RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 FUSP35637 526 aaKnown RBP eCLIP6.67□□□□□ -1.34
TCOF1-212ENST00000513538 KIR3DS1Q14943 382 aa6.67□□□□□ -1.34
TCOF1-212ENST00000513538 CNPY1Q3B7I2 92 aa6.67□□□□□ -1.34
TCOF1-212ENST00000513538 RNASE8Q8TDE3 154 aaKnown RBP6.67□□□□□ -1.34
TCOF1-212ENST00000513538 Q9H3A6 140 aa6.67□□□□□ -1.34
TCOF1-212ENST00000513538 SLC45A2Q9UMX9 530 aa6.67□□□□□ -1.34
TCOF1-212ENST00000513538 HERC1Q15751 4861 aa6.67□□□□□ -1.34
TCOF1-212ENST00000513538 DNAH5Q8TE73 4624 aa6.67□□□□□ -1.34
TCOF1-212ENST00000513538 TRAV26-1A0A087WT03 109 aa6.66□□□□□ -1.34
TCOF1-212ENST00000513538 LINC00854A0A1B0GVQ3 168 aa6.66□□□□□ -1.34
TCOF1-212ENST00000513538 H3BRN7 92 aa6.66□□□□□ -1.34
TCOF1-212ENST00000513538 HTN1P15515 57 aa6.66□□□□□ -1.34
TCOF1-212ENST00000513538 ORM2P19652 201 aa6.66□□□□□ -1.34
TCOF1-212ENST00000513538 BTF3P20290 206 aaKnown RBP6.66□□□□□ -1.34
TCOF1-212ENST00000513538 HOXA5P20719 270 aa6.66□□□□□ -1.34
TCOF1-212ENST00000513538 INPP1P49441 399 aa6.66□□□□□ -1.34
TCOF1-212ENST00000513538 TAS2R60P59551 318 aa6.66□□□□□ -1.34
TCOF1-212ENST00000513538 B2MP61769 119 aa6.66□□□□□ -1.34
TCOF1-212ENST00000513538 POLR2GP62487 172 aaKnown RBP eCLIP6.66□□□□□ -1.34
TCOF1-212ENST00000513538 DLK1P80370 383 aa6.66□□□□□ -1.34
TCOF1-212ENST00000513538 HIST1H1AQ02539 215 aaPredicted RBP6.66□□□□□ -1.34
TCOF1-212ENST00000513538 CLINT1Q14677 625 aa6.66□□□□□ -1.34
TCOF1-212ENST00000513538 ESRGQ1W209 222 aa6.66□□□□□ -1.34
TCOF1-212ENST00000513538 TMEM14EPQ6UXP3 125 aa6.66□□□□□ -1.34
TCOF1-212ENST00000513538 Q6ZRN7 208 aaPredicted RBP6.66□□□□□ -1.34
TCOF1-212ENST00000513538 LINC00299Q6ZSB3 139 aa6.66□□□□□ -1.34
TCOF1-212ENST00000513538 LINC00612Q8N6U2 182 aa6.66□□□□□ -1.34
TCOF1-212ENST00000513538 ZNF738Q8NE65 137 aa6.66□□□□□ -1.34
TCOF1-212ENST00000513538 OR1B1Q8NGR6 318 aa6.66□□□□□ -1.34
TCOF1-212ENST00000513538 MITD1Q8WV92 249 aa6.66□□□□□ -1.34
TCOF1-212ENST00000513538 C16orf74Q96GX8 76 aa6.66□□□□□ -1.34
TCOF1-212ENST00000513538 SMIM8Q96KF7 97 aa6.66□□□□□ -1.34
TCOF1-212ENST00000513538 LINC01587Q99440 93 aa6.66□□□□□ -1.34
TCOF1-212ENST00000513538 UPK3BQ9BT76 320 aa6.66□□□□□ -1.34
TCOF1-212ENST00000513538 NOP10Q9NPE3 64 aaKnown RBP6.66□□□□□ -1.34
TCOF1-212ENST00000513538 PAIP2BQ9ULR5 123 aaKnown RBP6.66□□□□□ -1.34
TCOF1-212ENST00000513538 DMBT1Q9UGM3 2413 aaPredicted RBP6.66□□□□□ -1.34
TCOF1-212ENST00000513538 CENPXA8MT69 81 aa6.65□□□□□ -1.34
TCOF1-212ENST00000513538 H3BP45 60 aa6.65□□□□□ -1.34
TCOF1-212ENST00000513538 LYRM1O43325 122 aa6.65□□□□□ -1.34
TCOF1-212ENST00000513538 CFDP00746 253 aaPredicted RBP6.65□□□□□ -1.34
TCOF1-212ENST00000513538 CXCL3P19876 107 aa6.65□□□□□ -1.34
TCOF1-212ENST00000513538 RPP30P78346 268 aaKnown RBP6.65□□□□□ -1.34
TCOF1-212ENST00000513538 FGL1Q08830 312 aa6.65□□□□□ -1.34
TCOF1-212ENST00000513538 TTC32Q5I0X7 151 aa6.65□□□□□ -1.34
TCOF1-212ENST00000513538 SPANXN5Q5MJ07 72 aa6.65□□□□□ -1.34
TCOF1-212ENST00000513538 TMEM144Q7Z5S9 345 aa6.65□□□□□ -1.34
TCOF1-212ENST00000513538 OR8A1Q8NGG7 326 aa6.65□□□□□ -1.34
TCOF1-212ENST00000513538 SHANK2-AS3Q9BTD1 123 aa6.65□□□□□ -1.34
TCOF1-212ENST00000513538 TMEM147Q9BVK8 224 aa6.65□□□□□ -1.34
TCOF1-212ENST00000513538 PARD6GQ9BYG4 376 aaPredicted RBP6.65□□□□□ -1.34
TCOF1-212ENST00000513538 ZNF586Q9NXT0 402 aa6.65□□□□□ -1.34
TCOF1-212ENST00000513538 PSENENQ9NZ42 101 aa6.65□□□□□ -1.34
TCOF1-212ENST00000513538 STRAPQ9Y3F4 350 aaKnown RBP6.65□□□□□ -1.34
TCOF1-212ENST00000513538 TIMM8BQ9Y5J9 83 aaPredicted RBP6.65□□□□□ -1.34
TCOF1-212ENST00000513538 A0A0J9YY99 117 aa6.64□□□□□ -1.35
TCOF1-212ENST00000513538 EPM2AB3EWF7 344 aa6.64□□□□□ -1.35
TCOF1-212ENST00000513538 MRPS12O15235 138 aaKnown RBP6.64□□□□□ -1.35
TCOF1-212ENST00000513538 CCNKO75909 580 aa6.64□□□□□ -1.35
TCOF1-212ENST00000513538 TCRBP04435 133 aa6.64□□□□□ -1.35
TCOF1-212ENST00000513538 PLP1P60201 277 aa6.64□□□□□ -1.35
TCOF1-212ENST00000513538 OR5I1Q13606 314 aa6.64□□□□□ -1.35
TCOF1-212ENST00000513538 C4orf46Q504U0 113 aa6.64□□□□□ -1.35
TCOF1-212ENST00000513538 ACOT7LQ6ZUV0 252 aa6.64□□□□□ -1.35
TCOF1-212ENST00000513538 TMEM256Q8N2U0 113 aa6.64□□□□□ -1.35
TCOF1-212ENST00000513538 ZBTB8BQ8NAP8 495 aaPredicted RBP6.64□□□□□ -1.35
TCOF1-212ENST00000513538 BPIFCQ8NFQ6 507 aa6.64□□□□□ -1.35
TCOF1-212ENST00000513538 RXFP4Q8TDU9 374 aa6.64□□□□□ -1.35
TCOF1-212ENST00000513538 TMEM263Q8WUH6 116 aaKnown RBP6.64□□□□□ -1.35
TCOF1-212ENST00000513538 GNPNAT1Q96EK6 184 aaPredicted RBP6.64□□□□□ -1.35
TCOF1-212ENST00000513538 GPR82Q96P67 336 aa6.64□□□□□ -1.35
TCOF1-212ENST00000513538 C20orf85Q9H1P6 137 aa6.64□□□□□ -1.35
TCOF1-212ENST00000513538 C11orf1Q9H5F2 150 aa6.64□□□□□ -1.35
TCOF1-212ENST00000513538 RCL1Q9Y2P8 373 aaKnown RBP6.64□□□□□ -1.35
TCOF1-212ENST00000513538 MRPS16Q9Y3D3 137 aaKnown RBP6.64□□□□□ -1.35
TCOF1-212ENST00000513538 A0A087X0K7 114 aa6.63□□□□□ -1.35
TCOF1-212ENST00000513538 FNDC10F2Z333 226 aa6.63□□□□□ -1.35
TCOF1-212ENST00000513538 K7EPK0 472 aa6.63□□□□□ -1.35
TCOF1-212ENST00000513538 S100A7P31151 101 aa6.63□□□□□ -1.35
TCOF1-212ENST00000513538 XGP55808 180 aa6.63□□□□□ -1.35
TCOF1-212ENST00000513538 LINC00315P59091 139 aa6.63□□□□□ -1.35
TCOF1-212ENST00000513538 TAS2R30P59541 319 aa6.63□□□□□ -1.35
TCOF1-212ENST00000513538 RHOBP62745 196 aa6.63□□□□□ -1.35
TCOF1-212ENST00000513538 AKR1C1Q04828 323 aa6.63□□□□□ -1.35
TCOF1-212ENST00000513538 ARL16Q0P5N6 197 aa6.63□□□□□ -1.35
TCOF1-212ENST00000513538 IL15RAQ13261 267 aa6.63□□□□□ -1.35
TCOF1-212ENST00000513538 PSG3Q16557 428 aa6.63□□□□□ -1.35
TCOF1-212ENST00000513538 IAH1Q2TAA2 248 aaPredicted RBP6.63□□□□□ -1.35
TCOF1-212ENST00000513538 FLG2Q5D862 2391 aaPredicted RBP6.63□□□□□ -1.35
TCOF1-212ENST00000513538 ZNF503Q96F45 646 aa6.63□□□□□ -1.35
TCOF1-212ENST00000513538 CCDC32Q9BV29 185 aa6.63□□□□□ -1.35
TCOF1-212ENST00000513538 A0A1W2PPQ1 181 aa6.62□□□□□ -1.35
TCOF1-212ENST00000513538 C7orf66A4D0T2 115 aa6.62□□□□□ -1.35
TCOF1-212ENST00000513538 A6NHS1 94 aa6.62□□□□□ -1.35
TCOF1-212ENST00000513538 SSSCA1O60232 199 aa6.62□□□□□ -1.35
TCOF1-212ENST00000513538 TSC22D2O75157 780 aa6.62□□□□□ -1.35
TCOF1-212ENST00000513538 MBPP02686 304 aaPredicted RBP6.62□□□□□ -1.35
TCOF1-212ENST00000513538 INAFM2P0DMQ5 153 aa6.62□□□□□ -1.35
TCOF1-212ENST00000513538 RPL7P18124 248 aaKnown RBP6.62□□□□□ -1.35
TCOF1-212ENST00000513538 M6PRP20645 277 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms