RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 LYNX1G3V0Z9 82 aa9.16□□□□□ -0.94
TCOF1-211ENST00000513346 LYNX1P0DP58 116 aa9.16□□□□□ -0.94
TCOF1-211ENST00000513346 TRAV8-4A0A0B4J246 113 aa9.15□□□□□ -0.94
TCOF1-211ENST00000513346 MYOD1P15172 320 aa9.15□□□□□ -0.94
TCOF1-211ENST00000513346 EXOC3-AS1Q8N2X6 119 aa9.15□□□□□ -0.94
TCOF1-211ENST00000513346 DENND4CQ5VZ89 1909 aa9.15□□□□□ -0.94
TCOF1-211ENST00000513346 WIPF2Q8TF74 440 aaPredicted RBP9.15□□□□□ -0.94
TCOF1-211ENST00000513346 EEF1AKMT3Q96AZ1 226 aa9.15□□□□□ -0.94
TCOF1-211ENST00000513346 ASCL2Q99929 193 aa9.15□□□□□ -0.94
TCOF1-211ENST00000513346 LY6G6EA0A0G2JKS1 128 aa9.15□□□□□ -0.95
TCOF1-211ENST00000513346 M0R381 172 aa9.15□□□□□ -0.95
TCOF1-211ENST00000513346 U3KQA8 63 aa9.15□□□□□ -0.95
TCOF1-211ENST00000513346 NAV3Q8IVL0 2385 aa9.15□□□□□ -0.95
TCOF1-211ENST00000513346 TRAV8-1A0A0A6YYK1 113 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 TAX1BP3O14907 124 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 B3GALT5-AS1P59052 145 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 MLANAQ16655 118 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 LGALS9BQ3B8N2 356 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 ORMDL2Q53FV1 153 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 LGALS9CQ6DKI2 356 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 LHFPL4Q7Z7J7 247 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 PGPEP1Q9NXJ5 209 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 PLXNB3Q9ULL4 1909 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 J3QKU1 62 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 ARMS2P0C7Q2 107 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 PRTN3P24158 256 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 ANKRD39Q53RE8 183 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 RNFT1Q5M7Z0 435 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 PVRIGQ6DKI7 326 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 ARPC1AQ92747 370 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 C11orf1Q9H5F2 150 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 SIVA1O15304 175 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 TRGV3P03979 118 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 RNASE2P10153 161 aaKnown RBP9.14□□□□□ -0.95
TCOF1-211ENST00000513346 CD24P25063 80 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 CIRBPQ14011 172 aaKnown RBP9.14□□□□□ -0.95
TCOF1-211ENST00000513346 RNF125Q96EQ8 232 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 TRGV9Q99603 122 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 SLC25A39Q9BZJ4 359 aaPredicted RBP9.14□□□□□ -0.95
TCOF1-211ENST00000513346 METRNQ9UJH8 293 aa9.14□□□□□ -0.95
TCOF1-211ENST00000513346 IGHV3OR16-13A0A075B7E8 117 aa9.13□□□□□ -0.95
TCOF1-211ENST00000513346 IGHV3-74A0A0B4J1X5 117 aa9.13□□□□□ -0.95
TCOF1-211ENST00000513346 IGHV1-46P01743 117 aa9.13□□□□□ -0.95
TCOF1-211ENST00000513346 PLNP26678 52 aa9.13□□□□□ -0.95
TCOF1-211ENST00000513346 RBX1P62877 108 aa9.13□□□□□ -0.95
TCOF1-211ENST00000513346 LAGE3Q14657 143 aa9.13□□□□□ -0.95
TCOF1-211ENST00000513346 AMN1Q8IY45 258 aa9.13□□□□□ -0.95
TCOF1-211ENST00000513346 VGLL1Q99990 258 aa9.13□□□□□ -0.95
TCOF1-211ENST00000513346 SRRM5B3KS81 715 aa9.13□□□□□ -0.95
TCOF1-211ENST00000513346 THBDP07204 575 aa9.13□□□□□ -0.95
TCOF1-211ENST00000513346 C10orf55Q5SWW7 151 aa9.13□□□□□ -0.95
TCOF1-211ENST00000513346 SPANXA1Q9NS26 97 aa9.13□□□□□ -0.95
TCOF1-211ENST00000513346 Q8NFD4 153 aa9.13□□□□□ -0.95
TCOF1-211ENST00000513346 RPUSD1Q9UJJ7 312 aaKnown RBP9.13□□□□□ -0.95
TCOF1-211ENST00000513346 MKI67P46013 3256 aaKnown RBP9.13□□□□□ -0.95
TCOF1-211ENST00000513346 GNLYP22749 145 aa9.12□□□□□ -0.95
TCOF1-211ENST00000513346 Q86TA4 180 aa9.12□□□□□ -0.95
TCOF1-211ENST00000513346 CD177Q8N6Q3 437 aa9.12□□□□□ -0.95
TCOF1-211ENST00000513346 SYT8Q8NBV8 401 aa9.12□□□□□ -0.95
TCOF1-211ENST00000513346 DDB2Q92466 427 aa9.12□□□□□ -0.95
TCOF1-211ENST00000513346 JMJD8Q96S16 334 aa9.12□□□□□ -0.95
TCOF1-211ENST00000513346 IGLC1P0CG04 106 aa9.12□□□□□ -0.95
TCOF1-211ENST00000513346 PLA2G5P39877 138 aa9.12□□□□□ -0.95
TCOF1-211ENST00000513346 PRB3Q04118 309 aaPredicted RBP9.12□□□□□ -0.95
TCOF1-211ENST00000513346 S4R3C0 116 aa9.12□□□□□ -0.95
TCOF1-211ENST00000513346 PMS2P5A8MQ11 134 aa9.12□□□□□ -0.95
TCOF1-211ENST00000513346 NPIPB5A8MRT5 1133 aa9.12□□□□□ -0.95
TCOF1-211ENST00000513346 PRSS57Q6UWY2 283 aa9.12□□□□□ -0.95
TCOF1-211ENST00000513346 IGHV4-39P01824 125 aa9.12□□□□□ -0.95
TCOF1-211ENST00000513346 PPIFP30405 207 aaKnown RBP9.12□□□□□ -0.95
TCOF1-211ENST00000513346 ZNF562Q6V9R5 426 aa9.12□□□□□ -0.95
TCOF1-211ENST00000513346 COPS9Q8WXC6 57 aa9.12□□□□□ -0.95
TCOF1-211ENST00000513346 C21orf62Q9NYP8 219 aa9.12□□□□□ -0.95
TCOF1-211ENST00000513346 NPIPB6E9PJ23 425 aa9.11□□□□□ -0.95
TCOF1-211ENST00000513346 H0YJW9 148 aa9.11□□□□□ -0.95
TCOF1-211ENST00000513346 SSBP2P81877 361 aaPredicted RBP9.11□□□□□ -0.95
TCOF1-211ENST00000513346 TMEM158Q8WZ71 300 aa9.11□□□□□ -0.95
TCOF1-211ENST00000513346 TMEM133Q9H2Q1 129 aa9.11□□□□□ -0.95
TCOF1-211ENST00000513346 ERG28Q9UKR5 140 aa9.11□□□□□ -0.95
TCOF1-211ENST00000513346 GTF3C1Q12789 2109 aa9.11□□□□□ -0.95
TCOF1-211ENST00000513346 IGHV3OR16-12A0A075B7B8 117 aa9.11□□□□□ -0.95
TCOF1-211ENST00000513346 WNT2P09544 360 aa9.11□□□□□ -0.95
TCOF1-211ENST00000513346 ASIPP42127 132 aa9.11□□□□□ -0.95
TCOF1-211ENST00000513346 SLC25A15Q9Y619 301 aa9.11□□□□□ -0.95
TCOF1-211ENST00000513346 BRCA2P51587 3418 aa9.11□□□□□ -0.95
TCOF1-211ENST00000513346 PPP1R27Q86WC6 154 aa9.11□□□□□ -0.95
TCOF1-211ENST00000513346 TMEM167AQ8TBQ9 72 aa9.11□□□□□ -0.95
TCOF1-211ENST00000513346 TMEM14BQ9NUH8 114 aa9.11□□□□□ -0.95
TCOF1-211ENST00000513346 TEX48A0A1B0GUV7 120 aa9.11□□□□□ -0.95
TCOF1-211ENST00000513346 IGHG3P01860 377 aa9.11□□□□□ -0.95
TCOF1-211ENST00000513346 DSCR9P59020 149 aa9.11□□□□□ -0.95
TCOF1-211ENST00000513346 MBD3L4A6NDZ8 208 aaPredicted RBP9.1□□□□□ -0.95
TCOF1-211ENST00000513346 MBD3L3A6NE82 208 aaPredicted RBP9.1□□□□□ -0.95
TCOF1-211ENST00000513346 MBD3L5A6NJ08 208 aaPredicted RBP9.1□□□□□ -0.95
TCOF1-211ENST00000513346 H7C1H1 209 aa9.1□□□□□ -0.95
TCOF1-211ENST00000513346 CFHR2P36980 270 aa9.1□□□□□ -0.95
TCOF1-211ENST00000513346 MBD3L2Q8NHZ7 208 aaPredicted RBP9.1□□□□□ -0.95
TCOF1-211ENST00000513346 PPDPFLQ8WWR9 84 aa9.1□□□□□ -0.95
TCOF1-211ENST00000513346 IGHV3-49A0A0A0MS15 119 aa9.1□□□□□ -0.95
TCOF1-211ENST00000513346 SMKR1H3BMG3 65 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 909.2 ms