RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 Q6ZS46 218 aa14.3□□□□□ -0.12
TRAPPC9-210ENST00000521667 AAMDCQ9H7C9 122 aa14.3□□□□□ -0.12
TRAPPC9-210ENST00000521667 IER3P46695 156 aa14.29□□□□□ -0.12
TRAPPC9-210ENST00000521667 RAB9AP51151 201 aa14.29□□□□□ -0.12
TRAPPC9-210ENST00000521667 PSG9Q00887 426 aa14.29□□□□□ -0.12
TRAPPC9-210ENST00000521667 Q86TA4 180 aa14.29□□□□□ -0.12
TRAPPC9-210ENST00000521667 NUDT10Q8NFP7 164 aa14.29□□□□□ -0.12
TRAPPC9-210ENST00000521667 NUDT11Q96G61 164 aa14.29□□□□□ -0.12
TRAPPC9-210ENST00000521667 ZNF469Q96JG9 3925 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC9-210ENST00000521667 CR1P17927 2039 aa14.29□□□□□ -0.12
TRAPPC9-210ENST00000521667 TRBV6-1A0A0K0K1D8 114 aa14.29□□□□□ -0.12
TRAPPC9-210ENST00000521667 SMIM27A0A1W2PRY6 76 aa14.29□□□□□ -0.12
TRAPPC9-210ENST00000521667 GATCO43716 136 aaKnown RBP14.29□□□□□ -0.12
TRAPPC9-210ENST00000521667 IGLV2-11P01706 119 aa14.29□□□□□ -0.12
TRAPPC9-210ENST00000521667 TRAPPC1Q9Y5R8 145 aa14.29□□□□□ -0.12
TRAPPC9-210ENST00000521667 ITPR2Q14571 2701 aa14.29□□□□□ -0.12
TRAPPC9-210ENST00000521667 TRAV8-1A0A0A6YYK1 113 aa14.28□□□□□ -0.12
TRAPPC9-210ENST00000521667 CLPSL1A2RUU4 121 aa14.28□□□□□ -0.12
TRAPPC9-210ENST00000521667 K7EQM0 130 aa14.28□□□□□ -0.12
TRAPPC9-210ENST00000521667 C9orf139Q6ZV77 190 aa14.28□□□□□ -0.12
TRAPPC9-210ENST00000521667 TMEM75Q8N9X5 138 aa14.28□□□□□ -0.12
TRAPPC9-210ENST00000521667 USMG5Q96IX5 58 aa14.28□□□□□ -0.12
TRAPPC9-210ENST00000521667 SMAD5-AS1Q9Y6J3 95 aa14.28□□□□□ -0.12
TRAPPC9-210ENST00000521667 UNC79Q9P2D8 2635 aa14.28□□□□□ -0.12
TRAPPC9-210ENST00000521667 BUB3O43684 328 aa14.27□□□□□ -0.12
TRAPPC9-210ENST00000521667 CDX1P47902 265 aaPredicted RBP14.27□□□□□ -0.12
TRAPPC9-210ENST00000521667 OR5R1Q8NH85 324 aa14.27□□□□□ -0.12
TRAPPC9-210ENST00000521667 GRAMD2BQ96HH9 432 aa14.27□□□□□ -0.12
TRAPPC9-210ENST00000521667 DIRC3C9JPN6 131 aa14.27□□□□□ -0.13
TRAPPC9-210ENST00000521667 CA1P00915 261 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC9-210ENST00000521667 TCL1AP56279 114 aa14.27□□□□□ -0.13
TRAPPC9-210ENST00000521667 RPL19P84098 196 aaKnown RBP14.27□□□□□ -0.13
TRAPPC9-210ENST00000521667 TMEM183AQ8IXX5 376 aa14.27□□□□□ -0.13
TRAPPC9-210ENST00000521667 ZNF580Q9UK33 172 aa14.27□□□□□ -0.13
TRAPPC9-210ENST00000521667 HECTD1Q9ULT8 2610 aa14.26□□□□□ -0.13
TRAPPC9-210ENST00000521667 M0R3E3 92 aa14.26□□□□□ -0.13
TRAPPC9-210ENST00000521667 ZNF253O75346 499 aa14.26□□□□□ -0.13
TRAPPC9-210ENST00000521667 ARL3P36405 182 aa14.26□□□□□ -0.13
TRAPPC9-210ENST00000521667 PRNTQ86SH4 94 aa14.26□□□□□ -0.13
TRAPPC9-210ENST00000521667 ZNF492Q9P255 531 aa14.26□□□□□ -0.13
TRAPPC9-210ENST00000521667 FASNP49327 2511 aaKnown RBP14.26□□□□□ -0.13
TRAPPC9-210ENST00000521667 IGLV1-40P01703 118 aa14.25□□□□□ -0.13
TRAPPC9-210ENST00000521667 S100A8P05109 93 aa14.25□□□□□ -0.13
TRAPPC9-210ENST00000521667 PF4V1P10720 104 aa14.25□□□□□ -0.13
TRAPPC9-210ENST00000521667 CFHR3Q02985 330 aa14.25□□□□□ -0.13
TRAPPC9-210ENST00000521667 CYB5R2Q6BCY4 276 aa14.25□□□□□ -0.13
TRAPPC9-210ENST00000521667 METTL26Q96S19 204 aa14.25□□□□□ -0.13
TRAPPC9-210ENST00000521667 CSN1S1P47710 185 aa14.25□□□□□ -0.13
TRAPPC9-210ENST00000521667 PSG3Q16557 428 aa14.25□□□□□ -0.13
TRAPPC9-210ENST00000521667 WFDC11Q8NEX6 87 aa14.25□□□□□ -0.13
TRAPPC9-210ENST00000521667 KLK15Q9H2R5 256 aa14.25□□□□□ -0.13
TRAPPC9-210ENST00000521667 PRRC2AP48634 2157 aaKnown RBP14.24□□□□□ -0.13
TRAPPC9-210ENST00000521667 C1orf194Q5T5A4 169 aa14.24□□□□□ -0.13
TRAPPC9-210ENST00000521667 LINC00322Q6ZN03 302 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC9-210ENST00000521667 ARL6IP6Q8N6S5 226 aa14.24□□□□□ -0.13
TRAPPC9-210ENST00000521667 PSG8Q9UQ74 426 aa14.24□□□□□ -0.13
TRAPPC9-210ENST00000521667 ZFP30Q9Y2G7 519 aa14.24□□□□□ -0.13
TRAPPC9-210ENST00000521667 A0A087X0K7 114 aa14.24□□□□□ -0.13
TRAPPC9-210ENST00000521667 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.24□□□□□ -0.13
TRAPPC9-210ENST00000521667 SERTM2A0A1B0GWG4 89 aa14.24□□□□□ -0.13
TRAPPC9-210ENST00000521667 C19orf71A6NCJ1 209 aa14.24□□□□□ -0.13
TRAPPC9-210ENST00000521667 CBLN1P23435 193 aa14.24□□□□□ -0.13
TRAPPC9-210ENST00000521667 GFI1BQ5VTD9 330 aa14.24□□□□□ -0.13
TRAPPC9-210ENST00000521667 Q6YL49 198 aa14.24□□□□□ -0.13
TRAPPC9-210ENST00000521667 C12orf57Q99622 126 aa14.24□□□□□ -0.13
TRAPPC9-210ENST00000521667 IZUMO1RA6ND01 250 aa14.23□□□□□ -0.13
TRAPPC9-210ENST00000521667 IFITM10A6NMD0 228 aa14.23□□□□□ -0.13
TRAPPC9-210ENST00000521667 ZNF785A8K8V0 405 aa14.23□□□□□ -0.13
TRAPPC9-210ENST00000521667 SPINK4O60575 86 aa14.23□□□□□ -0.13
TRAPPC9-210ENST00000521667 HIST3H2BBQ8N257 126 aa14.23□□□□□ -0.13
TRAPPC9-210ENST00000521667 CIARTQ8N365 385 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC9-210ENST00000521667 TSKUQ8WUA8 353 aa14.23□□□□□ -0.13
TRAPPC9-210ENST00000521667 PRSS22Q9GZN4 317 aa14.23□□□□□ -0.13
TRAPPC9-210ENST00000521667 RPP21Q9H633 154 aaKnown RBP14.23□□□□□ -0.13
TRAPPC9-210ENST00000521667 VPREB3Q9UKI3 123 aa14.23□□□□□ -0.13
TRAPPC9-210ENST00000521667 U3KQE9 123 aa14.23□□□□□ -0.13
TRAPPC9-210ENST00000521667 IGHV3-66A0A0C4DH42 116 aa14.22□□□□□ -0.13
TRAPPC9-210ENST00000521667 A0A0G2JLM5 398 aa14.22□□□□□ -0.13
TRAPPC9-210ENST00000521667 XKRY2A2RUG3 117 aa14.22□□□□□ -0.13
TRAPPC9-210ENST00000521667 TRBV12-3P01733 135 aa14.22□□□□□ -0.13
TRAPPC9-210ENST00000521667 APOHP02749 345 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC9-210ENST00000521667 FRMD6-AS1P0C7T7 363 aa14.22□□□□□ -0.13
TRAPPC9-210ENST00000521667 SLC35B1P78383 322 aa14.22□□□□□ -0.13
TRAPPC9-210ENST00000521667 DAZAP1Q96EP5 407 aaKnown RBP14.22□□□□□ -0.13
TRAPPC9-210ENST00000521667 ZNF331Q9NQX6 463 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC9-210ENST00000521667 AKAP9Q99996 3911 aa14.22□□□□□ -0.13
TRAPPC9-210ENST00000521667 ITPR3Q14573 2671 aa14.22□□□□□ -0.13
TRAPPC9-210ENST00000521667 PCP4L1A6NKN8 68 aa14.22□□□□□ -0.13
TRAPPC9-210ENST00000521667 ZNF207O43670 478 aaKnown RBP14.22□□□□□ -0.13
TRAPPC9-210ENST00000521667 P01737 135 aa14.22□□□□□ -0.13
TRAPPC9-210ENST00000521667 IGHV3-11P01762 117 aa14.22□□□□□ -0.13
TRAPPC9-210ENST00000521667 TMEM95Q3KNT9 176 aa14.22□□□□□ -0.13
TRAPPC9-210ENST00000521667 COX19Q49B96 90 aa14.22□□□□□ -0.13
TRAPPC9-210ENST00000521667 COA6Q5JTJ3 125 aaKnown RBP14.22□□□□□ -0.13
TRAPPC9-210ENST00000521667 GNB1LQ9BYB4 327 aa14.22□□□□□ -0.13
TRAPPC9-210ENST00000521667 MRPL18Q9H0U6 180 aaKnown RBP14.22□□□□□ -0.13
TRAPPC9-210ENST00000521667 NAT8BQ9UHF3 227 aa14.22□□□□□ -0.13
TRAPPC9-210ENST00000521667 SNURFLB1AK76 121 aa14.21□□□□□ -0.13
TRAPPC9-210ENST00000521667 NDUFA4O00483 81 aa14.21□□□□□ -0.13
TRAPPC9-210ENST00000521667 PRB4P10163 310 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms