RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 RHOBP62745 196 aa8.41□□□□□ -1.06
HTT-213ENST00000513806 BPIFA4PQ86YQ2 179 aa8.41□□□□□ -1.06
HTT-213ENST00000513806 C16orf92Q96LL3 132 aa8.41□□□□□ -1.06
HTT-213ENST00000513806 MRPL32Q9BYC8 188 aaKnown RBP8.41□□□□□ -1.06
HTT-213ENST00000513806 SRD5A3Q9H8P0 318 aa8.41□□□□□ -1.06
HTT-213ENST00000513806 A0A1B0GV50 99 aa8.4□□□□□ -1.06
HTT-213ENST00000513806 A0A1W2PPV4 95 aa8.4□□□□□ -1.06
HTT-213ENST00000513806 RBMY1BA6NDE4 496 aaKnown RBP8.4□□□□□ -1.06
HTT-213ENST00000513806 RBMY1EA6NEQ0 496 aaKnown RBP8.4□□□□□ -1.06
HTT-213ENST00000513806 OR7C2O60412 319 aa8.4□□□□□ -1.06
HTT-213ENST00000513806 CD5P06127 495 aa8.4□□□□□ -1.06
HTT-213ENST00000513806 RBMY1DP0C7P1 496 aaKnown RBP8.4□□□□□ -1.06
HTT-213ENST00000513806 TPT1P13693 172 aaKnown RBP8.4□□□□□ -1.06
HTT-213ENST00000513806 RPL35AP18077 110 aaKnown RBP8.4□□□□□ -1.06
HTT-213ENST00000513806 FGF8P55075 233 aaPredicted RBP8.4□□□□□ -1.06
HTT-213ENST00000513806 SERF2P84101 59 aa8.4□□□□□ -1.06
HTT-213ENST00000513806 FAM74A1Q5RGS3 127 aa8.4□□□□□ -1.06
HTT-213ENST00000513806 AKR1C8PQ5T2L2 129 aa8.4□□□□□ -1.06
HTT-213ENST00000513806 GDF5OSQ5U4N7 250 aa8.4□□□□□ -1.06
HTT-213ENST00000513806 BAP18Q8IXM2 172 aa8.4□□□□□ -1.06
HTT-213ENST00000513806 STOML3Q8TAV4 291 aa8.4□□□□□ -1.06
HTT-213ENST00000513806 RAB24Q969Q5 203 aa8.4□□□□□ -1.06
HTT-213ENST00000513806 FXYD5Q96DB9 178 aa8.4□□□□□ -1.06
HTT-213ENST00000513806 PAXXQ9BUH6 204 aa8.4□□□□□ -1.06
HTT-213ENST00000513806 OR51M1Q9H341 326 aa8.4□□□□□ -1.06
HTT-213ENST00000513806 A0A087X0K7 114 aa8.39□□□□□ -1.07
HTT-213ENST00000513806 ZNF705FA8MVS1 300 aaPredicted RBP8.39□□□□□ -1.07
HTT-213ENST00000513806 NDUFB4O95168 129 aa8.39□□□□□ -1.07
HTT-213ENST00000513806 ZNF705DP0CH99 300 aaPredicted RBP8.39□□□□□ -1.07
HTT-213ENST00000513806 ZNF705BP0CI00 300 aaPredicted RBP8.39□□□□□ -1.07
HTT-213ENST00000513806 ARL14EPLP0DKL9 152 aa8.39□□□□□ -1.07
HTT-213ENST00000513806 S100A7P31151 101 aa8.39□□□□□ -1.07
HTT-213ENST00000513806 S100A7AQ86SG5 101 aa8.39□□□□□ -1.07
HTT-213ENST00000513806 SLC51BQ86UW2 128 aa8.39□□□□□ -1.07
HTT-213ENST00000513806 LRRC20Q8TCA0 184 aa8.39□□□□□ -1.07
HTT-213ENST00000513806 RNF141Q8WVD5 230 aa8.39□□□□□ -1.07
HTT-213ENST00000513806 PHYHIPLQ96FC7 376 aa8.39□□□□□ -1.07
HTT-213ENST00000513806 GPR82Q96P67 336 aa8.39□□□□□ -1.07
HTT-213ENST00000513806 ASCL2Q99929 193 aa8.39□□□□□ -1.07
HTT-213ENST00000513806 ACTR3CQ9C0K3 210 aaPredicted RBP8.39□□□□□ -1.07
HTT-213ENST00000513806 TMPRSS5Q9H3S3 457 aa8.39□□□□□ -1.07
HTT-213ENST00000513806 ZMAT5Q9UDW3 170 aaKnown RBP8.39□□□□□ -1.07
HTT-213ENST00000513806 TRAV2A0A0B4J234 112 aa8.38□□□□□ -1.07
HTT-213ENST00000513806 IGKV3-20P01619 116 aa8.38□□□□□ -1.07
HTT-213ENST00000513806 FRMD6-AS1P0C7T7 363 aa8.38□□□□□ -1.07
HTT-213ENST00000513806 SEC11BP0C7V7 166 aa8.38□□□□□ -1.07
HTT-213ENST00000513806 HIST1H1EP10412 219 aaKnown RBP8.38□□□□□ -1.07
HTT-213ENST00000513806 UBE2L3P68036 154 aaKnown RBP8.38□□□□□ -1.07
HTT-213ENST00000513806 KHDC3LQ587J8 217 aa8.38□□□□□ -1.07
HTT-213ENST00000513806 LCN15Q6UWW0 184 aa8.38□□□□□ -1.07
HTT-213ENST00000513806 IQCF2Q8IXL9 164 aa8.38□□□□□ -1.07
HTT-213ENST00000513806 EXOC3-AS1Q8N2X6 119 aa8.38□□□□□ -1.07
HTT-213ENST00000513806 FAM213BQ8TBF2 198 aa8.38□□□□□ -1.07
HTT-213ENST00000513806 SAT2Q96F10 170 aaPredicted RBP8.38□□□□□ -1.07
HTT-213ENST00000513806 HRH4Q9H3N8 390 aa8.38□□□□□ -1.07
HTT-213ENST00000513806 TUBA4BQ9H853 241 aa8.38□□□□□ -1.07
HTT-213ENST00000513806 TMEM14CQ9P0S9 112 aa8.38□□□□□ -1.07
HTT-213ENST00000513806 HUWE1Q7Z6Z7 4374 aaKnown RBP8.38□□□□□ -1.07
HTT-213ENST00000513806 TRBV19A0A075B6N1 114 aa8.37□□□□□ -1.07
HTT-213ENST00000513806 PRAC2D3DTV9 90 aa8.37□□□□□ -1.07
HTT-213ENST00000513806 M0R3E3 92 aa8.37□□□□□ -1.07
HTT-213ENST00000513806 ISLRO14498 428 aa8.37□□□□□ -1.07
HTT-213ENST00000513806 MBP02144 154 aa8.37□□□□□ -1.07
HTT-213ENST00000513806 STAG3L2P0CL84 134 aa8.37□□□□□ -1.07
HTT-213ENST00000513806 STAG3L3P0CL85 134 aa8.37□□□□□ -1.07
HTT-213ENST00000513806 ID1P41134 155 aa8.37□□□□□ -1.07
HTT-213ENST00000513806 PSMB3P49720 205 aa8.37□□□□□ -1.07
HTT-213ENST00000513806 ACTL10Q5JWF8 245 aa8.37□□□□□ -1.07
HTT-213ENST00000513806 ALKAL2Q6UX46 152 aa8.37□□□□□ -1.07
HTT-213ENST00000513806 ZNF331Q9NQX6 463 aaPredicted RBP8.37□□□□□ -1.07
HTT-213ENST00000513806 CTXND1A0A1B0GTU2 59 aa8.36□□□□□ -1.07
HTT-213ENST00000513806 NBEAP1P0C6P0 100 aa8.36□□□□□ -1.07
HTT-213ENST00000513806 GCHFRP30047 84 aa8.36□□□□□ -1.07
HTT-213ENST00000513806 MEOX2P50222 304 aa8.36□□□□□ -1.07
HTT-213ENST00000513806 FXYD7P58549 80 aa8.36□□□□□ -1.07
HTT-213ENST00000513806 TAS2R45P59539 299 aa8.36□□□□□ -1.07
HTT-213ENST00000513806 SNRPD3P62318 126 aaKnown RBP8.36□□□□□ -1.07
HTT-213ENST00000513806 RANP62826 216 aaKnown RBP8.36□□□□□ -1.07
HTT-213ENST00000513806 EIF5AP63241 154 aaKnown RBP8.36□□□□□ -1.07
HTT-213ENST00000513806 ZNF738Q8NE65 137 aa8.36□□□□□ -1.07
HTT-213ENST00000513806 MAP1LC3B2A6NCE7 125 aa8.35□□□□□ -1.07
HTT-213ENST00000513806 UBE2G2P60604 165 aa8.35□□□□□ -1.07
HTT-213ENST00000513806 ICAM4Q14773 271 aa8.35□□□□□ -1.07
HTT-213ENST00000513806 PSG3Q16557 428 aa8.35□□□□□ -1.07
HTT-213ENST00000513806 SBSPONQ8IVN8 264 aa8.35□□□□□ -1.07
HTT-213ENST00000513806 SLC50A1Q9BRV3 221 aa8.35□□□□□ -1.07
HTT-213ENST00000513806 MAP1LC3BQ9GZQ8 125 aa8.35□□□□□ -1.07
HTT-213ENST00000513806 RETNQ9HD89 108 aa8.35□□□□□ -1.07
HTT-213ENST00000513806 RNF24Q9Y225 148 aa8.35□□□□□ -1.07
HTT-213ENST00000513806 C4BPBP20851 252 aa8.34□□□□□ -1.07
HTT-213ENST00000513806 SULT1A2P50226 295 aa8.34□□□□□ -1.07
HTT-213ENST00000513806 LINC00322Q6ZN03 302 aaPredicted RBP8.34□□□□□ -1.07
HTT-213ENST00000513806 PQLC2Q6ZP29 291 aa8.34□□□□□ -1.07
HTT-213ENST00000513806 STHQ8IWL8 128 aa8.34□□□□□ -1.07
HTT-213ENST00000513806 OR4B1Q8NGF8 309 aa8.34□□□□□ -1.07
HTT-213ENST00000513806 PCNPQ8WW12 178 aaKnown RBP8.34□□□□□ -1.07
HTT-213ENST00000513806 RPUSD4Q96CM3 377 aaKnown RBP8.34□□□□□ -1.07
HTT-213ENST00000513806 Q9H3A6 140 aa8.34□□□□□ -1.07
HTT-213ENST00000513806 SAV1Q9H4B6 383 aaPredicted RBP8.34□□□□□ -1.07
HTT-213ENST00000513806 RPH3ALQ9UNE2 315 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms