RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 TRAV12-2A0A075B6T6 113 aa8.95□□□□□ -0.98
TRIM41-209ENST00000515834 REG4Q9BYZ8 158 aa8.95□□□□□ -0.98
TRIM41-209ENST00000515834 Q9HAA7 133 aa8.95□□□□□ -0.98
TRIM41-209ENST00000515834 TRAV8-1A0A0A6YYK1 113 aa8.95□□□□□ -0.98
TRIM41-209ENST00000515834 UBE2BP63146 152 aa8.94□□□□□ -0.98
TRIM41-209ENST00000515834 IGKV1OR2-108A0A075B7D4 117 aa8.94□□□□□ -0.98
TRIM41-209ENST00000515834 ESDP10768 282 aa8.94□□□□□ -0.98
TRIM41-209ENST00000515834 PRTN3P24158 256 aa8.94□□□□□ -0.98
TRIM41-209ENST00000515834 UBE2E1P51965 193 aa8.94□□□□□ -0.98
TRIM41-209ENST00000515834 SUPT4H1P63272 117 aaKnown RBP8.94□□□□□ -0.98
TRIM41-209ENST00000515834 TRAV8-3A0A0A6YYJ7 113 aa8.94□□□□□ -0.98
TRIM41-209ENST00000515834 A8MWV9 139 aa8.94□□□□□ -0.98
TRIM41-209ENST00000515834 TIMM21Q9BVV7 248 aa8.94□□□□□ -0.98
TRIM41-209ENST00000515834 IGKV1-5P01602 117 aa8.94□□□□□ -0.98
TRIM41-209ENST00000515834 GAGE2EQ4V326 116 aa8.94□□□□□ -0.98
TRIM41-209ENST00000515834 GAGE2DQ9UEU5 116 aa8.94□□□□□ -0.98
TRIM41-209ENST00000515834 A0A0J9YY99 117 aa8.94□□□□□ -0.98
TRIM41-209ENST00000515834 PMVKQ15126 192 aa8.94□□□□□ -0.98
TRIM41-209ENST00000515834 TP53BP1Q12888 1972 aaPredicted RBP8.94□□□□□ -0.98
TRIM41-209ENST00000515834 IGKV2D-24A0A075B6R9 120 aa8.93□□□□□ -0.98
TRIM41-209ENST00000515834 MYMXA0A1B0GTQ4 84 aa8.93□□□□□ -0.98
TRIM41-209ENST00000515834 NXPH4O95158 308 aa8.93□□□□□ -0.98
TRIM41-209ENST00000515834 RBMY1FQ15415 496 aaKnown RBP8.93□□□□□ -0.98
TRIM41-209ENST00000515834 WFDC1Q9HC57 220 aa8.93□□□□□ -0.98
TRIM41-209ENST00000515834 DMRT1Q9Y5R6 373 aa8.93□□□□□ -0.98
TRIM41-209ENST00000515834 TMEM256Q8N2U0 113 aa8.93□□□□□ -0.98
TRIM41-209ENST00000515834 LIME1Q9H400 295 aa8.93□□□□□ -0.98
TRIM41-209ENST00000515834 ARID2Q68CP9 1835 aa8.93□□□□□ -0.98
TRIM41-209ENST00000515834 MLANAQ16655 118 aa8.93□□□□□ -0.98
TRIM41-209ENST00000515834 MPDZO75970 2070 aa8.93□□□□□ -0.98
TRIM41-209ENST00000515834 NDUFS5O43920 106 aa8.93□□□□□ -0.98
TRIM41-209ENST00000515834 FAM90A2PQ658T7 463 aa8.93□□□□□ -0.98
TRIM41-209ENST00000515834 CHCHD1Q96BP2 118 aaKnown RBP8.93□□□□□ -0.98
TRIM41-209ENST00000515834 RNF126Q9BV68 326 aa8.93□□□□□ -0.98
TRIM41-209ENST00000515834 IGHV2-70DA0A0C4DH43 119 aa8.93□□□□□ -0.98
TRIM41-209ENST00000515834 WDR83OSQ9Y284 106 aa8.93□□□□□ -0.98
TRIM41-209ENST00000515834 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.92□□□□□ -0.98
TRIM41-209ENST00000515834 KLF5Q13887 457 aaPredicted RBP8.92□□□□□ -0.98
TRIM41-209ENST00000515834 LINC00473A8K010 186 aa8.92□□□□□ -0.98
TRIM41-209ENST00000515834 TMEM158Q8WZ71 300 aa8.92□□□□□ -0.98
TRIM41-209ENST00000515834 LOC285556D6RIA3 1793 aa8.92□□□□□ -0.98
TRIM41-209ENST00000515834 ANGP03950 147 aaKnown RBP8.92□□□□□ -0.98
TRIM41-209ENST00000515834 ZNF479Q96JC4 524 aa8.92□□□□□ -0.98
TRIM41-209ENST00000515834 NAA38Q9BRA0 125 aaKnown RBP8.92□□□□□ -0.98
TRIM41-209ENST00000515834 GNB1LQ9BYB4 327 aa8.92□□□□□ -0.98
TRIM41-209ENST00000515834 RNF222A6NCQ9 220 aa8.92□□□□□ -0.98
TRIM41-209ENST00000515834 ZNRF2Q8NHG8 242 aa8.92□□□□□ -0.98
TRIM41-209ENST00000515834 SPOCK3Q9BQ16 436 aa8.92□□□□□ -0.98
TRIM41-209ENST00000515834 C5orf63A6NC05 138 aa8.91□□□□□ -0.98
TRIM41-209ENST00000515834 TAL2Q16559 108 aa8.91□□□□□ -0.98
TRIM41-209ENST00000515834 RFNGQ9Y644 331 aa8.91□□□□□ -0.98
TRIM41-209ENST00000515834 IGHG3P01860 377 aa8.91□□□□□ -0.98
TRIM41-209ENST00000515834 AMBPP02760 352 aa8.91□□□□□ -0.98
TRIM41-209ENST00000515834 ARMS2P0C7Q2 107 aa8.91□□□□□ -0.98
TRIM41-209ENST00000515834 GAS1P54826 345 aa8.91□□□□□ -0.98
TRIM41-209ENST00000515834 TRPT1Q86TN4 253 aaKnown RBP8.91□□□□□ -0.98
TRIM41-209ENST00000515834 IGKV1-16P04430 117 aa8.91□□□□□ -0.98
TRIM41-209ENST00000515834 LINC01549A6NIU2 74 aa8.91□□□□□ -0.98
TRIM41-209ENST00000515834 C2orf82Q6UX34 121 aa8.91□□□□□ -0.98
TRIM41-209ENST00000515834 LY6G5BQ8NDX9 201 aa8.91□□□□□ -0.98
TRIM41-209ENST00000515834 SBF2Q86WG5 1849 aa8.91□□□□□ -0.98
TRIM41-209ENST00000515834 FREM3P0C091 2139 aa8.9□□□□□ -0.98
TRIM41-209ENST00000515834 GAGE2AQ6NT46 116 aa8.9□□□□□ -0.98
TRIM41-209ENST00000515834 A0A087WWC5 75 aa8.9□□□□□ -0.98
TRIM41-209ENST00000515834 SRSF3P84103 164 aaKnown RBP8.9□□□□□ -0.98
TRIM41-209ENST00000515834 SAMD5Q5TGI4 173 aa8.9□□□□□ -0.98
TRIM41-209ENST00000515834 RPP25LQ8N5L8 163 aaKnown RBP8.9□□□□□ -0.98
TRIM41-209ENST00000515834 TMEM170AQ8WVE7 144 aa8.9□□□□□ -0.98
TRIM41-209ENST00000515834 CFHR2P36980 270 aa8.9□□□□□ -0.98
TRIM41-209ENST00000515834 PRSS29PA6NIE9 313 aa8.9□□□□□ -0.98
TRIM41-209ENST00000515834 HGFACQ04756 655 aa8.9□□□□□ -0.98
TRIM41-209ENST00000515834 LAIR2Q6ISS4 152 aa8.9□□□□□ -0.98
TRIM41-209ENST00000515834 SBF1O95248 1867 aa8.9□□□□□ -0.99
TRIM41-209ENST00000515834 NDUFB8O95169 186 aa8.9□□□□□ -0.99
TRIM41-209ENST00000515834 IGKV1-39P01597 117 aa8.9□□□□□ -0.99
TRIM41-209ENST00000515834 IGKV1D-39P04432 117 aa8.9□□□□□ -0.99
TRIM41-209ENST00000515834 ID3Q02535 119 aa8.9□□□□□ -0.99
TRIM41-209ENST00000515834 LAMTOR2Q9Y2Q5 125 aa8.9□□□□□ -0.99
TRIM41-209ENST00000515834 J3QLI3 93 aa8.9□□□□□ -0.99
TRIM41-209ENST00000515834 DNAJC30Q96LL9 226 aa8.9□□□□□ -0.99
TRIM41-209ENST00000515834 ANAPC13Q9BS18 74 aa8.9□□□□□ -0.99
TRIM41-209ENST00000515834 NCOR1O75376 2440 aa8.89□□□□□ -0.99
TRIM41-209ENST00000515834 OCIAD2Q56VL3 154 aa8.89□□□□□ -0.99
TRIM41-209ENST00000515834 NYNRINQ9P2P1 1898 aaKnown RBP8.89□□□□□ -0.99
TRIM41-209ENST00000515834 LYPD3O95274 346 aa8.89□□□□□ -0.99
TRIM41-209ENST00000515834 NTF4P34130 210 aa8.89□□□□□ -0.99
TRIM41-209ENST00000515834 C8orf49Q96NF6 230 aa8.89□□□□□ -0.99
TRIM41-209ENST00000515834 KIAA2026Q5HYC2 2103 aa8.89□□□□□ -0.99
TRIM41-209ENST00000515834 Q6P435 159 aa8.89□□□□□ -0.99
TRIM41-209ENST00000515834 AMN1Q8IY45 258 aa8.89□□□□□ -0.99
TRIM41-209ENST00000515834 KLHDC3Q9BQ90 382 aa8.89□□□□□ -0.99
TRIM41-209ENST00000515834 TMEM243Q9BU79 118 aa8.89□□□□□ -0.99
TRIM41-209ENST00000515834 H3BMM0 161 aa8.89□□□□□ -0.99
TRIM41-209ENST00000515834 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.89□□□□□ -0.99
TRIM41-209ENST00000515834 FAM120AOSQ5T036 256 aa8.89□□□□□ -0.99
TRIM41-209ENST00000515834 UBE2WQ96B02 151 aa8.89□□□□□ -0.99
TRIM41-209ENST00000515834 AGMATQ9BSE5 352 aa8.89□□□□□ -0.99
TRIM41-209ENST00000515834 TNFRSF6BO95407 300 aa8.88□□□□□ -0.99
TRIM41-209ENST00000515834 LRRK1Q38SD2 2015 aa8.88□□□□□ -0.99
TRIM41-209ENST00000515834 TMEM242Q9NWH2 141 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms