RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 HAGHQ16775 308 aa12.66□□□□□ -0.38
AP3S1-208ENST00000515066 MANBALQ9NQG1 85 aa12.66□□□□□ -0.38
AP3S1-208ENST00000515066 HELTA6NFD8 242 aa12.65□□□□□ -0.38
AP3S1-208ENST00000515066 GGTLC3B5MD39 225 aa12.65□□□□□ -0.38
AP3S1-208ENST00000515066 PDE6HQ13956 83 aa12.65□□□□□ -0.38
AP3S1-208ENST00000515066 DEFB114Q30KQ6 69 aa12.65□□□□□ -0.38
AP3S1-208ENST00000515066 TMEM61Q8N0U2 210 aa12.65□□□□□ -0.38
AP3S1-208ENST00000515066 RARRES2Q99969 163 aa12.65□□□□□ -0.38
AP3S1-208ENST00000515066 ARL2-SNX15V9GYD0 113 aa12.65□□□□□ -0.38
AP3S1-208ENST00000515066 IGKV3-7A0A075B6H7 116 aa12.64□□□□□ -0.39
AP3S1-208ENST00000515066 LOC102723971A0A1B0GUV8 181 aa12.64□□□□□ -0.39
AP3S1-208ENST00000515066 A0A1W2PRE2 83 aa12.64□□□□□ -0.39
AP3S1-208ENST00000515066 ZNF785A8K8V0 405 aa12.64□□□□□ -0.39
AP3S1-208ENST00000515066 SOCS3O14543 225 aa12.64□□□□□ -0.39
AP3S1-208ENST00000515066 PPT1P50897 306 aa12.64□□□□□ -0.39
AP3S1-208ENST00000515066 SRSF3P84103 164 aaKnown RBP12.64□□□□□ -0.39
AP3S1-208ENST00000515066 GUK1Q16774 197 aa12.64□□□□□ -0.39
AP3S1-208ENST00000515066 CD300EQ496F6 205 aaPredicted RBP12.64□□□□□ -0.39
AP3S1-208ENST00000515066 TOR2AQ5JU69 321 aa12.64□□□□□ -0.39
AP3S1-208ENST00000515066 DCANP1Q8TF63 244 aa12.64□□□□□ -0.39
AP3S1-208ENST00000515066 NRN1Q9NPD7 142 aa12.64□□□□□ -0.39
AP3S1-208ENST00000515066 RBFOX3A6NFN3 312 aa12.64□□□□□ -0.39
AP3S1-208ENST00000515066 ZNF253O75346 499 aa12.64□□□□□ -0.39
AP3S1-208ENST00000515066 SAP30O75446 220 aa12.64□□□□□ -0.39
AP3S1-208ENST00000515066 ATP5G3P48201 142 aa12.64□□□□□ -0.39
AP3S1-208ENST00000515066 RANP62826 216 aaKnown RBP12.64□□□□□ -0.39
AP3S1-208ENST00000515066 RPL11P62913 178 aaKnown RBP12.64□□□□□ -0.39
AP3S1-208ENST00000515066 WFDC9Q8NEX5 89 aa12.64□□□□□ -0.39
AP3S1-208ENST00000515066 DYNLRB2Q8TF09 96 aa12.64□□□□□ -0.39
AP3S1-208ENST00000515066 ZNF331Q9NQX6 463 aaPredicted RBP12.64□□□□□ -0.39
AP3S1-208ENST00000515066 CMYA5Q8N3K9 4069 aa12.63□□□□□ -0.39
AP3S1-208ENST00000515066 CD5P06127 495 aa12.63□□□□□ -0.39
AP3S1-208ENST00000515066 ICAM4Q14773 271 aa12.63□□□□□ -0.39
AP3S1-208ENST00000515066 ZNF506Q5JVG8 444 aa12.63□□□□□ -0.39
AP3S1-208ENST00000515066 COMMD7Q86VX2 200 aa12.63□□□□□ -0.39
AP3S1-208ENST00000515066 MS4A6AQ9H2W1 248 aa12.63□□□□□ -0.39
AP3S1-208ENST00000515066 Q9H3A6 140 aa12.63□□□□□ -0.39
AP3S1-208ENST00000515066 TRAV8-2A0A0B4J237 113 aa12.62□□□□□ -0.39
AP3S1-208ENST00000515066 RAB19A4D1S5 217 aa12.62□□□□□ -0.39
AP3S1-208ENST00000515066 IZUMO1RA6ND01 250 aa12.62□□□□□ -0.39
AP3S1-208ENST00000515066 IFNA1P01562 189 aa12.62□□□□□ -0.39
AP3S1-208ENST00000515066 IGLV1-51P01701 117 aa12.62□□□□□ -0.39
AP3S1-208ENST00000515066 MEOX2P50222 304 aa12.62□□□□□ -0.39
AP3S1-208ENST00000515066 CD81P60033 236 aa12.62□□□□□ -0.39
AP3S1-208ENST00000515066 MEF2BQ02080 365 aaPredicted RBP12.62□□□□□ -0.39
AP3S1-208ENST00000515066 IGFL4Q6B9Z1 124 aa12.62□□□□□ -0.39
AP3S1-208ENST00000515066 CCDC28AQ8IWP9 274 aa12.62□□□□□ -0.39
AP3S1-208ENST00000515066 EXOC3-AS1Q8N2X6 119 aa12.62□□□□□ -0.39
AP3S1-208ENST00000515066 GBGT1Q8N5D6 347 aa12.62□□□□□ -0.39
AP3S1-208ENST00000515066 AGRNO00468 2067 aa12.62□□□□□ -0.39
AP3S1-208ENST00000515066 TSPAN4O14817 238 aa12.61□□□□□ -0.39
AP3S1-208ENST00000515066 CST9LP1Q5W188 147 aa12.61□□□□□ -0.39
AP3S1-208ENST00000515066 EIF5A2Q9GZV4 153 aaKnown RBP12.61□□□□□ -0.39
AP3S1-208ENST00000515066 VAX2Q9UIW0 290 aa12.61□□□□□ -0.39
AP3S1-208ENST00000515066 C9JQL5 133 aa12.61□□□□□ -0.39
AP3S1-208ENST00000515066 C11orf94C9JXX5 98 aa12.61□□□□□ -0.39
AP3S1-208ENST00000515066 HLA-DMBP28068 263 aa12.61□□□□□ -0.39
AP3S1-208ENST00000515066 SUMO1P63165 101 aaKnown RBP12.61□□□□□ -0.39
AP3S1-208ENST00000515066 LYPD1Q8N2G4 141 aa12.61□□□□□ -0.39
AP3S1-208ENST00000515066 RXFP4Q8TDU9 374 aa12.61□□□□□ -0.39
AP3S1-208ENST00000515066 SLC50A1Q9BRV3 221 aa12.61□□□□□ -0.39
AP3S1-208ENST00000515066 OTORQ9NRC9 128 aa12.61□□□□□ -0.39
AP3S1-208ENST00000515066 K7EQG2 157 aa12.6□□□□□ -0.39
AP3S1-208ENST00000515066 M0R3E3 92 aa12.6□□□□□ -0.39
AP3S1-208ENST00000515066 CD33P20138 364 aa12.6□□□□□ -0.39
AP3S1-208ENST00000515066 TAGLN2P37802 199 aaKnown RBP12.6□□□□□ -0.39
AP3S1-208ENST00000515066 SLC7A5P1Q8MH63 180 aa12.6□□□□□ -0.39
AP3S1-208ENST00000515066 FAM24BQ8N5W8 94 aa12.6□□□□□ -0.39
AP3S1-208ENST00000515066 EIF4E3Q8N5X7 224 aaKnown RBP12.6□□□□□ -0.39
AP3S1-208ENST00000515066 RNF182Q8N6D2 247 aa12.6□□□□□ -0.39
AP3S1-208ENST00000515066 TRAV25A0A0B4J276 109 aa12.59□□□□□ -0.39
AP3S1-208ENST00000515066 PGPA6NDG6 321 aa12.59□□□□□ -0.39
AP3S1-208ENST00000515066 PSG9Q00887 426 aa12.59□□□□□ -0.39
AP3S1-208ENST00000515066 RBPMS2Q6ZRY4 209 aaKnown RBP12.59□□□□□ -0.39
AP3S1-208ENST00000515066 NKX6-2Q9C056 277 aaPredicted RBP12.59□□□□□ -0.39
AP3S1-208ENST00000515066 ISLRO14498 428 aa12.58□□□□□ -0.4
AP3S1-208ENST00000515066 TFPI2P48307 235 aa12.58□□□□□ -0.4
AP3S1-208ENST00000515066 WFDC3Q8IUB2 231 aa12.58□□□□□ -0.4
AP3S1-208ENST00000515066 C16orf92Q96LL3 132 aa12.58□□□□□ -0.4
AP3S1-208ENST00000515066 C20orf173Q96LM9 149 aa12.58□□□□□ -0.4
AP3S1-208ENST00000515066 TXNDC17Q9BRA2 123 aa12.58□□□□□ -0.4
AP3S1-208ENST00000515066 ZNF256Q9Y2P7 627 aaPredicted RBP12.58□□□□□ -0.4
AP3S1-208ENST00000515066 PRB4P10163 310 aaPredicted RBP12.57□□□□□ -0.4
AP3S1-208ENST00000515066 INSL3P51460 131 aa12.57□□□□□ -0.4
AP3S1-208ENST00000515066 C9orf66Q5T8R8 295 aa12.57□□□□□ -0.4
AP3S1-208ENST00000515066 SPAG8Q99932 426 aaPredicted RBP12.57□□□□□ -0.4
AP3S1-208ENST00000515066 AAMDCQ9H7C9 122 aa12.57□□□□□ -0.4
AP3S1-208ENST00000515066 MGAM2Q2M2H8 2515 aa12.57□□□□□ -0.4
AP3S1-208ENST00000515066 TRAV2A0A0B4J234 112 aa12.57□□□□□ -0.4
AP3S1-208ENST00000515066 SCO2A0A1W2PP80 73 aa12.57□□□□□ -0.4
AP3S1-208ENST00000515066 DNASE2O00115 360 aaPredicted RBP12.57□□□□□ -0.4
AP3S1-208ENST00000515066 GNG5P63218 68 aa12.57□□□□□ -0.4
AP3S1-208ENST00000515066 C5orf17Q8NAS9 161 aa12.57□□□□□ -0.4
AP3S1-208ENST00000515066 OR2K2Q8NGT1 345 aa12.57□□□□□ -0.4
AP3S1-208ENST00000515066 ZNF705FA8MVS1 300 aaPredicted RBP12.56□□□□□ -0.4
AP3S1-208ENST00000515066 WIPF1O43516 503 aa12.56□□□□□ -0.4
AP3S1-208ENST00000515066 SLC25A5P05141 298 aaKnown RBP12.56□□□□□ -0.4
AP3S1-208ENST00000515066 SRP19P09132 144 aaKnown RBP12.56□□□□□ -0.4
AP3S1-208ENST00000515066 IGLL1P15814 213 aa12.56□□□□□ -0.4
AP3S1-208ENST00000515066 NDUFA5Q16718 116 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms