RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 RAB3DO95716 219 aa7.38□□□□□ -1.23
DDX41-216ENST00000513562 PRB4P10163 310 aaPredicted RBP7.38□□□□□ -1.23
DDX41-216ENST00000513562 RPL7P18124 248 aaKnown RBP7.38□□□□□ -1.23
DDX41-216ENST00000513562 SURF2Q15527 256 aaPredicted RBP7.38□□□□□ -1.23
DDX41-216ENST00000513562 TMEM229BQ8NBD8 167 aa7.38□□□□□ -1.23
DDX41-216ENST00000513562 OR1S1Q8NH92 325 aa7.38□□□□□ -1.23
DDX41-216ENST00000513562 RPUSD4Q96CM3 377 aaKnown RBP7.38□□□□□ -1.23
DDX41-216ENST00000513562 SHANK2-AS3Q9BTD1 123 aa7.38□□□□□ -1.23
DDX41-216ENST00000513562 LY96Q9Y6Y9 160 aa7.38□□□□□ -1.23
DDX41-216ENST00000513562 TRGV2A0A075B6R0 118 aa7.37□□□□□ -1.23
DDX41-216ENST00000513562 PRSS46E5RG02 174 aa7.37□□□□□ -1.23
DDX41-216ENST00000513562 TAS2R19P59542 299 aa7.37□□□□□ -1.23
DDX41-216ENST00000513562 LSM3P62310 102 aaKnown RBP7.37□□□□□ -1.23
DDX41-216ENST00000513562 RAB11AP62491 216 aa7.37□□□□□ -1.23
DDX41-216ENST00000513562 STEAP1BQ6NZ63 245 aa7.37□□□□□ -1.23
DDX41-216ENST00000513562 LYPD5Q6UWN5 251 aa7.37□□□□□ -1.23
DDX41-216ENST00000513562 LINC00528Q8N1L1 170 aa7.37□□□□□ -1.23
DDX41-216ENST00000513562 PARD6GQ9BYG4 376 aaPredicted RBP7.37□□□□□ -1.23
DDX41-216ENST00000513562 PRR13Q9NZ81 148 aa7.37□□□□□ -1.23
DDX41-216ENST00000513562 A0A0B4J2A0 478 aa7.36□□□□□ -1.23
DDX41-216ENST00000513562 LRCOL1A6NCL2 159 aa7.36□□□□□ -1.23
DDX41-216ENST00000513562 PAX4O43316 350 aa7.36□□□□□ -1.23
DDX41-216ENST00000513562 ZNF324O75467 553 aaPredicted RBP7.36□□□□□ -1.23
DDX41-216ENST00000513562 C1QBP02746 253 aa7.36□□□□□ -1.23
DDX41-216ENST00000513562 FAAP20Q6NZ36 180 aa7.36□□□□□ -1.23
DDX41-216ENST00000513562 LYZL2Q7Z4W2 148 aa7.36□□□□□ -1.23
DDX41-216ENST00000513562 PYGO2Q9BRQ0 406 aa7.36□□□□□ -1.23
DDX41-216ENST00000513562 SHPKQ9UHJ6 478 aa7.36□□□□□ -1.23
DDX41-216ENST00000513562 GPR132Q9UNW8 380 aa7.36□□□□□ -1.23
DDX41-216ENST00000513562 RNF213Q63HN8 5207 aa7.36□□□□□ -1.23
DDX41-216ENST00000513562 OXTP01178 125 aa7.35□□□□□ -1.23
DDX41-216ENST00000513562 CXCL2P19875 107 aa7.35□□□□□ -1.23
DDX41-216ENST00000513562 EVI2AP22794 236 aa7.35□□□□□ -1.23
DDX41-216ENST00000513562 RAP2BP61225 183 aa7.35□□□□□ -1.23
DDX41-216ENST00000513562 C11orf72Q8NBR9 251 aa7.35□□□□□ -1.23
DDX41-216ENST00000513562 LRRC20Q8TCA0 184 aa7.35□□□□□ -1.23
DDX41-216ENST00000513562 YIPF6Q96EC8 236 aa7.35□□□□□ -1.23
DDX41-216ENST00000513562 FUT9Q9Y231 359 aa7.35□□□□□ -1.23
DDX41-216ENST00000513562 HIGD1AQ9Y241 93 aa7.35□□□□□ -1.23
DDX41-216ENST00000513562 TRGV1A0A0A0MS02 117 aa7.34□□□□□ -1.23
DDX41-216ENST00000513562 MRPS12O15235 138 aaKnown RBP7.34□□□□□ -1.23
DDX41-216ENST00000513562 PITX3O75364 302 aa7.34□□□□□ -1.23
DDX41-216ENST00000513562 IAPPP10997 89 aa7.34□□□□□ -1.23
DDX41-216ENST00000513562 AKR1C4P17516 323 aa7.34□□□□□ -1.23
DDX41-216ENST00000513562 Q6ZSA8 131 aa7.34□□□□□ -1.23
DDX41-216ENST00000513562 CCDC190Q86UF4 302 aa7.34□□□□□ -1.23
DDX41-216ENST00000513562 WFDC10BQ8IUB3 73 aa7.34□□□□□ -1.23
DDX41-216ENST00000513562 Q8N814 137 aa7.34□□□□□ -1.23
DDX41-216ENST00000513562 ZNF680Q8NEM1 530 aa7.34□□□□□ -1.23
DDX41-216ENST00000513562 ST6GAL2Q96JF0 529 aa7.34□□□□□ -1.23
DDX41-216ENST00000513562 ODF3Q96PU9 254 aa7.34□□□□□ -1.23
DDX41-216ENST00000513562 ZNF331Q9NQX6 463 aaPredicted RBP7.34□□□□□ -1.23
DDX41-216ENST00000513562 GSN-AS1Q9NRJ2 163 aa7.34□□□□□ -1.23
DDX41-216ENST00000513562 PRO0255Q9UI72 69 aa7.34□□□□□ -1.23
DDX41-216ENST00000513562 PAIP2BQ9ULR5 123 aaKnown RBP7.34□□□□□ -1.23
DDX41-216ENST00000513562 KCNIP3Q9Y2W7 256 aa7.34□□□□□ -1.23
DDX41-216ENST00000513562 TRAV12-3A0A0B4J271 114 aa7.33□□□□□ -1.24
DDX41-216ENST00000513562 PMS2P5A8MQ11 134 aa7.33□□□□□ -1.24
DDX41-216ENST00000513562 FAM25AB3EWG3 89 aa7.33□□□□□ -1.24
DDX41-216ENST00000513562 FAM25CB3EWG5 89 aa7.33□□□□□ -1.24
DDX41-216ENST00000513562 FAM25GB3EWG6 89 aa7.33□□□□□ -1.24
DDX41-216ENST00000513562 PRAC2D3DTV9 90 aa7.33□□□□□ -1.24
DDX41-216ENST00000513562 SPINK4O60575 86 aa7.33□□□□□ -1.24
DDX41-216ENST00000513562 HYPMO75409 117 aa7.33□□□□□ -1.24
DDX41-216ENST00000513562 CRYBA4P53673 196 aa7.33□□□□□ -1.24
DDX41-216ENST00000513562 PLP1P60201 277 aa7.33□□□□□ -1.24
DDX41-216ENST00000513562 AKR1C1Q04828 323 aa7.33□□□□□ -1.24
DDX41-216ENST00000513562 MRPL23Q16540 153 aaKnown RBP7.33□□□□□ -1.24
DDX41-216ENST00000513562 LCN15Q6UWW0 184 aa7.33□□□□□ -1.24
DDX41-216ENST00000513562 CYP2G1PQ6ZSU1 146 aa7.33□□□□□ -1.24
DDX41-216ENST00000513562 ACOT7LQ6ZUV0 252 aa7.33□□□□□ -1.24
DDX41-216ENST00000513562 NEGR1Q7Z3B1 354 aa7.33□□□□□ -1.24
DDX41-216ENST00000513562 C10orf126Q8N4M7 172 aa7.33□□□□□ -1.24
DDX41-216ENST00000513562 ZNF431Q8TF32 576 aaPredicted RBP7.33□□□□□ -1.24
DDX41-216ENST00000513562 EXTL2Q9UBQ6 330 aa7.33□□□□□ -1.24
DDX41-216ENST00000513562 LINC00854A0A1B0GVQ3 168 aa7.32□□□□□ -1.24
DDX41-216ENST00000513562 DISC1C4P0D8 188 aa7.32□□□□□ -1.24
DDX41-216ENST00000513562 J3KRW8 73 aa7.32□□□□□ -1.24
DDX41-216ENST00000513562 IL5P05113 134 aa7.32□□□□□ -1.24
DDX41-216ENST00000513562 CRYGDP07320 174 aa7.32□□□□□ -1.24
DDX41-216ENST00000513562 LINC00869P0C866 280 aa7.32□□□□□ -1.24
DDX41-216ENST00000513562 LEPP41159 167 aa7.32□□□□□ -1.24
DDX41-216ENST00000513562 KRTAP10-4P60372 401 aaPredicted RBP7.32□□□□□ -1.24
DDX41-216ENST00000513562 NCS1P62166 190 aa7.32□□□□□ -1.24
DDX41-216ENST00000513562 SSBP1Q04837 148 aaKnown RBP7.32□□□□□ -1.24
DDX41-216ENST00000513562 SLAQ13239 276 aa7.32□□□□□ -1.24
DDX41-216ENST00000513562 C15orf40Q8WUR7 153 aa7.32□□□□□ -1.24
DDX41-216ENST00000513562 SLC50A1Q9BRV3 221 aa7.32□□□□□ -1.24
DDX41-216ENST00000513562 VCX3AQ9NNX9 186 aa7.32□□□□□ -1.24
DDX41-216ENST00000513562 PSCAO43653 123 aa7.31□□□□□ -1.24
DDX41-216ENST00000513562 IGHV3-53P01767 116 aa7.31□□□□□ -1.24
DDX41-216ENST00000513562 OR5G3P0C626 314 aa7.31□□□□□ -1.24
DDX41-216ENST00000513562 CT45A10P0DMU9 189 aa7.31□□□□□ -1.24
DDX41-216ENST00000513562 TCL1AP56279 114 aa7.31□□□□□ -1.24
DDX41-216ENST00000513562 RPP30P78346 268 aaKnown RBP7.31□□□□□ -1.24
DDX41-216ENST00000513562 SRPXP78539 464 aa7.31□□□□□ -1.24
DDX41-216ENST00000513562 ANXA2RQ3ZCQ2 193 aa7.31□□□□□ -1.24
DDX41-216ENST00000513562 TEPPQ6URK8 271 aa7.31□□□□□ -1.24
DDX41-216ENST00000513562 S100A7AQ86SG5 101 aa7.31□□□□□ -1.24
DDX41-216ENST00000513562 ZBTB8BQ8NAP8 495 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms