ -1.02
HDAC9-228ENST00000524023 CYB5R2Q6BCY4 276 aa8.69□□□□□ -1.02
HDAC9-228ENST00000524023 ARPC1AQ92747 370 aa8.69□□□□□ -1.02
HDAC9-228ENST00000524023 TMUB1Q9BVT8 246 aa8.69□□□□□ -1.02
HDAC9-228ENST00000524023 CSN3P07498 182 aa8.68□□□□□ -1.02
HDAC9-228ENST00000524023 NDPQ00604 133 aa8.68□□□□□ -1.02
HDAC9-228ENST00000524023 Q6AWC8 147 aa8.68□□□□□ -1.02
HDAC9-228ENST00000524023 TTC9CQ8N5M4 171 aa8.68□□□□□ -1.02
HDAC9-228ENST00000524023 NEU4Q8WWR8 484 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-228ENST00000524023 C8orf49Q96NF6 230 aa8.68□□□□□ -1.02
HDAC9-228ENST00000524023 AAMDCQ9H7C9 122 aa8.68□□□□□ -1.02
HDAC9-228ENST00000524023 NBASA2RRP1 2371 aa8.68□□□□□ -1.02
HDAC9-228ENST00000524023 C11orf71Q6IPW1 123 aa8.68□□□□□ -1.02
HDAC9-228ENST00000524023 DYNAPQ8N1N2 210 aa8.68□□□□□ -1.02
HDAC9-228ENST00000524023 MAP1LC3CQ9BXW4 147 aa8.68□□□□□ -1.02
HDAC9-228ENST00000524023 ST20Q9HBF5 79 aa8.68□□□□□ -1.02
HDAC9-228ENST00000524023 NCBP2LA6PVI3 153 aaKnown RBP8.67□□□□□ -1.02
HDAC9-228ENST00000524023 CT45A10P0DMU9 189 aa8.67□□□□□ -1.02
HDAC9-228ENST00000524023 ADORA2A-AS1P86434 159 aa8.67□□□□□ -1.02
HDAC9-228ENST00000524023 PET117Q6UWS5 81 aa8.67□□□□□ -1.02
HDAC9-228ENST00000524023 TPPP3Q9BW30 176 aa8.67□□□□□ -1.02
HDAC9-228ENST00000524023 TMEM191AQ9H0A3 160 aa8.67□□□□□ -1.02
HDAC9-228ENST00000524023 C21orf62Q9NYP8 219 aa8.67□□□□□ -1.02
HDAC9-228ENST00000524023 ASH1LQ9NR48 2969 aaKnown RBP8.67□□□□□ -1.02
HDAC9-228ENST00000524023 hDV102S1A0JD36 115 aa8.66□□□□□ -1.02
HDAC9-228ENST00000524023 CSN1S1P47710 185 aa8.66□□□□□ -1.02
HDAC9-228ENST00000524023 PSG9Q00887 426 aa8.66□□□□□ -1.02
HDAC9-228ENST00000524023 CCDC144NLQ6NUI1 221 aa8.66□□□□□ -1.02
HDAC9-228ENST00000524023 ZNF493Q6ZR52 646 aa8.66□□□□□ -1.02
HDAC9-228ENST00000524023 VMO1Q7Z5L0 202 aa8.66□□□□□ -1.02
HDAC9-228ENST00000524023 Q8N6K4 173 aa8.66□□□□□ -1.02
HDAC9-228ENST00000524023 HSPB8Q9UJY1 196 aa8.66□□□□□ -1.02
HDAC9-228ENST00000524023 SERTM2A0A1B0GWG4 89 aa8.66□□□□□ -1.02
HDAC9-228ENST00000524023 IGHV3-23P01764 117 aa8.66□□□□□ -1.02
HDAC9-228ENST00000524023 C1orf122Q6ZSJ8 110 aa8.66□□□□□ -1.02
HDAC9-228ENST00000524023 AP5S1Q9NUS5 200 aa8.66□□□□□ -1.02
HDAC9-228ENST00000524023 THYN1Q9P016 225 aa8.66□□□□□ -1.02
HDAC9-228ENST00000524023 WNK2Q9Y3S1 2297 aa8.66□□□□□ -1.02
HDAC9-228ENST00000524023 OR2T8A6NH00 312 aa8.65□□□□□ -1.02
HDAC9-228ENST00000524023 EBI3Q14213 229 aa8.65□□□□□ -1.02
HDAC9-228ENST00000524023 LYZL1Q6UWQ5 148 aa8.65□□□□□ -1.02
HDAC9-228ENST00000524023 ORAOV1Q8WV07 137 aa8.65□□□□□ -1.02
HDAC9-228ENST00000524023 TP73-AS1Q9UF72 201 aa8.65□□□□□ -1.02
HDAC9-228ENST00000524023 TMEM189A5PLL7 270 aa8.65□□□□□ -1.03
HDAC9-228ENST00000524023 OOSP1A8MZH6 123 aa8.65□□□□□ -1.03
HDAC9-228ENST00000524023 SH2D1AO60880 128 aa8.65□□□□□ -1.03
HDAC9-228ENST00000524023 CTSGP08311 255 aa8.65□□□□□ -1.03
HDAC9-228ENST00000524023 RPL7P18124 248 aaKnown RBP8.65□□□□□ -1.03
HDAC9-228ENST00000524023 UNQ5815/PRO19632Q6UWF5 114 aa8.65□□□□□ -1.03
HDAC9-228ENST00000524023 COX8CQ7Z4L0 72 aa8.65□□□□□ -1.03
HDAC9-228ENST00000524023 MCRIP2Q9BUT9 160 aaKnown RBP8.65□□□□□ -1.03
HDAC9-228ENST00000524023 IGF2RP11717 2491 aa8.64□□□□□ -1.03
HDAC9-228ENST00000524023 SVEP1Q4LDE5 3571 aa8.64□□□□□ -1.03
HDAC9-228ENST00000524023 IGKV2-40A0A087WW87 121 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-228ENST00000524023 TMSB15BA0A087X1C1 80 aa8.64□□□□□ -1.03
HDAC9-228ENST00000524023 HSBP1L1C9JCN9 74 aa8.64□□□□□ -1.03
HDAC9-228ENST00000524023 IGKV2D-40P01614 121 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-228ENST00000524023 EGR2P11161 476 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-228ENST00000524023 LINC01545Q5VT33 79 aa8.64□□□□□ -1.03
HDAC9-228ENST00000524023 FA2HQ7L5A8 372 aa8.64□□□□□ -1.03
HDAC9-228ENST00000524023 ARL6IP6Q8N6S5 226 aa8.64□□□□□ -1.03
HDAC9-228ENST00000524023 PRSS3P2Q8NHM4 247 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms