RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 PMS2P11Q13670 270 aa8.98□□□□□ -0.97
PDLIM5-220ENST00000514830 KPRPQ5T749 579 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-220ENST00000514830 LCN15Q6UWW0 184 aa8.98□□□□□ -0.97
PDLIM5-220ENST00000514830 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.98□□□□□ -0.97
PDLIM5-220ENST00000514830 LYPD6BQ8NI32 183 aa8.98□□□□□ -0.97
PDLIM5-220ENST00000514830 FAM213BQ8TBF2 198 aa8.98□□□□□ -0.97
PDLIM5-220ENST00000514830 SLC50A1Q9BRV3 221 aa8.98□□□□□ -0.97
PDLIM5-220ENST00000514830 MAP1LC3BQ9GZQ8 125 aa8.98□□□□□ -0.97
PDLIM5-220ENST00000514830 CLEC5AQ9NY25 188 aa8.98□□□□□ -0.97
PDLIM5-220ENST00000514830 ZNF256Q9Y2P7 627 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-220ENST00000514830 NOTCH1P46531 2555 aa8.97□□□□□ -0.97
PDLIM5-220ENST00000514830 TRBV19A0A075B6N1 114 aa8.97□□□□□ -0.97
PDLIM5-220ENST00000514830 IZUMO1RA6ND01 250 aa8.97□□□□□ -0.97
PDLIM5-220ENST00000514830 H3BQ15 152 aa8.97□□□□□ -0.97
PDLIM5-220ENST00000514830 ISLRO14498 428 aa8.97□□□□□ -0.97
PDLIM5-220ENST00000514830 OR7C2O60412 319 aa8.97□□□□□ -0.97
PDLIM5-220ENST00000514830 H2AFB1P0C5Y9 115 aa8.97□□□□□ -0.97
PDLIM5-220ENST00000514830 NBEAP1P0C6P0 100 aa8.97□□□□□ -0.97
PDLIM5-220ENST00000514830 PYYP10082 97 aa8.97□□□□□ -0.97
PDLIM5-220ENST00000514830 GCHFRP30047 84 aa8.97□□□□□ -0.97
PDLIM5-220ENST00000514830 PSMB3P49720 205 aa8.97□□□□□ -0.97
PDLIM5-220ENST00000514830 CMC4P56277 68 aaPredicted RBP8.97□□□□□ -0.97
PDLIM5-220ENST00000514830 BLOC1S1P78537 153 aa8.97□□□□□ -0.97
PDLIM5-220ENST00000514830 FAM74A1Q5RGS3 127 aa8.97□□□□□ -0.97
PDLIM5-220ENST00000514830 LYPD1Q8N2G4 141 aa8.97□□□□□ -0.97
PDLIM5-220ENST00000514830 TMEM167BQ9NRX6 74 aa8.97□□□□□ -0.97
PDLIM5-220ENST00000514830 ZNF586Q9NXT0 402 aa8.97□□□□□ -0.97
PDLIM5-220ENST00000514830 UBQLN2Q9UHD9 624 aa8.97□□□□□ -0.97
PDLIM5-220ENST00000514830 ARL2-SNX15V9GYD0 113 aa8.97□□□□□ -0.97
PDLIM5-220ENST00000514830 ZNF705EA8MWA4 302 aaPredicted RBP8.96□□□□□ -0.98
PDLIM5-220ENST00000514830 TEX46H3BTG2 121 aa8.96□□□□□ -0.98
PDLIM5-220ENST00000514830 HBE1P02100 147 aa8.96□□□□□ -0.98
PDLIM5-220ENST00000514830 RPL11P62913 178 aaKnown RBP8.96□□□□□ -0.98
PDLIM5-220ENST00000514830 UBE2L3P68036 154 aaKnown RBP8.96□□□□□ -0.98
PDLIM5-220ENST00000514830 OXLD1Q5BKU9 147 aa8.96□□□□□ -0.98
PDLIM5-220ENST00000514830 ZNF767PQ75MW2 155 aa8.96□□□□□ -0.98
PDLIM5-220ENST00000514830 SFT2D1Q8WV19 159 aa8.96□□□□□ -0.98
PDLIM5-220ENST00000514830 ZNF331Q9NQX6 463 aaPredicted RBP8.96□□□□□ -0.98
PDLIM5-220ENST00000514830 DNASE2O00115 360 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-220ENST00000514830 HMGB3O15347 200 aaKnown RBP8.95□□□□□ -0.98
PDLIM5-220ENST00000514830 NDUFB4O95168 129 aa8.95□□□□□ -0.98
PDLIM5-220ENST00000514830 ID1P41134 155 aa8.95□□□□□ -0.98
PDLIM5-220ENST00000514830 PPT1P50897 306 aa8.95□□□□□ -0.98
PDLIM5-220ENST00000514830 PSG9Q00887 426 aa8.95□□□□□ -0.98
PDLIM5-220ENST00000514830 IFITM2Q01629 132 aa8.95□□□□□ -0.98
PDLIM5-220ENST00000514830 ARL6IP6Q8N6S5 226 aa8.95□□□□□ -0.98
PDLIM5-220ENST00000514830 MRPL53Q96EL3 112 aaKnown RBP8.95□□□□□ -0.98
PDLIM5-220ENST00000514830 TRAV8-2A0A0B4J237 113 aa8.94□□□□□ -0.98
PDLIM5-220ENST00000514830 A0A1W2PRE2 83 aa8.94□□□□□ -0.98
PDLIM5-220ENST00000514830 G3V4G9 280 aa8.94□□□□□ -0.98
PDLIM5-220ENST00000514830 OR10J4P0C629 311 aa8.94□□□□□ -0.98
PDLIM5-220ENST00000514830 SNRPD3P62318 126 aaKnown RBP8.94□□□□□ -0.98
PDLIM5-220ENST00000514830 GBGT1Q8N5D6 347 aa8.94□□□□□ -0.98
PDLIM5-220ENST00000514830 NKX6-2Q9C056 277 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-220ENST00000514830 PRELID1Q9Y255 219 aa8.94□□□□□ -0.98
PDLIM5-220ENST00000514830 DNAH3Q8TD57 4116 aa8.94□□□□□ -0.98
PDLIM5-220ENST00000514830 SLC17A3O00476 420 aa8.93□□□□□ -0.98
PDLIM5-220ENST00000514830 RGS13O14921 159 aa8.93□□□□□ -0.98
PDLIM5-220ENST00000514830 EIF3GO75821 320 aaKnown RBP eCLIP8.93□□□□□ -0.98
PDLIM5-220ENST00000514830 FGF8P55075 233 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-220ENST00000514830 GUCA2BQ16661 112 aa8.93□□□□□ -0.98
PDLIM5-220ENST00000514830 C16orf92Q96LL3 132 aa8.93□□□□□ -0.98
PDLIM5-220ENST00000514830 C19orf73Q9NVV2 129 aa8.93□□□□□ -0.98
PDLIM5-220ENST00000514830 SELENOKQ9Y6D0 94 aa8.93□□□□□ -0.98
PDLIM5-220ENST00000514830 IGKV3-7A0A075B6H7 116 aa8.92□□□□□ -0.98
PDLIM5-220ENST00000514830 NMBP08949 121 aa8.92□□□□□ -0.98
PDLIM5-220ENST00000514830 TAGLN2P37802 199 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-220ENST00000514830 KRTAP10-11P60412 298 aa8.92□□□□□ -0.98
PDLIM5-220ENST00000514830 ODF3L2Q3SX64 289 aa8.92□□□□□ -0.98
PDLIM5-220ENST00000514830 FAM24BQ8N5W8 94 aa8.92□□□□□ -0.98
PDLIM5-220ENST00000514830 BLNKQ8WV28 456 aa8.92□□□□□ -0.98
PDLIM5-220ENST00000514830 TXNDC17Q9BRA2 123 aa8.92□□□□□ -0.98
PDLIM5-220ENST00000514830 TCEAL7Q9BRU2 100 aa8.92□□□□□ -0.98
PDLIM5-220ENST00000514830 TMPRSS5Q9H3S3 457 aa8.92□□□□□ -0.98
PDLIM5-220ENST00000514830 AAMDCQ9H7C9 122 aa8.92□□□□□ -0.98
PDLIM5-220ENST00000514830 MAP6D1Q9H9H5 199 aa8.92□□□□□ -0.98
PDLIM5-220ENST00000514830 MANBALQ9NQG1 85 aa8.92□□□□□ -0.98
PDLIM5-220ENST00000514830 OTORQ9NRC9 128 aa8.92□□□□□ -0.98
PDLIM5-220ENST00000514830 FAM74A7A6NL05 159 aa8.91□□□□□ -0.98
PDLIM5-220ENST00000514830 TFPI2P48307 235 aa8.91□□□□□ -0.98
PDLIM5-220ENST00000514830 PSG3Q16557 428 aa8.91□□□□□ -0.98
PDLIM5-220ENST00000514830 GTSCR1Q86UQ5 136 aa8.91□□□□□ -0.98
PDLIM5-220ENST00000514830 WFDC3Q8IUB2 231 aa8.91□□□□□ -0.98
PDLIM5-220ENST00000514830 Q8N1Y9 231 aa8.91□□□□□ -0.98
PDLIM5-220ENST00000514830 Q9H3A6 140 aa8.91□□□□□ -0.98
PDLIM5-220ENST00000514830 OR11H12B2RN74 326 aa8.9□□□□□ -0.98
PDLIM5-220ENST00000514830 H3BTX0 84 aa8.9□□□□□ -0.98
PDLIM5-220ENST00000514830 NDUFS6O75380 124 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-220ENST00000514830 ZNF688P0C7X2 276 aa8.9□□□□□ -0.98
PDLIM5-220ENST00000514830 CD81P60033 236 aa8.9□□□□□ -0.98
PDLIM5-220ENST00000514830 RANP62826 216 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-220ENST00000514830 CCL20P78556 96 aa8.9□□□□□ -0.98
PDLIM5-220ENST00000514830 CLLU1Q5K131 121 aa8.9□□□□□ -0.98
PDLIM5-220ENST00000514830 CCDC28AQ8IWP9 274 aa8.9□□□□□ -0.98
PDLIM5-220ENST00000514830 RXFP4Q8TDU9 374 aa8.9□□□□□ -0.98
PDLIM5-220ENST00000514830 C20orf173Q96LM9 149 aa8.9□□□□□ -0.98
PDLIM5-220ENST00000514830 CLUHP3Q96NS8 147 aa8.9□□□□□ -0.98
PDLIM5-220ENST00000514830 YTHDF2Q9Y5A9 579 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-220ENST00000514830 A8MTW9 85 aa8.89□□□□□ -0.99
PDLIM5-220ENST00000514830 A8MZ25 164 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms