RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 NCBP2LA6PVI3 153 aaKnown RBP2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 C11orf94C9JXX5 98 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 PPP5D1E7EU14 171 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 H3BUA1 57 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 M0R143 59 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 RRHO14718 337 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 OVOL1O14753 267 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 SPRY2O43597 315 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 SSSCA1O60232 199 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 NUPR1O60356 82 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 PGLYRP1O75594 196 aaPredicted RBP2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 KBTBD11O94819 623 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 HPRT1P00492 218 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 IGHG4P01861 327 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 HBE1P02100 147 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 MBP02144 154 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 IGKV1-16P04430 117 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 CRYGBP07316 175 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 IGKV1-13P0DP09 117 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 ZNF25P17030 456 aaPredicted RBP2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 F2RP25116 425 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 CTRLP40313 264 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 REG1BP48304 166 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 ERVFC1-1P60608 527 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 HERV-K104P61576 105 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 RPS16P62249 146 aaKnown RBP2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 RPL23P62829 140 aaKnown RBP2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 RBX1P62877 108 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 SLC35B1P78383 322 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 CX3CL1P78423 397 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 ID3Q02535 119 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 BAXQ07812 192 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 FOXE3Q13461 319 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 ZNF266Q14584 549 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 PSG5Q15238 335 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 MMDQ15546 238 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 KLK9Q2XQG4 91 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 VMA21Q3ZAQ7 101 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 ABCA11PQ4W5N1 156 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 RPL39P5Q59GN2 51 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 CXorf66Q5JRM2 361 aaPredicted RBP2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 AKR1C8PQ5T2L2 129 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 ZNF818PQ6ZRF7 136 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 Q6ZWC4 215 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 PPP1R27Q86WC6 154 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 ARL6IP6Q8N6S5 226 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 OR11H1Q8NG94 326 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 OR5C1Q8NGR4 320 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 TMEM167AQ8TBQ9 72 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 GNPNAT1Q96EK6 184 aaPredicted RBP2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 DAZAP1Q96EP5 407 aaKnown RBP2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 ATP5SQ99766 215 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 PSMG3Q9BT73 122 aaPredicted RBP2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 PARD6GQ9BYG4 376 aaPredicted RBP2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 TMEM222Q9H0R3 208 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 VSIRQ9H7M9 311 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 SLC35D1Q9NTN3 355 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 LINC00846Q9NV44 126 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 FKBP11Q9NYL4 201 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 BET1LQ9NYM9 111 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 FAM30AQ9NZY2 134 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 NAGKQ9UJ70 344 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 KLK9Q9UKQ9 250 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 GOLT1BQ9Y3E0 138 aa2.27□□□□□ -2.05
SCARNA13-201ENST00000516672 IGHV7-81A0A0B4J1V7 117 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 IGHV3-72A0A0B4J1Y9 119 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 MAP1LC3B2A6NCE7 125 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 SRRM4A7MD48 611 aaKnown RBP2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 LINC00473A8K010 186 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 INS-IGF2F8WCM5 200 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 H0Y980 276 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 MPPED1O15442 326 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 FCGR3BO75015 233 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 CST7O76096 145 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 ACTL6BO94805 426 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 TOMM40O96008 361 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 IGKV1-39P01597 117 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 IGLV1-51P01701 117 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 IGLV1-40P01703 118 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 IGLV2-23P01705 113 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 IGKV1D-39P04432 117 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 RPLP1P05386 114 aaKnown RBP2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 SERPINE2P07093 398 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 ESDP10768 282 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 VDAC1P21796 283 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 NPPCP23582 126 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 CD24P25063 80 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 PSMB8P28062 276 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 PPIFP30405 207 aaKnown RBP2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 NKX2-1P43699 371 aaPredicted RBP2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 CDKN1BP46527 198 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 GALR1P47211 349 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 FGF8P55075 233 aaPredicted RBP2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 ATP5IP56385 69 aaPredicted RBP2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 BRWD1-AS2P59051 145 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 FXYD4P59646 89 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 SELENOTP62341 195 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 RAB11AP62491 216 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 SRPXP78539 464 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 CFHR3Q02985 330 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms