RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 LOC100130705A0A1B0GUX0 176 aa8.21□□□□□ -1.1
SMAD1-216ENST00000515527 CRYM-AS1A6NIL9 109 aa8.21□□□□□ -1.1
SMAD1-216ENST00000515527 CASQ2O14958 399 aaPredicted RBP8.21□□□□□ -1.1
SMAD1-216ENST00000515527 FABP1P07148 127 aa8.21□□□□□ -1.1
SMAD1-216ENST00000515527 PFN1P07737 140 aaKnown RBP8.21□□□□□ -1.1
SMAD1-216ENST00000515527 CACNG7P62955 275 aa8.21□□□□□ -1.1
SMAD1-216ENST00000515527 ANXA2RQ3ZCQ2 193 aa8.21□□□□□ -1.1
SMAD1-216ENST00000515527 NOXA1Q86UR1 476 aa8.21□□□□□ -1.1
SMAD1-216ENST00000515527 ZNF664Q8N3J9 261 aa8.21□□□□□ -1.1
SMAD1-216ENST00000515527 ZNF431Q8TF32 576 aaPredicted RBP8.21□□□□□ -1.1
SMAD1-216ENST00000515527 ARL6IP5O75915 188 aa8.2□□□□□ -1.1
SMAD1-216ENST00000515527 CHTF8P0CG12 524 aa8.2□□□□□ -1.1
SMAD1-216ENST00000515527 HSMCR30P0CW71 290 aa8.2□□□□□ -1.1
SMAD1-216ENST00000515527 LEPP41159 167 aa8.2□□□□□ -1.1
SMAD1-216ENST00000515527 AKR1C2P52895 323 aa8.2□□□□□ -1.1
SMAD1-216ENST00000515527 VWC2Q2TAL6 325 aa8.2□□□□□ -1.1
SMAD1-216ENST00000515527 C2orf50Q96LR7 162 aa8.2□□□□□ -1.1
SMAD1-216ENST00000515527 S100GP29377 79 aa8.19□□□□□ -1.1
SMAD1-216ENST00000515527 GYS2P54840 703 aa8.19□□□□□ -1.1
SMAD1-216ENST00000515527 SRSF9Q13242 221 aaKnown RBP eCLIP8.19□□□□□ -1.1
SMAD1-216ENST00000515527 TEPPQ6URK8 271 aa8.19□□□□□ -1.1
SMAD1-216ENST00000515527 TBC1D26Q86UD7 250 aa8.19□□□□□ -1.1
SMAD1-216ENST00000515527 HOGA1Q86XE5 327 aa8.19□□□□□ -1.1
SMAD1-216ENST00000515527 OR10G4Q8NGN3 311 aa8.19□□□□□ -1.1
SMAD1-216ENST00000515527 ZNF2Q9BSG1 426 aaPredicted RBP8.19□□□□□ -1.1
SMAD1-216ENST00000515527 SDF2L1Q9HCN8 221 aa8.19□□□□□ -1.1
SMAD1-216ENST00000515527 IGKV1D-37A0A075B6S9 117 aa8.18□□□□□ -1.1
SMAD1-216ENST00000515527 IGKV1-5P01602 117 aa8.18□□□□□ -1.1
SMAD1-216ENST00000515527 RPL19P84098 196 aaKnown RBP8.18□□□□□ -1.1
SMAD1-216ENST00000515527 OR10P1Q8NGE3 313 aa8.18□□□□□ -1.1
SMAD1-216ENST00000515527 OR5AP2Q8NGF4 316 aa8.18□□□□□ -1.1
SMAD1-216ENST00000515527 EHFQ9NZC4 300 aa8.18□□□□□ -1.1
SMAD1-216ENST00000515527 PLAC8Q9NZF1 115 aa8.18□□□□□ -1.1
SMAD1-216ENST00000515527 TP53TG3Q9ULZ0 132 aa8.18□□□□□ -1.1
SMAD1-216ENST00000515527 FABP12A6NFH5 140 aa8.17□□□□□ -1.1
SMAD1-216ENST00000515527 USP17L23D6RBM5 183 aa8.17□□□□□ -1.1
SMAD1-216ENST00000515527 PRSS1P07477 247 aa8.17□□□□□ -1.1
SMAD1-216ENST00000515527 TRIM16LQ309B1 348 aa8.17□□□□□ -1.1
SMAD1-216ENST00000515527 TMEM91Q6ZNR0 172 aa8.17□□□□□ -1.1
SMAD1-216ENST00000515527 TMEM170AQ8WVE7 144 aa8.17□□□□□ -1.1
SMAD1-216ENST00000515527 DIABLOQ9NR28 239 aa8.17□□□□□ -1.1
SMAD1-216ENST00000515527 LINC00854A0A1B0GVQ3 168 aa8.16□□□□□ -1.1
SMAD1-216ENST00000515527 C7orf71A4D174 169 aa8.16□□□□□ -1.1
SMAD1-216ENST00000515527 GABARAPH6UMI1 98 aa8.16□□□□□ -1.1
SMAD1-216ENST00000515527 GABARAPO95166 117 aa8.16□□□□□ -1.1
SMAD1-216ENST00000515527 SPCS3P61009 180 aa8.16□□□□□ -1.1
SMAD1-216ENST00000515527 NANOGP1Q8N7R0 232 aa8.16□□□□□ -1.1
SMAD1-216ENST00000515527 BPIFCQ8NFQ6 507 aa8.16□□□□□ -1.1
SMAD1-216ENST00000515527 OR5H2Q8NGV7 314 aa8.16□□□□□ -1.1
SMAD1-216ENST00000515527 SPACA4Q8TDM5 124 aa8.16□□□□□ -1.1
SMAD1-216ENST00000515527 UBE2WQ96B02 151 aa8.16□□□□□ -1.1
SMAD1-216ENST00000515527 ARPC5LQ9BPX5 153 aa8.16□□□□□ -1.1
SMAD1-216ENST00000515527 FXYD6Q9H0Q3 95 aa8.16□□□□□ -1.1
SMAD1-216ENST00000515527 GTSF1LQ9H1H1 148 aa8.16□□□□□ -1.1
SMAD1-216ENST00000515527 IFITM5A6NNB3 132 aa8.15□□□□□ -1.1
SMAD1-216ENST00000515527 CT45A10P0DMU9 189 aa8.15□□□□□ -1.1
SMAD1-216ENST00000515527 ORM2P19652 201 aa8.15□□□□□ -1.1
SMAD1-216ENST00000515527 MEF2DQ14814 521 aa8.15□□□□□ -1.1
SMAD1-216ENST00000515527 FAM219AQ8IW50 185 aa8.15□□□□□ -1.1
SMAD1-216ENST00000515527 PRR26Q8N8Z3 221 aa8.15□□□□□ -1.1
SMAD1-216ENST00000515527 ZNF555Q8NEP9 628 aa8.15□□□□□ -1.1
SMAD1-216ENST00000515527 Q8TAT8 98 aa8.15□□□□□ -1.1
SMAD1-216ENST00000515527 SLC45A2Q9UMX9 530 aa8.15□□□□□ -1.1
SMAD1-216ENST00000515527 SSR3Q9UNL2 185 aa8.15□□□□□ -1.1
SMAD1-216ENST00000515527 MUC17Q685J3 4493 aa8.15□□□□□ -1.1
SMAD1-216ENST00000515527 IGHV3-16A0A0C4DH30 117 aa8.14□□□□□ -1.11
SMAD1-216ENST00000515527 RGS13O14921 159 aa8.14□□□□□ -1.11
SMAD1-216ENST00000515527 SLC25A5P05141 298 aaKnown RBP8.14□□□□□ -1.11
SMAD1-216ENST00000515527 OR10J4P0C629 311 aa8.14□□□□□ -1.11
SMAD1-216ENST00000515527 S100A7P31151 101 aa8.14□□□□□ -1.11
SMAD1-216ENST00000515527 RFX2P48378 723 aa8.14□□□□□ -1.11
SMAD1-216ENST00000515527 DHRS11Q6UWP2 260 aa8.14□□□□□ -1.11
SMAD1-216ENST00000515527 LYPD6BQ8NI32 183 aa8.14□□□□□ -1.11
SMAD1-216ENST00000515527 TMEM147Q9BVK8 224 aa8.14□□□□□ -1.11
SMAD1-216ENST00000515527 KLK12Q9UKR0 248 aa8.14□□□□□ -1.11
SMAD1-216ENST00000515527 URGCP-MRPS24S4R325 110 aa8.14□□□□□ -1.11
SMAD1-216ENST00000515527 CEBPZOSA8MTT3 80 aa8.13□□□□□ -1.11
SMAD1-216ENST00000515527 PRAC2D3DTV9 90 aa8.13□□□□□ -1.11
SMAD1-216ENST00000515527 MPDU1O75352 247 aa8.13□□□□□ -1.11
SMAD1-216ENST00000515527 SEC11BP0C7V7 166 aa8.13□□□□□ -1.11
SMAD1-216ENST00000515527 RPL7P18124 248 aaKnown RBP8.13□□□□□ -1.11
SMAD1-216ENST00000515527 VAMP1P23763 118 aa8.13□□□□□ -1.11
SMAD1-216ENST00000515527 Q6ZQT7 251 aa8.13□□□□□ -1.11
SMAD1-216ENST00000515527 OR4C5Q8NGB2 326 aa8.13□□□□□ -1.11
SMAD1-216ENST00000515527 RNASE11Q8TAA1 199 aaKnown RBP8.13□□□□□ -1.11
SMAD1-216ENST00000515527 CHAC2Q8WUX2 184 aa8.13□□□□□ -1.11
SMAD1-216ENST00000515527 TMEM222Q9H0R3 208 aa8.13□□□□□ -1.11
SMAD1-216ENST00000515527 OR51M1Q9H341 326 aa8.13□□□□□ -1.11
SMAD1-216ENST00000515527 IGHV1OR15-1A0A075B7D0 117 aa8.12□□□□□ -1.11
SMAD1-216ENST00000515527 TRAV4A0A0B4J268 109 aa8.12□□□□□ -1.11
SMAD1-216ENST00000515527 PDCD5O14737 125 aa8.12□□□□□ -1.11
SMAD1-216ENST00000515527 GYG2O15488 501 aa8.12□□□□□ -1.11
SMAD1-216ENST00000515527 SCGNO76038 276 aa8.12□□□□□ -1.11
SMAD1-216ENST00000515527 BTN1A1Q13410 526 aa8.12□□□□□ -1.11
SMAD1-216ENST00000515527 GGNBP1Q5YKI7 109 aa8.12□□□□□ -1.11
SMAD1-216ENST00000515527 ODF3Q96PU9 254 aa8.12□□□□□ -1.11
SMAD1-216ENST00000515527 C1orf43Q9BWL3 253 aa8.12□□□□□ -1.11
SMAD1-216ENST00000515527 IGHV3-64A0A075B6Q5 118 aa8.11□□□□□ -1.11
SMAD1-216ENST00000515527 CFDP00746 253 aaPredicted RBP8.11□□□□□ -1.11
SMAD1-216ENST00000515527 HLA-DQA1P01909 254 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms