RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 NDUFS6O75380 124 aaKnown RBP9.91□□□□□ -0.82
CPNE3-205ENST00000522240 CD5P06127 495 aa9.91□□□□□ -0.82
CPNE3-205ENST00000522240 C12orf54Q6X4T0 127 aa9.91□□□□□ -0.82
CPNE3-205ENST00000522240 SIGLEC15Q6ZMC9 328 aa9.91□□□□□ -0.82
CPNE3-205ENST00000522240 COMMD7Q86VX2 200 aa9.91□□□□□ -0.82
CPNE3-205ENST00000522240 EIF4E3Q8N5X7 224 aaKnown RBP9.91□□□□□ -0.82
CPNE3-205ENST00000522240 TXNDC17Q9BRA2 123 aa9.91□□□□□ -0.82
CPNE3-205ENST00000522240 SIGLEC8Q9NYZ4 499 aa9.91□□□□□ -0.82
CPNE3-205ENST00000522240 TRBV19A0A075B6N1 114 aa9.9□□□□□ -0.82
CPNE3-205ENST00000522240 IGHV3OR16-13A0A075B7E8 117 aa9.9□□□□□ -0.82
CPNE3-205ENST00000522240 IGHV3-74A0A0B4J1X5 117 aa9.9□□□□□ -0.82
CPNE3-205ENST00000522240 LOC102723971A0A1B0GUV8 181 aa9.9□□□□□ -0.82
CPNE3-205ENST00000522240 A0A1W2PRE2 83 aa9.9□□□□□ -0.82
CPNE3-205ENST00000522240 NBEAP1P0C6P0 100 aa9.9□□□□□ -0.82
CPNE3-205ENST00000522240 CBLN1P23435 193 aa9.9□□□□□ -0.82
CPNE3-205ENST00000522240 ZNF506Q5JVG8 444 aa9.9□□□□□ -0.82
CPNE3-205ENST00000522240 UQCC3Q6UW78 93 aa9.9□□□□□ -0.82
CPNE3-205ENST00000522240 SHISA2Q6UWI4 295 aa9.9□□□□□ -0.82
CPNE3-205ENST00000522240 SMDT1Q9H4I9 107 aa9.9□□□□□ -0.82
CPNE3-205ENST00000522240 ZNF586Q9NXT0 402 aa9.9□□□□□ -0.82
CPNE3-205ENST00000522240 VAX2Q9UIW0 290 aa9.9□□□□□ -0.82
CPNE3-205ENST00000522240 IGHV3-66A0A0C4DH42 116 aa9.89□□□□□ -0.83
CPNE3-205ENST00000522240 RBFOX3A6NFN3 312 aa9.89□□□□□ -0.83
CPNE3-205ENST00000522240 FAM74A7A6NL05 159 aa9.89□□□□□ -0.83
CPNE3-205ENST00000522240 H3BQ15 152 aa9.89□□□□□ -0.83
CPNE3-205ENST00000522240 CSN3P07498 182 aa9.89□□□□□ -0.83
CPNE3-205ENST00000522240 FOLR2P14207 255 aa9.89□□□□□ -0.83
CPNE3-205ENST00000522240 EDN2P20800 178 aa9.89□□□□□ -0.83
CPNE3-205ENST00000522240 TOR2AQ5JU69 321 aa9.89□□□□□ -0.83
CPNE3-205ENST00000522240 SAMD13Q5VXD3 122 aa9.89□□□□□ -0.83
CPNE3-205ENST00000522240 LYPD1Q8N2G4 141 aa9.89□□□□□ -0.83
CPNE3-205ENST00000522240 LINC00482Q8N8I6 264 aa9.89□□□□□ -0.83
CPNE3-205ENST00000522240 NKX6-2Q9C056 277 aaPredicted RBP9.89□□□□□ -0.83
CPNE3-205ENST00000522240 SMAD5-AS1Q9Y6J3 95 aa9.89□□□□□ -0.83
CPNE3-205ENST00000522240 MEGF8Q7Z7M0 2845 aa9.88□□□□□ -0.83
CPNE3-205ENST00000522240 PAGE4O60829 102 aa9.88□□□□□ -0.83
CPNE3-205ENST00000522240 ICAM4Q14773 271 aa9.88□□□□□ -0.83
CPNE3-205ENST00000522240 HAGHQ16775 308 aa9.88□□□□□ -0.83
CPNE3-205ENST00000522240 FAM90A2PQ658T7 463 aa9.88□□□□□ -0.83
CPNE3-205ENST00000522240 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.88□□□□□ -0.83
CPNE3-205ENST00000522240 ADAMTSL5Q6ZMM2 481 aa9.88□□□□□ -0.83
CPNE3-205ENST00000522240 TCF24Q7RTU0 167 aa9.88□□□□□ -0.83
CPNE3-205ENST00000522240 C3orf56Q8N813 242 aa9.88□□□□□ -0.83
CPNE3-205ENST00000522240 TCEAL7Q9BRU2 100 aa9.88□□□□□ -0.83
CPNE3-205ENST00000522240 SLC50A1Q9BRV3 221 aa9.88□□□□□ -0.83
CPNE3-205ENST00000522240 EIF5A2Q9GZV4 153 aaKnown RBP9.88□□□□□ -0.83
CPNE3-205ENST00000522240 MRPL18Q9H0U6 180 aaKnown RBP9.88□□□□□ -0.83
CPNE3-205ENST00000522240 YTHDF2Q9Y5A9 579 aaKnown RBP9.88□□□□□ -0.83
CPNE3-205ENST00000522240 ZNF785A8K8V0 405 aa9.87□□□□□ -0.83
CPNE3-205ENST00000522240 GGTLC3B5MD39 225 aa9.87□□□□□ -0.83
CPNE3-205ENST00000522240 NDUFB4O95168 129 aa9.87□□□□□ -0.83
CPNE3-205ENST00000522240 UBE2G2P60604 165 aa9.87□□□□□ -0.83
CPNE3-205ENST00000522240 PSG9Q00887 426 aa9.87□□□□□ -0.83
CPNE3-205ENST00000522240 MEF2BQ02080 365 aaPredicted RBP9.87□□□□□ -0.83
CPNE3-205ENST00000522240 PEA15Q15121 130 aa9.87□□□□□ -0.83
CPNE3-205ENST00000522240 DYNLRB2Q8TF09 96 aa9.87□□□□□ -0.83
CPNE3-205ENST00000522240 BLNKQ8WV28 456 aa9.87□□□□□ -0.83
CPNE3-205ENST00000522240 C17orf77Q96MU5 243 aa9.87□□□□□ -0.83
CPNE3-205ENST00000522240 NRN1Q9NPD7 142 aa9.87□□□□□ -0.83
CPNE3-205ENST00000522240 MLXQ9UH92 298 aa9.87□□□□□ -0.83
CPNE3-205ENST00000522240 C11orf94C9JXX5 98 aa9.86□□□□□ -0.83
CPNE3-205ENST00000522240 SLC17A3O00476 420 aa9.86□□□□□ -0.83
CPNE3-205ENST00000522240 PDE6DO43924 150 aa9.86□□□□□ -0.83
CPNE3-205ENST00000522240 ATP5G3P48201 142 aa9.86□□□□□ -0.83
CPNE3-205ENST00000522240 CST9LP1Q5W188 147 aa9.86□□□□□ -0.83
CPNE3-205ENST00000522240 RXFP4Q8TDU9 374 aa9.86□□□□□ -0.83
CPNE3-205ENST00000522240 Q9H3A6 140 aa9.86□□□□□ -0.83
CPNE3-205ENST00000522240 ZNF331Q9NQX6 463 aaPredicted RBP9.86□□□□□ -0.83
CPNE3-205ENST00000522240 OTORQ9NRC9 128 aa9.86□□□□□ -0.83
CPNE3-205ENST00000522240 CLEC5AQ9NY25 188 aa9.86□□□□□ -0.83
CPNE3-205ENST00000522240 TRAV2A0A0B4J234 112 aa9.85□□□□□ -0.83
CPNE3-205ENST00000522240 TRAV25A0A0B4J276 109 aa9.85□□□□□ -0.83
CPNE3-205ENST00000522240 F6UZH7 168 aa9.85□□□□□ -0.83
CPNE3-205ENST00000522240 TMEM250H0YL14 139 aa9.85□□□□□ -0.83
CPNE3-205ENST00000522240 H3BTX0 84 aa9.85□□□□□ -0.83
CPNE3-205ENST00000522240 SOCS3O14543 225 aa9.85□□□□□ -0.83
CPNE3-205ENST00000522240 CD81P60033 236 aa9.85□□□□□ -0.83
CPNE3-205ENST00000522240 LCE2CQ5TA81 110 aa9.85□□□□□ -0.83
CPNE3-205ENST00000522240 CCDC28AQ8IWP9 274 aa9.85□□□□□ -0.83
CPNE3-205ENST00000522240 ARL6IP6Q8N6S5 226 aa9.85□□□□□ -0.83
CPNE3-205ENST00000522240 C5orf17Q8NAS9 161 aa9.85□□□□□ -0.83
CPNE3-205ENST00000522240 OR2K2Q8NGT1 345 aa9.85□□□□□ -0.83
CPNE3-205ENST00000522240 MRPL53Q96EL3 112 aaKnown RBP9.85□□□□□ -0.83
CPNE3-205ENST00000522240 RARRES2Q99969 163 aa9.85□□□□□ -0.83
CPNE3-205ENST00000522240 AAMDCQ9H7C9 122 aa9.85□□□□□ -0.83
CPNE3-205ENST00000522240 PRELID1Q9Y255 219 aa9.85□□□□□ -0.83
CPNE3-205ENST00000522240 PKD1L1Q8TDX9 2849 aa9.85□□□□□ -0.83
CPNE3-205ENST00000522240 SNRPCP09234 159 aaKnown RBP9.84□□□□□ -0.83
CPNE3-205ENST00000522240 RANP62826 216 aaKnown RBP9.84□□□□□ -0.83
CPNE3-205ENST00000522240 SRSF3P84103 164 aaKnown RBP9.84□□□□□ -0.83
CPNE3-205ENST00000522240 DEFB114Q30KQ6 69 aa9.84□□□□□ -0.83
CPNE3-205ENST00000522240 C11orf52Q96A22 123 aa9.84□□□□□ -0.83
CPNE3-205ENST00000522240 TREM1Q9NP99 234 aa9.84□□□□□ -0.83
CPNE3-205ENST00000522240 PGPA6NDG6 321 aa9.83□□□□□ -0.84
CPNE3-205ENST00000522240 FAM229AH3BQW9 127 aa9.83□□□□□ -0.84
CPNE3-205ENST00000522240 ISLRO14498 428 aa9.83□□□□□ -0.84
CPNE3-205ENST00000522240 TSPAN4O14817 238 aa9.83□□□□□ -0.84
CPNE3-205ENST00000522240 SAP30O75446 220 aa9.83□□□□□ -0.84
CPNE3-205ENST00000522240 SRP19P09132 144 aaKnown RBP9.83□□□□□ -0.84
CPNE3-205ENST00000522240 INSL3P51460 131 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms