RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 SMIM7Q9BQ49 75 aa7.61□□□□□ -1.19
TPM3-221ENST00000513769 ELOVL1Q9BW60 279 aa7.61□□□□□ -1.19
TPM3-221ENST00000513769 PARLQ9H300 379 aa7.61□□□□□ -1.19
TPM3-221ENST00000513769 OTORQ9NRC9 128 aa7.61□□□□□ -1.19
TPM3-221ENST00000513769 EPDR1Q9UM22 224 aa7.61□□□□□ -1.19
TPM3-221ENST00000513769 KLF12Q9Y4X4 402 aa7.61□□□□□ -1.19
TPM3-221ENST00000513769 YTHDF2Q9Y5A9 579 aaKnown RBP7.61□□□□□ -1.19
TPM3-221ENST00000513769 S4R3C0 116 aa7.61□□□□□ -1.19
TPM3-221ENST00000513769 VPS13CQ709C8 3753 aa7.6□□□□□ -1.19
TPM3-221ENST00000513769 NSD1Q96L73 2696 aaPredicted RBP7.6□□□□□ -1.19
TPM3-221ENST00000513769 FN1P02751 2386 aaKnown RBP7.6□□□□□ -1.19
TPM3-221ENST00000513769 TRBV19A0A075B6N1 114 aa7.6□□□□□ -1.19
TPM3-221ENST00000513769 C7orf77A4D0Y5 90 aa7.6□□□□□ -1.19
TPM3-221ENST00000513769 INAFM1C9JVW0 142 aa7.6□□□□□ -1.19
TPM3-221ENST00000513769 LGALS9O00182 355 aa7.6□□□□□ -1.19
TPM3-221ENST00000513769 IGHV3-23P01764 117 aa7.6□□□□□ -1.19
TPM3-221ENST00000513769 BMI1P35226 326 aa7.6□□□□□ -1.19
TPM3-221ENST00000513769 GALR1P47211 349 aa7.6□□□□□ -1.19
TPM3-221ENST00000513769 RANP62826 216 aaKnown RBP7.6□□□□□ -1.19
TPM3-221ENST00000513769 ZNF329Q86UD4 541 aa7.6□□□□□ -1.19
TPM3-221ENST00000513769 KLHDC1Q8N7A1 406 aa7.6□□□□□ -1.19
TPM3-221ENST00000513769 C5orf17Q8NAS9 161 aa7.6□□□□□ -1.19
TPM3-221ENST00000513769 GRAMD2BQ96HH9 432 aa7.6□□□□□ -1.19
TPM3-221ENST00000513769 GNB4Q9HAV0 340 aa7.6□□□□□ -1.19
TPM3-221ENST00000513769 SMCO4Q9NRQ5 59 aa7.6□□□□□ -1.19
TPM3-221ENST00000513769 C19orf73Q9NVV2 129 aa7.6□□□□□ -1.19
TPM3-221ENST00000513769 A0A087X0K7 114 aa7.59□□□□□ -1.19
TPM3-221ENST00000513769 TRBV6-1A0A0K0K1D8 114 aa7.59□□□□□ -1.19
TPM3-221ENST00000513769 DNAJC9-AS1A6NH13 148 aa7.59□□□□□ -1.19
TPM3-221ENST00000513769 K7EQM0 130 aa7.59□□□□□ -1.19
TPM3-221ENST00000513769 M0R036 132 aa7.59□□□□□ -1.19
TPM3-221ENST00000513769 PPP1R2P9O14990 202 aa7.59□□□□□ -1.19
TPM3-221ENST00000513769 EIF3GO75821 320 aaKnown RBP eCLIP7.59□□□□□ -1.19
TPM3-221ENST00000513769 NDUFA7O95182 113 aa7.59□□□□□ -1.19
TPM3-221ENST00000513769 MT-ND4LP03901 98 aa7.59□□□□□ -1.19
TPM3-221ENST00000513769 PYYP10082 97 aa7.59□□□□□ -1.19
TPM3-221ENST00000513769 ATP5G3P48201 142 aa7.59□□□□□ -1.19
TPM3-221ENST00000513769 SAMD13Q5VXD3 122 aa7.59□□□□□ -1.19
TPM3-221ENST00000513769 Q6ZSV7 163 aa7.59□□□□□ -1.19
TPM3-221ENST00000513769 AAMDCQ9H7C9 122 aa7.59□□□□□ -1.19
TPM3-221ENST00000513769 BIN3Q9NQY0 253 aa7.59□□□□□ -1.19
TPM3-221ENST00000513769 ZNF586Q9NXT0 402 aa7.59□□□□□ -1.19
TPM3-221ENST00000513769 A0A1B0GUS0 222 aa7.58□□□□□ -1.2
TPM3-221ENST00000513769 CLPSL1A2RUU4 121 aa7.58□□□□□ -1.2
TPM3-221ENST00000513769 TSPAN4O14817 238 aa7.58□□□□□ -1.2
TPM3-221ENST00000513769 LGALS1P09382 135 aaKnown RBP7.58□□□□□ -1.2
TPM3-221ENST00000513769 CEBPGP53567 150 aa7.58□□□□□ -1.2
TPM3-221ENST00000513769 BTN1A1Q13410 526 aa7.58□□□□□ -1.2
TPM3-221ENST00000513769 TMEM183BQ1AE95 376 aa7.58□□□□□ -1.2
TPM3-221ENST00000513769 C16orf54Q6UWD8 224 aa7.58□□□□□ -1.2
TPM3-221ENST00000513769 IL17RELQ6ZVW7 336 aa7.58□□□□□ -1.2
TPM3-221ENST00000513769 CMTM2Q8TAZ6 248 aa7.58□□□□□ -1.2
TPM3-221ENST00000513769 C2CD4CQ8TF44 421 aa7.58□□□□□ -1.2
TPM3-221ENST00000513769 IMMP2LQ96T52 175 aa7.58□□□□□ -1.2
TPM3-221ENST00000513769 SLC50A1Q9BRV3 221 aa7.58□□□□□ -1.2
TPM3-221ENST00000513769 Q9H3A6 140 aa7.58□□□□□ -1.2
TPM3-221ENST00000513769 RPS10P5Q9NQ39 176 aa7.58□□□□□ -1.2
TPM3-221ENST00000513769 UFC1Q9Y3C8 167 aa7.58□□□□□ -1.2
TPM3-221ENST00000513769 DNHD1Q96M86 4753 aa7.57□□□□□ -1.2
TPM3-221ENST00000513769 HIVEP2P31629 2446 aa7.57□□□□□ -1.2
TPM3-221ENST00000513769 ZNF785A8K8V0 405 aa7.57□□□□□ -1.2
TPM3-221ENST00000513769 GGTLC3B5MD39 225 aa7.57□□□□□ -1.2
TPM3-221ENST00000513769 PPP5D1E7EU14 171 aa7.57□□□□□ -1.2
TPM3-221ENST00000513769 RPL35P42766 123 aaKnown RBP7.57□□□□□ -1.2
TPM3-221ENST00000513769 CSN1S1P47710 185 aa7.57□□□□□ -1.2
TPM3-221ENST00000513769 CNN1P51911 297 aaKnown RBP7.57□□□□□ -1.2
TPM3-221ENST00000513769 RPL23P62829 140 aaKnown RBP7.57□□□□□ -1.2
TPM3-221ENST00000513769 ATRAIDQ6UW56 229 aa7.57□□□□□ -1.2
TPM3-221ENST00000513769 OCC1Q8TAD7 63 aa7.57□□□□□ -1.2
TPM3-221ENST00000513769 WIPF2Q8TF74 440 aaPredicted RBP7.57□□□□□ -1.2
TPM3-221ENST00000513769 BLNKQ8WV28 456 aa7.57□□□□□ -1.2
TPM3-221ENST00000513769 FMC1Q96HJ9 113 aa7.57□□□□□ -1.2
TPM3-221ENST00000513769 BTF3L4Q96K17 158 aa7.57□□□□□ -1.2
TPM3-221ENST00000513769 ATG101Q9BSB4 218 aa7.57□□□□□ -1.2
TPM3-221ENST00000513769 ESM1Q9NQ30 184 aa7.57□□□□□ -1.2
TPM3-221ENST00000513769 DAZ1Q9NQZ3 744 aaKnown RBP7.57□□□□□ -1.2
TPM3-221ENST00000513769 ZFP30Q9Y2G7 519 aa7.57□□□□□ -1.2
TPM3-221ENST00000513769 CRLF1O75462 422 aa7.56□□□□□ -1.2
TPM3-221ENST00000513769 TCRAP04437 139 aa7.56□□□□□ -1.2
TPM3-221ENST00000513769 SLC25A5P05141 298 aaKnown RBP7.56□□□□□ -1.2
TPM3-221ENST00000513769 GNG4P50150 75 aa7.56□□□□□ -1.2
TPM3-221ENST00000513769 ZNF674Q2M3X9 581 aa7.56□□□□□ -1.2
TPM3-221ENST00000513769 RPEL1Q2QD12 228 aa7.56□□□□□ -1.2
TPM3-221ENST00000513769 AWAT1Q58HT5 328 aa7.56□□□□□ -1.2
TPM3-221ENST00000513769 LEMD1Q68G75 181 aa7.56□□□□□ -1.2
TPM3-221ENST00000513769 REC114Q7Z4M0 266 aa7.56□□□□□ -1.2
TPM3-221ENST00000513769 LINC01551Q86U37 167 aa7.56□□□□□ -1.2
TPM3-221ENST00000513769 C15orf54Q8N8G6 183 aa7.56□□□□□ -1.2
TPM3-221ENST00000513769 MRPL53Q96EL3 112 aaKnown RBP7.56□□□□□ -1.2
TPM3-221ENST00000513769 SMPXQ9UHP9 88 aa7.56□□□□□ -1.2
TPM3-221ENST00000513769 SMAD5-AS1Q9Y6J3 95 aa7.56□□□□□ -1.2
TPM3-221ENST00000513769 COL6A5A8TX70 2615 aa7.55□□□□□ -1.2
TPM3-221ENST00000513769 IGHV7-4-1A0A0J9YVY3 117 aa7.55□□□□□ -1.2
TPM3-221ENST00000513769 ZNF320A2RRD8 509 aa7.55□□□□□ -1.2
TPM3-221ENST00000513769 RBAKDNA6NC62 111 aa7.55□□□□□ -1.2
TPM3-221ENST00000513769 DNASE2O00115 360 aaPredicted RBP7.55□□□□□ -1.2
TPM3-221ENST00000513769 PEX7O00628 323 aa7.55□□□□□ -1.2
TPM3-221ENST00000513769 TCF21O43680 179 aa7.55□□□□□ -1.2
TPM3-221ENST00000513769 GCGP01275 180 aa7.55□□□□□ -1.2
TPM3-221ENST00000513769 IGHV3-11P01762 117 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms