RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 SIGLEC15Q6ZMC9 328 aa5.85□□□□□ -1.47
SCARNA20.1-201ENST00000516009 EXOC3-AS1Q8N2X6 119 aa5.85□□□□□ -1.47
SCARNA20.1-201ENST00000516009 LINC01006Q8NI28 216 aa5.85□□□□□ -1.47
SCARNA20.1-201ENST00000516009 CMTM2Q8TAZ6 248 aa5.85□□□□□ -1.47
SCARNA20.1-201ENST00000516009 C2CD4CQ8TF44 421 aa5.85□□□□□ -1.47
SCARNA20.1-201ENST00000516009 C17orf77Q96MU5 243 aa5.85□□□□□ -1.47
SCARNA20.1-201ENST00000516009 DAZ1Q9NQZ3 744 aaKnown RBP5.85□□□□□ -1.47
SCARNA20.1-201ENST00000516009 EPDR1Q9UM22 224 aa5.85□□□□□ -1.47
SCARNA20.1-201ENST00000516009 RPH3ALQ9UNE2 315 aa5.85□□□□□ -1.47
SCARNA20.1-201ENST00000516009 UFC1Q9Y3C8 167 aa5.85□□□□□ -1.47
SCARNA20.1-201ENST00000516009 IGHV7-4-1A0A0J9YVY3 117 aa5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 SLC17A3O00476 420 aa5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 ZNF253O75346 499 aa5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 TCRAP04437 139 aa5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 S100A9P06702 114 aaKnown RBP5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 BMI1P35226 326 aa5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 MEOX2P50222 304 aa5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 TAS2R60P59551 318 aa5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 GNG5P63218 68 aa5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 TM4SF20Q53R12 229 aa5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 CENPWQ5EE01 88 aa5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 TCTEX1D4Q5JR98 221 aa5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 REC114Q7Z4M0 266 aa5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 KLHL30-AS1Q8NEE0 82 aa5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 WIPF2Q8TF74 440 aaPredicted RBP5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 C4orf3Q8WVX3 66 aa5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 GLMPQ8WWB7 406 aa5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 WFDC12Q8WWY7 111 aa5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 DPF1Q92782 380 aa5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 ATG101Q9BSB4 218 aa5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 SMCO4Q9NRQ5 59 aa5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 PRELID1Q9Y255 219 aa5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 SMAD5-AS1Q9Y6J3 95 aa5.84□□□□□ -1.47
SCARNA20.1-201ENST00000516009 TRBV20OR9-2A0A075B6H5 130 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 A0A087WWC5 75 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 PGPEP1LA6NFU8 196 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 K7EQM0 130 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 DNASE2O00115 360 aaPredicted RBP5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 HAX1O00165 279 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 LGALS9O00182 355 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 TSPAN4O14817 238 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 MT-ND4LP03901 98 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 HOXD3P31249 432 aaPredicted RBP5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 CSN1S1P47710 185 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 UBE2G1P62253 170 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 TMEM183BQ1AE95 376 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 TMEM88Q6PEY1 159 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 LINC01551Q86U37 167 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 C1QL4Q86Z23 238 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 ARL6IP6Q8N6S5 226 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 OCC1Q8TAD7 63 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 SLC50A1Q9BRV3 221 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 RHPN1-AS1Q9BWJ2 59 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 CTDSP1Q9GZU7 261 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 SMPXQ9UHP9 88 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 RNF114Q9Y508 228 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 LY96Q9Y6Y9 160 aa5.83□□□□□ -1.48
SCARNA20.1-201ENST00000516009 FN1P02751 2386 aaKnown RBP5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 CUBNO60494 3623 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 TRAV34A0A0B4J273 112 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 SERTM2A0A1B0GWG4 89 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 TMEM213A2RRL7 107 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 A8MWP6 167 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 LINC01619G3V211 115 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 M0R3E3 92 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 ISLRO14498 428 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 CD28P10747 220 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 SYNJ2BPP57105 145 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 DEFB136Q30KP8 78 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 RNF212Q495C1 297 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 C18orf65Q6ZTR6 163 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 C8orf86Q6ZUL3 223 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 GOLT1AQ6ZVE7 132 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 CBLN2Q8IUK8 224 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 C11orf44Q8N8P7 122 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 OR11H1Q8NG94 326 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 OR1N2Q8NGR9 330 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 ISOC2Q96AB3 205 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 FMC1Q96HJ9 113 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 IGF2BP2-AS1Q96M15 143 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 LINC00479Q96M42 142 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 ZNF331Q9NQX6 463 aaPredicted RBP5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 TMEM242Q9NWH2 141 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 AURKAIP1Q9NWT8 199 aaPredicted RBP5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 KLF12Q9Y4X4 402 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 SETXQ7Z333 2677 aaKnown RBP5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 F8P00451 2351 aa5.82□□□□□ -1.48
SCARNA20.1-201ENST00000516009 DIRC3C9JPN6 131 aa5.81□□□□□ -1.48
SCARNA20.1-201ENST00000516009 H7BYZ3 331 aa5.81□□□□□ -1.48
SCARNA20.1-201ENST00000516009 M0QZ24 198 aa5.81□□□□□ -1.48
SCARNA20.1-201ENST00000516009 CHEK1O14757 476 aa5.81□□□□□ -1.48
SCARNA20.1-201ENST00000516009 MGST1P10620 155 aaKnown RBP5.81□□□□□ -1.48
SCARNA20.1-201ENST00000516009 SLURP1P55000 103 aa5.81□□□□□ -1.48
SCARNA20.1-201ENST00000516009 PROK1P58294 105 aa5.81□□□□□ -1.48
SCARNA20.1-201ENST00000516009 RPL11P62913 178 aaKnown RBP5.81□□□□□ -1.48
SCARNA20.1-201ENST00000516009 KLF5Q13887 457 aaPredicted RBP5.81□□□□□ -1.48
SCARNA20.1-201ENST00000516009 IGFL4Q6B9Z1 124 aa5.81□□□□□ -1.48
SCARNA20.1-201ENST00000516009 TCF24Q7RTU0 167 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms