RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 TRBV19A0A075B6N1 114 aa7.34□□□□□ -1.23
CLN8-202ENST00000517514 OR10J4P0C629 311 aa7.34□□□□□ -1.23
CLN8-202ENST00000517514 HIST1H1EP10412 219 aaKnown RBP7.34□□□□□ -1.23
CLN8-202ENST00000517514 DEFB1P60022 68 aa7.34□□□□□ -1.23
CLN8-202ENST00000517514 EIF5AP63241 154 aaKnown RBP7.34□□□□□ -1.23
CLN8-202ENST00000517514 AKR1C8PQ5T2L2 129 aa7.34□□□□□ -1.23
CLN8-202ENST00000517514 PAXXQ9BUH6 204 aa7.34□□□□□ -1.23
CLN8-202ENST00000517514 OR51M1Q9H341 326 aa7.34□□□□□ -1.23
CLN8-202ENST00000517514 HRH4Q9H3N8 390 aa7.34□□□□□ -1.23
CLN8-202ENST00000517514 UBQLN2Q9UHD9 624 aa7.34□□□□□ -1.23
CLN8-202ENST00000517514 FBN3Q75N90 2809 aa7.34□□□□□ -1.23
CLN8-202ENST00000517514 COL7A1Q02388 2944 aa7.33□□□□□ -1.24
CLN8-202ENST00000517514 CTXND1A0A1B0GTU2 59 aa7.33□□□□□ -1.24
CLN8-202ENST00000517514 A0A1W2PPV4 95 aa7.33□□□□□ -1.24
CLN8-202ENST00000517514 OR4C46A6NHA9 309 aa7.33□□□□□ -1.24
CLN8-202ENST00000517514 UMAD1C9J7I0 102 aa7.33□□□□□ -1.24
CLN8-202ENST00000517514 DNASE2O00115 360 aaPredicted RBP7.33□□□□□ -1.24
CLN8-202ENST00000517514 ZNF688P0C7X2 276 aa7.33□□□□□ -1.24
CLN8-202ENST00000517514 ARL14EPLP0DKL9 152 aa7.33□□□□□ -1.24
CLN8-202ENST00000517514 PRB4P10163 310 aaPredicted RBP7.33□□□□□ -1.24
CLN8-202ENST00000517514 ATF4P18848 351 aaPredicted RBP7.33□□□□□ -1.24
CLN8-202ENST00000517514 S100A7P31151 101 aa7.33□□□□□ -1.24
CLN8-202ENST00000517514 CD81P60033 236 aa7.33□□□□□ -1.24
CLN8-202ENST00000517514 KHDC3LQ587J8 217 aa7.33□□□□□ -1.24
CLN8-202ENST00000517514 ALKAL2Q6UX46 152 aa7.33□□□□□ -1.24
CLN8-202ENST00000517514 S100A7AQ86SG5 101 aa7.33□□□□□ -1.24
CLN8-202ENST00000517514 RNF182Q8N6D2 247 aa7.33□□□□□ -1.24
CLN8-202ENST00000517514 FAM213BQ8TBF2 198 aa7.33□□□□□ -1.24
CLN8-202ENST00000517514 RNF141Q8WVD5 230 aa7.33□□□□□ -1.24
CLN8-202ENST00000517514 MBD3L1Q8WWY6 194 aa7.33□□□□□ -1.24
CLN8-202ENST00000517514 PHYHIPLQ96FC7 376 aa7.33□□□□□ -1.24
CLN8-202ENST00000517514 ACTR3CQ9C0K3 210 aaPredicted RBP7.33□□□□□ -1.24
CLN8-202ENST00000517514 TMPRSS5Q9H3S3 457 aa7.33□□□□□ -1.24
CLN8-202ENST00000517514 ZNF331Q9NQX6 463 aaPredicted RBP7.33□□□□□ -1.24
CLN8-202ENST00000517514 ISLRO14498 428 aa7.32□□□□□ -1.24
CLN8-202ENST00000517514 OR7C2O60412 319 aa7.32□□□□□ -1.24
CLN8-202ENST00000517514 NBEAP1P0C6P0 100 aa7.32□□□□□ -1.24
CLN8-202ENST00000517514 C4BPBP20851 252 aa7.32□□□□□ -1.24
CLN8-202ENST00000517514 GCHFRP30047 84 aa7.32□□□□□ -1.24
CLN8-202ENST00000517514 PSMB3P49720 205 aa7.32□□□□□ -1.24
CLN8-202ENST00000517514 FGF8P55075 233 aaPredicted RBP7.32□□□□□ -1.24
CLN8-202ENST00000517514 DEFB131AP59861 70 aa7.32□□□□□ -1.24
CLN8-202ENST00000517514 PAFAH1B2P68402 229 aa7.32□□□□□ -1.24
CLN8-202ENST00000517514 GDF5OSQ5U4N7 250 aa7.32□□□□□ -1.24
CLN8-202ENST00000517514 LCN15Q6UWW0 184 aa7.32□□□□□ -1.24
CLN8-202ENST00000517514 PQLC2Q6ZP29 291 aa7.32□□□□□ -1.24
CLN8-202ENST00000517514 APRG1Q8IVJ8 170 aa7.32□□□□□ -1.24
CLN8-202ENST00000517514 DEFB125Q8N687 156 aa7.32□□□□□ -1.24
CLN8-202ENST00000517514 BLNKQ8WV28 456 aa7.32□□□□□ -1.24
CLN8-202ENST00000517514 FAM110AQ9BQ89 295 aa7.32□□□□□ -1.24
CLN8-202ENST00000517514 RNF24Q9Y225 148 aa7.32□□□□□ -1.24
CLN8-202ENST00000517514 MAP1LC3B2A6NCE7 125 aa7.31□□□□□ -1.24
CLN8-202ENST00000517514 ZNF253O75346 499 aa7.31□□□□□ -1.24
CLN8-202ENST00000517514 MEOX2P50222 304 aa7.31□□□□□ -1.24
CLN8-202ENST00000517514 TAS2R45P59539 299 aa7.31□□□□□ -1.24
CLN8-202ENST00000517514 UBE2L3P68036 154 aaKnown RBP7.31□□□□□ -1.24
CLN8-202ENST00000517514 CCL20P78556 96 aa7.31□□□□□ -1.24
CLN8-202ENST00000517514 IFITM2Q01629 132 aa7.31□□□□□ -1.24
CLN8-202ENST00000517514 PSMG4Q5JS54 123 aa7.31□□□□□ -1.24
CLN8-202ENST00000517514 DPPA3Q6W0C5 159 aa7.31□□□□□ -1.24
CLN8-202ENST00000517514 LINC00322Q6ZN03 302 aaPredicted RBP7.31□□□□□ -1.24
CLN8-202ENST00000517514 EXOC3-AS1Q8N2X6 119 aa7.31□□□□□ -1.24
CLN8-202ENST00000517514 C16orf92Q96LL3 132 aa7.31□□□□□ -1.24
CLN8-202ENST00000517514 MAP1LC3BQ9GZQ8 125 aa7.31□□□□□ -1.24
CLN8-202ENST00000517514 RBMY1BA6NDE4 496 aaKnown RBP7.3□□□□□ -1.24
CLN8-202ENST00000517514 RBMY1EA6NEQ0 496 aaKnown RBP7.3□□□□□ -1.24
CLN8-202ENST00000517514 KNCNA6PVL3 124 aa7.3□□□□□ -1.24
CLN8-202ENST00000517514 ZNF705FA8MVS1 300 aaPredicted RBP7.3□□□□□ -1.24
CLN8-202ENST00000517514 OR11H12B2RN74 326 aa7.3□□□□□ -1.24
CLN8-202ENST00000517514 PRAC2D3DTV9 90 aa7.3□□□□□ -1.24
CLN8-202ENST00000517514 F6UB75 175 aa7.3□□□□□ -1.24
CLN8-202ENST00000517514 M0R3E3 92 aa7.3□□□□□ -1.24
CLN8-202ENST00000517514 CXorf1O96002 111 aa7.3□□□□□ -1.24
CLN8-202ENST00000517514 RBMY1DP0C7P1 496 aaKnown RBP7.3□□□□□ -1.24
CLN8-202ENST00000517514 RAB5CP51148 216 aa7.3□□□□□ -1.24
CLN8-202ENST00000517514 PDE6HQ13956 83 aa7.3□□□□□ -1.24
CLN8-202ENST00000517514 PSG3Q16557 428 aa7.3□□□□□ -1.24
CLN8-202ENST00000517514 GUK1Q16774 197 aa7.3□□□□□ -1.24
CLN8-202ENST00000517514 EIF5AL1Q6IS14 154 aaKnown RBP7.3□□□□□ -1.24
CLN8-202ENST00000517514 TEX261Q6UWH6 196 aa7.3□□□□□ -1.24
CLN8-202ENST00000517514 ZNF680Q8NEM1 530 aa7.3□□□□□ -1.24
CLN8-202ENST00000517514 LINC00052Q96N35 136 aa7.3□□□□□ -1.24
CLN8-202ENST00000517514 SLC50A1Q9BRV3 221 aa7.3□□□□□ -1.24
CLN8-202ENST00000517514 ZMAT5Q9UDW3 170 aaKnown RBP7.3□□□□□ -1.24
CLN8-202ENST00000517514 YTHDF2Q9Y5A9 579 aaKnown RBP7.3□□□□□ -1.24
CLN8-202ENST00000517514 TRAV1-1A0A0B4J248 108 aa7.29□□□□□ -1.24
CLN8-202ENST00000517514 A8MTW9 85 aa7.29□□□□□ -1.24
CLN8-202ENST00000517514 A8MZ25 164 aa7.29□□□□□ -1.24
CLN8-202ENST00000517514 H2AFB1P0C5Y9 115 aa7.29□□□□□ -1.24
CLN8-202ENST00000517514 IGHV4-30-4P0DP06 118 aa7.29□□□□□ -1.24
CLN8-202ENST00000517514 DEFA6Q01524 100 aa7.29□□□□□ -1.24
CLN8-202ENST00000517514 ICAM4Q14773 271 aa7.29□□□□□ -1.24
CLN8-202ENST00000517514 GTSCR1Q86UQ5 136 aa7.29□□□□□ -1.24
CLN8-202ENST00000517514 SFT2D1Q8WV19 159 aa7.29□□□□□ -1.24
CLN8-202ENST00000517514 Q9H3A6 140 aa7.29□□□□□ -1.24
CLN8-202ENST00000517514 NBEAL2Q6ZNJ1 2754 aa7.29□□□□□ -1.24
CLN8-202ENST00000517514 A0A0J9YX75 114 aa7.28□□□□□ -1.24
CLN8-202ENST00000517514 A0A1B0GV50 99 aa7.28□□□□□ -1.24
CLN8-202ENST00000517514 GGTLC3B5MD39 225 aa7.28□□□□□ -1.24
CLN8-202ENST00000517514 H3BMM0 161 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms