RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 FOXI1Q12951 378 aa6.69□□□□□ -1.34
CSMD1-213ENST00000523488 ANXA2RQ3ZCQ2 193 aa6.69□□□□□ -1.34
CSMD1-213ENST00000523488 PRNTQ86SH4 94 aa6.69□□□□□ -1.34
CSMD1-213ENST00000523488 ARL17AQ8IVW1 177 aa6.69□□□□□ -1.34
CSMD1-213ENST00000523488 TMEM158Q8WZ71 300 aa6.69□□□□□ -1.34
CSMD1-213ENST00000523488 TTTY13Q9BZ97 58 aa6.69□□□□□ -1.34
CSMD1-213ENST00000523488 PRNDQ9UKY0 176 aa6.69□□□□□ -1.34
CSMD1-213ENST00000523488 TRBV7-3A0A075B6L6 115 aa6.69□□□□□ -1.34
CSMD1-213ENST00000523488 WNT9BO14905 357 aa6.69□□□□□ -1.34
CSMD1-213ENST00000523488 ERHP84090 104 aaKnown RBP6.69□□□□□ -1.34
CSMD1-213ENST00000523488 TTC32Q5I0X7 151 aa6.69□□□□□ -1.34
CSMD1-213ENST00000523488 CFAP126Q5VTH2 177 aa6.69□□□□□ -1.34
CSMD1-213ENST00000523488 Q6AWC8 147 aa6.69□□□□□ -1.34
CSMD1-213ENST00000523488 PATE2Q6UY27 113 aa6.69□□□□□ -1.34
CSMD1-213ENST00000523488 ZNF826PQ6ZT77 177 aa6.69□□□□□ -1.34
CSMD1-213ENST00000523488 VCX2Q9H322 139 aa6.69□□□□□ -1.34
CSMD1-213ENST00000523488 DKK4Q9UBT3 224 aa6.69□□□□□ -1.34
CSMD1-213ENST00000523488 TFF1P04155 84 aa6.68□□□□□ -1.34
CSMD1-213ENST00000523488 ZNF672Q499Z4 452 aaPredicted RBP6.68□□□□□ -1.34
CSMD1-213ENST00000523488 MORN5Q5VZ52 161 aa6.68□□□□□ -1.34
CSMD1-213ENST00000523488 CEND1Q8N111 149 aa6.68□□□□□ -1.34
CSMD1-213ENST00000523488 FZR1Q9UM11 496 aa6.68□□□□□ -1.34
CSMD1-213ENST00000523488 ABCA1O95477 2261 aa6.68□□□□□ -1.34
CSMD1-213ENST00000523488 GP9P14770 177 aa6.68□□□□□ -1.34
CSMD1-213ENST00000523488 SMCPP49901 116 aaPredicted RBP6.68□□□□□ -1.34
CSMD1-213ENST00000523488 LY6DQ14210 128 aa6.68□□□□□ -1.34
CSMD1-213ENST00000523488 C1orf229Q6ZS94 237 aaPredicted RBP6.68□□□□□ -1.34
CSMD1-213ENST00000523488 Q6ZUT4 128 aa6.68□□□□□ -1.34
CSMD1-213ENST00000523488 OSR1Q8TAX0 266 aaPredicted RBP6.68□□□□□ -1.34
CSMD1-213ENST00000523488 C1QTNF4Q9BXJ3 329 aa6.68□□□□□ -1.34
CSMD1-213ENST00000523488 DKK2Q9UBU2 259 aa6.68□□□□□ -1.34
CSMD1-213ENST00000523488 SSUH2Q9Y2M2 353 aa6.68□□□□□ -1.34
CSMD1-213ENST00000523488 PRSS29PA6NIE9 313 aa6.68□□□□□ -1.34
CSMD1-213ENST00000523488 IGHV3-48P01763 117 aa6.68□□□□□ -1.34
CSMD1-213ENST00000523488 ARMS2P0C7Q2 107 aa6.68□□□□□ -1.34
CSMD1-213ENST00000523488 RNASE2P10153 161 aaKnown RBP6.68□□□□□ -1.34
CSMD1-213ENST00000523488 CCL4P13236 92 aa6.68□□□□□ -1.34
CSMD1-213ENST00000523488 C12orf74Q32Q52 190 aa6.68□□□□□ -1.34
CSMD1-213ENST00000523488 LINC00305Q7Z4B0 112 aa6.68□□□□□ -1.34
CSMD1-213ENST00000523488 GTSCR1Q86UQ5 136 aa6.68□□□□□ -1.34
CSMD1-213ENST00000523488 TNFRSF18Q9Y5U5 241 aa6.68□□□□□ -1.34
CSMD1-213ENST00000523488 CADP27708 2225 aa6.68□□□□□ -1.34
CSMD1-213ENST00000523488 IL4P05112 153 aa6.67□□□□□ -1.34
CSMD1-213ENST00000523488 MEOX1P50221 254 aa6.67□□□□□ -1.34
CSMD1-213ENST00000523488 ARRDC1-AS1Q9H2J1 176 aa6.67□□□□□ -1.34
CSMD1-213ENST00000523488 D6R8Y8 96 aa6.67□□□□□ -1.34
CSMD1-213ENST00000523488 H3BVH4 76 aa6.67□□□□□ -1.34
CSMD1-213ENST00000523488 FAM106CPP0CH98 169 aa6.67□□□□□ -1.34
CSMD1-213ENST00000523488 COX6A1P12074 109 aa6.67□□□□□ -1.34
CSMD1-213ENST00000523488 FOXG1P55316 489 aaPredicted RBP6.67□□□□□ -1.34
CSMD1-213ENST00000523488 UBE2D3P61077 147 aa6.67□□□□□ -1.34
CSMD1-213ENST00000523488 UBE2D2P62837 147 aa6.67□□□□□ -1.34
CSMD1-213ENST00000523488 MRGPRG-AS1Q2M3A8 158 aa6.67□□□□□ -1.34
CSMD1-213ENST00000523488 FAM106AQ4KMX7 169 aa6.67□□□□□ -1.34
CSMD1-213ENST00000523488 SFTA2Q6UW10 78 aa6.67□□□□□ -1.34
CSMD1-213ENST00000523488 TRBV25-1A0A075B6N4 114 aa6.67□□□□□ -1.34
CSMD1-213ENST00000523488 CKS2P33552 79 aa6.67□□□□□ -1.34
CSMD1-213ENST00000523488 PSMB2P49721 201 aa6.67□□□□□ -1.34
CSMD1-213ENST00000523488 CD69Q07108 199 aa6.67□□□□□ -1.34
CSMD1-213ENST00000523488 LOXL1Q08397 574 aaPredicted RBP6.67□□□□□ -1.34
CSMD1-213ENST00000523488 TUSC5Q8IXB3 177 aa6.67□□□□□ -1.34
CSMD1-213ENST00000523488 ZCCHC24Q8N2G6 241 aaKnown RBP6.67□□□□□ -1.34
CSMD1-213ENST00000523488 CIARTQ8N365 385 aaPredicted RBP6.67□□□□□ -1.34
CSMD1-213ENST00000523488 EYSQ5T1H1 3165 aa6.67□□□□□ -1.34
CSMD1-213ENST00000523488 TBC1D28Q2M2D7 210 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 ORMDL3Q8N138 153 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 GLMPQ8WWB7 406 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 NPIPB3Q92617 1050 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 TMEM160Q9NX00 188 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 IGLV2-18A0A075B6J9 118 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 TMSB15BA0A087X1C1 80 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 TMEM8BA6NDV4 472 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 GAGE12JA6NER3 117 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 GAGE7O76087 117 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 GAGE12FP0CL80 117 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 GAGE12GP0CL81 117 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 GAGE12IP0CL82 117 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 FOLR3P41439 243 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 XGP55808 180 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 GAGE2BQ13066 116 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 GAGE4Q13068 117 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 RRN3P1Q2M238 152 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 GAGE2EQ4V326 116 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 SPRNQ5BIV9 151 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 ZNF562Q6V9R5 426 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 TMEM75Q8N9X5 138 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 GAGE2DQ9UEU5 116 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 MUC6Q6W4X9 2439 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 CACNA1BQ00975 2339 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 SPEGQ15772 3267 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 LY6G6EA0A0G2JKS1 128 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 CGB1A6NKQ9 187 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 FAM90A27PA6NNH2 459 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 KLF17Q5JT82 389 aaPredicted RBP6.66□□□□□ -1.34
CSMD1-213ENST00000523488 C8orf31Q8N9H6 132 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 LEAP2Q969E1 77 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 U3KQA8 63 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 SPG11Q96JI7 2443 aa6.66□□□□□ -1.34
CSMD1-213ENST00000523488 INTS1Q8N201 2190 aaKnown RBP6.66□□□□□ -1.34
CSMD1-213ENST00000523488 TRAV8-1A0A0A6YYK1 113 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms