RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 PLA2G10O15496 165 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 CRTAPO75718 401 aaPredicted RBP1.9□□□□□ -2.11
SKP1-212ENST00000523966 LYZL6O75951 148 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 CA2P00918 260 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 IFNA6P05013 189 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 AKAIN1P0CW23 69 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 SPNP16150 400 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 HIST1H1DP16402 221 aaKnown RBP1.9□□□□□ -2.11
SKP1-212ENST00000523966 CNTFRP26992 372 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 BLVRBP30043 206 aaPredicted RBP1.9□□□□□ -2.11
SKP1-212ENST00000523966 KCNJ3P48549 501 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 IDH3GP51553 393 aaPredicted RBP1.9□□□□□ -2.11
SKP1-212ENST00000523966 TAS2R20P59543 309 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 GNG2P59768 71 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 QRFPP83859 136 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 CD164Q04900 197 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 CDK10Q15131 360 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 ELP2Q6IA86 826 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 HCP5Q6MZN7 132 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 GLIPR1L1Q6UWM5 242 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 NAA40Q86UY6 237 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 DOLPP1Q86YN1 238 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 OR5AS1Q8N127 324 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 GATD1Q8NB37 220 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 TMEM229BQ8NBD8 167 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 ST6GALNAC3Q8NDV1 305 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 OR51T1Q8NGJ9 327 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 OR2AE1Q8NHA4 323 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 OR5P3Q8WZ94 311 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 AQP3Q92482 292 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 PRRT1Q99946 306 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 RTL8AQ9BWD3 113 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 CHST6Q9GZX3 395 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 ALX4Q9H161 411 aaPredicted RBP1.9□□□□□ -2.11
SKP1-212ENST00000523966 PLEKHJ1Q9NW61 149 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 GLS2Q9UI32 602 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 CARHSP1Q9Y2V2 147 aaKnown RBP1.9□□□□□ -2.11
SKP1-212ENST00000523966 FAM215AQ9Y5M1 114 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 NUBP2Q9Y5Y2 271 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 SPG11Q96JI7 2443 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 LOC400499M0QZD8 3231 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 USF3Q68DE3 2245 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 WNK2Q9Y3S1 2297 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 FAM208BQ5VWN6 2430 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 DOCK11Q5JSL3 2073 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.89□□□□□ -2.113e-6■□□□□ 10.9
SKP1-212ENST00000523966 MED13LQ71F56 2210 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 A0A1B0GVG6 124 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 TMEM235A6NFC5 223 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 SNRPGP15A8MWD9 76 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 IQCF6A8MYZ5 107 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 DISC1C4P0D8 188 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 MCRIP1C9JLW8 97 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 INMT-MINDY4F8WBC2 141 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 H3BMM0 161 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 TCF21O43680 179 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 CREBL2O60519 120 aaPredicted RBP1.89□□□□□ -2.11
SKP1-212ENST00000523966 NOS1APO75052 506 aaPredicted RBP1.89□□□□□ -2.11
SKP1-212ENST00000523966 OR7C1O76099 320 aaPredicted RBP1.89□□□□□ -2.11
SKP1-212ENST00000523966 NDUFB6O95139 128 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 TCRBP04435 133 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 IL5P05113 134 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 CTXN2P0C2S0 81 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 NQO2P16083 231 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 S100GP29377 79 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 GLRXP35754 106 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 CA7P43166 264 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 HAAOP46952 286 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 RBM11P57052 281 aaKnown RBP1.89□□□□□ -2.11
SKP1-212ENST00000523966 FGF12P61328 243 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 PRDX4Q13162 271 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 SURF2Q15527 256 aaPredicted RBP1.89□□□□□ -2.11
SKP1-212ENST00000523966 OR8G1Q15617 311 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 GRK1Q15835 563 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 KCNJ8Q15842 424 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 MPV17LQ2QL34 196 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 KRTAP25-1Q3LHN0 102 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 RNASE10Q5GAN6 216 aaKnown RBP1.89□□□□□ -2.11
SKP1-212ENST00000523966 OR2T2Q6IF00 324 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 OR10K2Q6IF99 312 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 SLC25A26Q70HW3 274 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 AKAP14Q86UN6 197 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 TERB2Q8NHR7 220 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 ASB13Q8WXK3 278 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 UBE2WQ96B02 151 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 CMBLQ96DG6 245 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 FAAP24Q9BTP7 215 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 OR2J1Q9GZK6 312 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 LPAR5Q9H1C0 372 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 MED28Q9H204 178 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 OR51I2Q9H344 312 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 BANF2Q9H503 90 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 HRASLSQ9HDD0 168 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 KCNIP2Q9NS61 270 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 RASL12Q9NYN1 266 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 MALRD1Q5VYJ5 2156 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 EPG5Q9HCE0 2579 aa1.89□□□□□ -2.11
SKP1-212ENST00000523966 AKAP13Q12802 2813 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 ARFGEF3Q5TH69 2177 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 DCHS1Q96JQ0 3298 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms